View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19067_high_12 (Length: 300)

Name: NF19067_high_12
Description: NF19067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19067_high_12
NF19067_high_12
[»] chr7 (1 HSPs)
chr7 (1-291)||(41735870-41736160)


Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 41735870 - 41736160
Alignment:
Q  1 tcacatgataacagtttcatctcttcgcccaaaccactacacttacgtcgccgttttaaccgcttgcacccgaatcctcaacctccaatttggtcttcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41735870 tcacatgataacagtttcatctcttcgcccaaaccactacacttacgtcgccgttttaaccgcttgcacccgaatcctcaacctccaatttggtcttcag 41735969  T
Q  101 ttacacgctgctgttatcaaaactggatatttgaaatccgtttttgtatccaatgcgcttatgtcattttattctaaatgtgggttttataaaaatgctt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41735970 ttacacgctgctgttatcaaaactggatatttgaaatccgtttttgtatccaatgcgcttatgttattttattctaaatgtgggttttataaaaatgctt 41736069  T
Q  201 tcaaagtgtttgatgaaatgcctgaaagagatattgcgtcgtggaacactgtaatgtcttgtgcagttcaggagtttatgtatgatgatgt 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41736070 tcaaagtgtttgatgaaatgcctgaaagagatattgcgtcgtggaacactgtaatgtcttgtgcagttcaggagtttatgtatgatgatgt 41736160  T

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