View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19065_high_21 (Length: 262)
Name: NF19065_high_21
Description: NF19065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19065_high_21 |
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Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 49770524 - 49770749
Alignment:
| Q |
18 |
tagggagacatgactgagaatcatgaagagataatgtacggtcataattgtatttggtatgaagtgacctgatgtctaagttgagttaaagtcttgattt |
117 |
Q |
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| T |
49770524 |
tagggagacatgaccgagaatcatgaagagataatgtacggtcataattgtatttggtatgaagtgacctgatgtctaagttgagttaaagtcttgattt |
49770623 |
T |
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| Q |
118 |
agaaaacttaatatcatcagttgatcaaggaagctggtaagctttcaattggccatctcacacaatttgttcaaatacatggaaagagtgcaactaacga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49770624 |
agaaaacttaatatcatcagttgatcaaggaagctggtaagctttcaattggccatctcacacaatttgttcaaatacatggaaagagtgcaactaacga |
49770723 |
T |
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| Q |
218 |
ttgccacacaaattaaacatcaatct |
243 |
Q |
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|||||||||||||||||||||||||| |
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| T |
49770724 |
ttgccacacaaattaaacatcaatct |
49770749 |
T |
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