View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19065_high_30 (Length: 237)
Name: NF19065_high_30
Description: NF19065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19065_high_30 |
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Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 31625071 - 31625292
Alignment:
| Q |
1 |
cttattcataagctgttttcaaaagtagcttacacaaaagtgcttatcataataagtgcatttatgcaataaccttcaaattaagctcttcatacaagaa |
100 |
Q |
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| T |
31625071 |
cttattcataagctgttttcaaaagtagcttacacaaaagtgcttatcataataagtgcatttatgcaataaccttcaaattaagctcttcatacaagaa |
31625170 |
T |
|
| Q |
101 |
attgataacagtaataataatcaaacatttgcaattggaaaacaaactattgaaaccctaacatcagaaaacacacaaaaaccctaacctagataatttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |
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| T |
31625171 |
attgataacagtaataataatcaaacatttgcaattggaaaacaaactattgaaaccctaacatcagaaaacacacaaaaaccctaacatagataaattg |
31625270 |
T |
|
| Q |
201 |
aaaaacgattaatgagttaatt |
222 |
Q |
| |
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||||||||||||| |||||||| |
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| T |
31625271 |
aaaaacgattaatcagttaatt |
31625292 |
T |
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