View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19067_low_2 (Length: 552)

Name: NF19067_low_2
Description: NF19067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19067_low_2
NF19067_low_2
[»] chr6 (30 HSPs)
chr6 (11-537)||(11306168-11306694)
chr6 (227-439)||(23590402-23590611)
chr6 (227-326)||(11988816-11988915)
chr6 (80-195)||(17272024-17272139)
chr6 (227-332)||(12418672-12418777)
chr6 (227-332)||(12420869-12420974)
chr6 (75-200)||(19558835-19558960)
chr6 (80-224)||(6931194-6931338)
chr6 (250-511)||(23010127-23010387)
chr6 (81-212)||(14850780-14850911)
chr6 (92-224)||(14462604-14462736)
chr6 (227-319)||(25946231-25946322)
chr6 (227-301)||(31136956-31137030)
chr6 (250-307)||(23778179-23778237)
chr6 (250-319)||(7390770-7390838)
chr6 (16-73)||(30127420-30127477)
chr6 (13-73)||(33549124-33549184)
chr6 (12-74)||(12188298-12188360)
chr6 (11-56)||(17328258-17328303)
chr6 (17-73)||(10338174-10338230)
chr6 (11-74)||(1056679-1056742)
chr6 (11-70)||(14278105-14278164)
chr6 (480-519)||(25915582-25915621)
chr6 (12-74)||(13330106-13330168)
chr6 (250-319)||(18560153-18560221)
chr6 (482-519)||(20229117-20229154)
chr6 (482-519)||(22123101-22123138)
chr6 (11-52)||(24256816-24256857)
chr6 (479-512)||(31137200-31137233)
chr6 (13-73)||(6385882-6385942)
[»] chr3 (40 HSPs)
chr3 (232-519)||(16925656-16925943)
chr3 (227-511)||(8875452-8875734)
chr3 (80-212)||(7871019-7871151)
chr3 (80-195)||(44123764-44123879)
chr3 (81-212)||(2170546-2170677)
chr3 (81-212)||(9726558-9726689)
chr3 (81-212)||(23342509-23342640)
chr3 (81-212)||(13982508-13982639)
chr3 (81-211)||(13988965-13989095)
chr3 (231-314)||(14305158-14305242)
chr3 (81-201)||(13924575-13924695)
chr3 (96-212)||(20452809-20452925)
chr3 (227-301)||(13410236-13410310)
chr3 (250-332)||(13911008-13911089)
chr3 (11-55)||(28703398-28703442)
chr3 (11-55)||(39253735-39253779)
chr3 (80-167)||(21881523-21881610)
chr3 (12-74)||(32651433-32651495)
chr3 (11-68)||(10445133-10445190)
chr3 (11-59)||(8796087-8796135)
chr3 (14-74)||(30311325-30311385)
chr3 (11-74)||(4222160-4222223)
chr3 (480-519)||(13908884-13908923)
chr3 (11-74)||(16354886-16354949)
chr3 (11-74)||(27093355-27093418)
chr3 (11-74)||(46518647-46518710)
chr3 (11-74)||(53412964-53413027)
chr3 (480-518)||(16226566-16226604)
chr3 (12-74)||(37788460-37788522)
chr3 (15-73)||(47236969-47237027)
chr3 (12-73)||(2667882-2667943)
chr3 (486-519)||(13410023-13410056)
chr3 (13-74)||(14186667-14186727)
chr3 (94-167)||(15754469-15754542)
chr3 (12-73)||(30510194-30510255)
chr3 (13-73)||(10499105-10499165)
chr3 (14-70)||(19154654-19154710)
chr3 (13-73)||(21960571-21960631)
chr3 (13-73)||(32638965-32639025)
chr3 (13-73)||(47810740-47810800)
[»] chr1 (37 HSPs)
chr1 (227-511)||(21290631-21290913)
chr1 (227-519)||(33128591-33128883)
chr1 (227-519)||(4601104-4601394)
chr1 (80-202)||(40276129-40276251)
chr1 (80-224)||(29543454-29543598)
chr1 (81-221)||(26707874-26708014)
chr1 (80-188)||(27421516-27421623)
chr1 (81-212)||(15714755-15714886)
chr1 (90-195)||(26026833-26026938)
chr1 (250-323)||(20886946-20887019)
chr1 (81-192)||(33494824-33494935)
chr1 (80-224)||(22578055-22578199)
chr1 (227-334)||(25402098-25402204)
chr1 (397-519)||(18780762-18780883)
chr1 (80-139)||(3618707-3618766)
chr1 (11-74)||(10526842-10526905)
chr1 (250-319)||(22531243-22531311)
chr1 (87-127)||(27315599-27315639)
chr1 (11-74)||(6650614-6650677)
chr1 (11-74)||(8177176-8177239)
chr1 (11-74)||(9165189-9165252)
chr1 (11-74)||(33700767-33700830)
chr1 (11-74)||(36371489-36371552)
chr1 (481-519)||(18522843-18522881)
chr1 (15-72)||(27223128-27223185)
chr1 (11-55)||(2799900-2799944)
chr1 (14-70)||(15786317-15786373)
chr1 (11-55)||(40810505-40810549)
chr1 (11-54)||(3265963-3266006)
chr1 (11-74)||(4566567-4566630)
chr1 (80-167)||(18536943-18537030)
chr1 (12-74)||(6122813-6122875)
chr1 (11-56)||(1247150-1247195)
chr1 (15-72)||(4824992-4825049)
chr1 (94-167)||(37360922-37360995)
chr1 (479-511)||(10158696-10158728)
chr1 (250-302)||(18522616-18522668)
[»] chr8 (38 HSPs)
chr8 (247-519)||(24477449-24477720)
chr8 (227-415)||(22735004-22735193)
chr8 (227-519)||(22264185-22264478)
chr8 (417-519)||(22738260-22738362)
chr8 (80-224)||(8508286-8508430)
chr8 (227-301)||(920792-920866)
chr8 (227-309)||(9007325-9007406)
chr8 (92-212)||(10737696-10737817)
chr8 (227-301)||(23818563-23818637)
chr8 (13-74)||(3624599-3624660)
chr8 (253-302)||(22602489-22602538)
chr8 (229-293)||(17931340-17931404)
chr8 (250-309)||(15926874-15926932)
chr8 (13-73)||(968382-968442)
chr8 (227-323)||(17983741-17983836)
chr8 (11-74)||(6536539-6536602)
chr8 (15-74)||(16852359-16852418)
chr8 (11-74)||(18540317-18540380)
chr8 (15-74)||(19703485-19703544)
chr8 (250-317)||(21284759-21284825)
chr8 (11-74)||(35690058-35690121)
chr8 (250-332)||(12148956-12149037)
chr8 (94-167)||(30716189-30716262)
chr8 (13-73)||(22193360-22193420)
chr8 (15-74)||(2203511-2203570)
chr8 (14-73)||(3058046-3058105)
chr8 (11-46)||(3174799-3174834)
chr8 (11-74)||(8794339-8794402)
chr8 (480-519)||(9007119-9007158)
chr8 (12-74)||(11819795-11819857)
chr8 (468-518)||(21302200-21302250)
chr8 (15-73)||(28783080-28783138)
chr8 (11-69)||(33017238-33017296)
chr8 (12-73)||(27750750-27750811)
chr8 (94-167)||(30723912-30723985)
chr8 (11-52)||(31843830-31843871)
chr8 (90-162)||(29541480-29541552)
chr8 (17-73)||(29858049-29858105)
[»] chr2 (43 HSPs)
chr2 (227-509)||(11323916-11324186)
chr2 (228-519)||(25568175-25568463)
chr2 (81-221)||(1523868-1524008)
chr2 (81-212)||(634415-634546)
chr2 (93-224)||(7386699-7386829)
chr2 (81-212)||(7911858-7911989)
chr2 (81-212)||(14896916-14897047)
chr2 (92-195)||(19087578-19087681)
chr2 (81-212)||(22428479-22428610)
chr2 (90-161)||(25228964-25229035)
chr2 (227-309)||(19279660-19279742)
chr2 (99-212)||(26697265-26697378)
chr2 (81-221)||(22434078-22434218)
chr2 (81-212)||(14888850-14888981)
chr2 (81-224)||(16445247-16445389)
chr2 (81-212)||(43775128-43775259)
chr2 (227-315)||(27597416-27597503)
chr2 (227-301)||(20477925-20477999)
chr2 (92-224)||(21291469-21291594)
chr2 (250-320)||(27189695-27189764)
chr2 (250-320)||(27839509-27839578)
chr2 (14-74)||(42327392-42327452)
chr2 (15-74)||(29503290-29503349)
chr2 (11-74)||(40416384-40416447)
chr2 (12-74)||(19322787-19322849)
chr2 (15-73)||(37480095-37480153)
chr2 (94-167)||(19439506-19439579)
chr2 (94-167)||(25447032-25447105)
chr2 (13-69)||(4262298-4262354)
chr2 (11-74)||(42922433-42922497)
chr2 (95-130)||(9923771-9923806)
chr2 (11-74)||(11251106-11251169)
chr2 (15-73)||(22382237-22382293)
chr2 (15-73)||(22914263-22914319)
chr2 (227-302)||(23781070-23781145)
chr2 (470-517)||(27850745-27850792)
chr2 (96-167)||(43289362-43289433)
chr2 (12-54)||(6859307-6859349)
chr2 (15-73)||(23052521-23052579)
chr2 (15-73)||(39715012-39715070)
chr2 (11-72)||(19244130-19244191)
chr2 (13-74)||(42602573-42602634)
chr2 (17-73)||(12086129-12086185)
[»] scaffold0004 (3 HSPs)
scaffold0004 (227-519)||(357479-357769)
scaffold0004 (81-212)||(347568-347699)
scaffold0004 (220-301)||(378687-378768)
[»] scaffold0501 (1 HSPs)
scaffold0501 (227-439)||(8862-9072)
[»] scaffold0020 (1 HSPs)
scaffold0020 (80-224)||(111094-111238)
[»] chr7 (51 HSPs)
chr7 (418-519)||(15125328-15125429)
chr7 (81-220)||(17620917-17621056)
chr7 (81-221)||(44658865-44659005)
chr7 (81-212)||(32146611-32146742)
chr7 (81-212)||(16646556-16646687)
chr7 (250-511)||(17132741-17132989)
chr7 (81-224)||(20119274-20119417)
chr7 (80-224)||(34324480-34324620)
chr7 (227-318)||(15125430-15125522)
chr7 (227-519)||(7404139-7404419)
chr7 (244-319)||(14961557-14961632)
chr7 (244-319)||(15391029-15391104)
chr7 (253-370)||(17140480-17140593)
chr7 (11-74)||(26459404-26459467)
chr7 (227-301)||(18098031-18098105)
chr7 (12-74)||(39631863-39631925)
chr7 (227-384)||(21668726-21668882)
chr7 (80-137)||(26458574-26458631)
chr7 (99-212)||(42164155-42164268)
chr7 (250-301)||(9560113-9560164)
chr7 (11-74)||(33222389-33222452)
chr7 (81-131)||(572622-572672)
chr7 (227-301)||(12331363-12331437)
chr7 (250-332)||(14943390-14943471)
chr7 (250-332)||(15370983-15371064)
chr7 (464-518)||(17880957-17881011)
chr7 (12-74)||(43215203-43215265)
chr7 (474-519)||(14961358-14961403)
chr7 (474-519)||(15390830-15390875)
chr7 (14-74)||(30442507-30442567)
chr7 (80-167)||(342266-342353)
chr7 (15-73)||(22760883-22760941)
chr7 (81-192)||(42207048-42207163)
chr7 (20-73)||(7801200-7801253)
chr7 (13-73)||(14058273-14058333)
chr7 (13-73)||(14368301-14368361)
chr7 (15-74)||(7499922-7499981)
chr7 (11-74)||(7721388-7721451)
chr7 (11-74)||(7744106-7744169)
chr7 (479-518)||(10309899-10309938)
chr7 (470-517)||(11064351-11064398)
chr7 (468-507)||(12088483-12088522)
chr7 (397-511)||(17140349-17140462)
chr7 (12-74)||(23552137-23552199)
chr7 (15-73)||(43590927-43590985)
chr7 (13-74)||(17041008-17041069)
chr7 (479-519)||(9560337-9560377)
chr7 (11-51)||(11700207-11700247)
chr7 (480-512)||(18098279-18098311)
chr7 (15-71)||(20335829-20335885)
chr7 (14-74)||(35119402-35119462)
[»] chr5 (31 HSPs)
chr5 (80-224)||(18085064-18085208)
chr5 (81-221)||(30959406-30959546)
chr5 (81-221)||(1533550-1533690)
chr5 (95-212)||(17936340-17936461)
chr5 (81-212)||(28368877-28369008)
chr5 (81-224)||(31105800-31105943)
chr5 (227-317)||(24923671-24923760)
chr5 (250-319)||(17987865-17987934)
chr5 (80-224)||(26461101-26461245)
chr5 (227-332)||(22806646-22806750)
chr5 (227-334)||(22011452-22011558)
chr5 (397-511)||(16075764-16075875)
chr5 (227-307)||(16075966-16076047)
chr5 (227-319)||(22703238-22703328)
chr5 (12-74)||(26078046-26078108)
chr5 (11-75)||(14285179-14285243)
chr5 (479-518)||(22969328-22969367)
chr5 (11-74)||(25627076-25627139)
chr5 (11-74)||(34984825-34984888)
chr5 (11-73)||(16773827-16773889)
chr5 (469-519)||(24923896-24923946)
chr5 (94-167)||(21173159-21173232)
chr5 (94-167)||(23055347-23055420)
chr5 (94-162)||(16671620-16671688)
chr5 (92-132)||(18786543-18786583)
chr5 (11-55)||(43442234-43442278)
chr5 (480-519)||(22703486-22703525)
chr5 (15-74)||(30883196-30883255)
chr5 (480-518)||(22011270-22011308)
chr5 (94-144)||(35266537-35266587)
chr5 (479-519)||(17987670-17987710)
[»] chr4 (35 HSPs)
chr4 (80-224)||(2926031-2926175)
chr4 (80-224)||(13998061-13998209)
chr4 (80-224)||(12750716-12750861)
chr4 (81-212)||(20194488-20194619)
chr4 (105-224)||(22747146-22747265)
chr4 (80-212)||(19568589-19568721)
chr4 (99-212)||(53980246-53980359)
chr4 (11-74)||(37109345-37109408)
chr4 (250-332)||(14632401-14632482)
chr4 (13-73)||(49576890-49576950)
chr4 (12-74)||(23377975-23378037)
chr4 (227-332)||(10070940-10071044)
chr4 (253-314)||(12809637-12809697)
chr4 (11-71)||(7949448-7949508)
chr4 (11-74)||(38869787-38869850)
chr4 (12-74)||(7292793-7292855)
chr4 (12-74)||(7539609-7539671)
chr4 (80-138)||(47592199-47592257)
chr4 (94-167)||(1892524-1892597)
chr4 (94-167)||(12661159-12661232)
chr4 (470-519)||(12809851-12809900)
chr4 (11-68)||(37274453-37274510)
chr4 (13-73)||(24234665-24234725)
chr4 (11-74)||(1730483-1730546)
chr4 (11-74)||(10047999-10048062)
chr4 (11-74)||(16581712-16581775)
chr4 (11-74)||(19680782-19680845)
chr4 (80-167)||(23192186-23192273)
chr4 (80-167)||(25693145-25693232)
chr4 (11-74)||(31759652-31759715)
chr4 (480-518)||(14632628-14632666)
chr4 (15-73)||(55427198-55427256)
chr4 (11-68)||(2622389-2622446)
chr4 (94-167)||(16330605-16330678)
chr4 (147-224)||(26995353-26995430)
[»] scaffold0056 (2 HSPs)
scaffold0056 (227-519)||(54109-54400)
scaffold0056 (227-302)||(20162-20237)
[»] scaffold0062 (3 HSPs)
scaffold0062 (81-224)||(18027-18170)
scaffold0062 (81-224)||(28195-28338)
scaffold0062 (81-224)||(38360-38503)
[»] scaffold0502 (1 HSPs)
scaffold0502 (231-519)||(11896-12182)
[»] scaffold0054 (1 HSPs)
scaffold0054 (227-335)||(76667-76777)
[»] scaffold0009 (3 HSPs)
scaffold0009 (394-519)||(269759-269883)
scaffold0009 (229-301)||(223051-223123)
scaffold0009 (479-507)||(50585-50613)
[»] scaffold0001 (1 HSPs)
scaffold0001 (227-308)||(61901-61982)
[»] scaffold0328 (1 HSPs)
scaffold0328 (228-307)||(18013-18092)
[»] scaffold0338 (1 HSPs)
scaffold0338 (227-297)||(17638-17708)
[»] scaffold0088 (2 HSPs)
scaffold0088 (250-314)||(40017-40082)
scaffold0088 (479-511)||(40247-40279)
[»] scaffold0180 (1 HSPs)
scaffold0180 (11-74)||(19956-20019)
[»] scaffold0005 (2 HSPs)
scaffold0005 (250-332)||(184810-184891)
scaffold0005 (480-518)||(184626-184664)
[»] scaffold0031 (1 HSPs)
scaffold0031 (234-297)||(38672-38735)
[»] scaffold0169 (1 HSPs)
scaffold0169 (81-135)||(16817-16871)
[»] scaffold0099 (1 HSPs)
scaffold0099 (234-310)||(36807-36884)
[»] scaffold0258 (1 HSPs)
scaffold0258 (13-73)||(15319-15379)
[»] scaffold1587 (1 HSPs)
scaffold1587 (250-297)||(1394-1441)
[»] scaffold1156 (1 HSPs)
scaffold1156 (253-319)||(853-918)
[»] scaffold0299 (1 HSPs)
scaffold0299 (11-73)||(11548-11610)
[»] scaffold0291 (1 HSPs)
scaffold0291 (15-73)||(2468-2526)
[»] scaffold0170 (1 HSPs)
scaffold0170 (470-519)||(1462-1511)
[»] scaffold0014 (1 HSPs)
scaffold0014 (94-167)||(109988-110061)
[»] scaffold0194 (1 HSPs)
scaffold0194 (13-73)||(13042-13102)
[»] scaffold0102 (1 HSPs)
scaffold0102 (91-224)||(10121-10246)
[»] scaffold0070 (1 HSPs)
scaffold0070 (13-73)||(38898-38958)
[»] scaffold0210 (2 HSPs)
scaffold0210 (470-517)||(18434-18481)
scaffold0210 (470-517)||(26326-26373)
[»] scaffold0002 (1 HSPs)
scaffold0002 (11-74)||(94965-95028)
[»] scaffold0059 (2 HSPs)
scaffold0059 (480-510)||(29473-29503)
scaffold0059 (227-301)||(29679-29753)
[»] scaffold0238 (1 HSPs)
scaffold0238 (11-52)||(2705-2746)
[»] scaffold0047 (1 HSPs)
scaffold0047 (13-69)||(14968-15023)


Alignment Details
Target: chr6 (Bit Score: 503; Significance: 0; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 503; E-Value: 0
Query Start/End: Original strand, 11 - 537
Target Start/End: Original strand, 11306168 - 11306694
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccactcattgagataaatcgtgaaagaatattgggaaaata 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  11306168 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatacaactcattgagataaatcgtgaaagaatattggaaaaata 11306267  T
Q  111 tatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatggattcgtttttcaaatatt 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11306268 tatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccattagactgattatcaattgatggattcgtttttcaaatatt 11306367  T
Q  211 agaaggagataatacggttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttctt 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  11306368 agaaggagataatacggttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttgctttgcaggaatcgaagagctttctc 11306467  T
Q  311 atttcaattggagaatctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11306468 atttcaattggagaatctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcgcgtcgaagacaagc 11306567  T
Q  411 aaaagagcgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatg 510  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11306568 aaaagagcgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatg 11306667  T
Q  511 ggcttagtgactctctatctagttatt 537  Q
    |||||||||||||||||||||||||||    
T  11306668 ggcttagtgactctctatctagttatt 11306694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 227 - 439
Target Start/End: Original strand, 23590402 - 23590611
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    |||||||| |||||||||||   |||||||||||||| || ||||||||||||||||| |||||||||||||||||| ||||| |||| ||||| |||||    
T  23590402 gttagcctctaaatttaacac--tcatttaatatggttgatatttgtttgaccttttattttgcaggaatcgaagagttttctcattttaattgaagaat 23590499  T
Q  327 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaac 426  Q
    |||||| || | |||| |||| |||||||| |  || ||||||||||| ||||||||||||||| |||| ||||||||  || |||||| |||||||| |    
T  23590500 ctcgacaaaacattaagcctagggcgcatagtcagaatttcgacgaagcaaggctgaaagagcaatctcgcgtcgaagttaaacaaaag-gcgggaaagc 23590598  T
Q  427 acgatatcaagca 439  Q
    ||||| |||||||    
T  23590599 acgatttcaagca 23590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 227 - 326
Target Start/End: Complemental strand, 11988915 - 11988816
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    |||||||||||| ||  ||||  ||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  11988915 gttagcctgtaatttcgacaggctcatttaatatggtcaacatttgtttgacctttaactttgcaggaatcaaagagctttctcatttcaattggagaat 11988816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 80 - 195
Target Start/End: Complemental strand, 17272139 - 17272024
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||  |||||||||| ||| ||  || |||||    
T  17272139 agataaatcttgaaagaatattggaaaaatatatttgatatgaatctccatctatcattaattatgctgagcaaacttatttacagctcagtaggctgat 17272040  T
Q  180 tatcaattgatggatt 195  Q
    ||||||||||| ||||    
T  17272039 tatcaattgattgatt 17272024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 12418777 - 12418672
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    |||| ||||||||||| ||||  ||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||  ||||| ||||||||     
T  12418777 gttaacctgtaaatttgacaggctcatttaatatggtcaacatttgtttgacctttaactttgcaggaatcgaaaagctttctattttcatttggagaaa 12418678  T
Q  327 ctcgac 332  Q
    ||||||    
T  12418677 ctcgac 12418672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 227 - 332
Target Start/End: Original strand, 12420869 - 12420974
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    |||| ||||||||||| ||||  ||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||  ||||| ||||||||     
T  12420869 gttaacctgtaaatttgacaggctcatttaatatggtcaacatttgtttgacctttaactttgcaggaatcgaaaagctttctattttcatttggagaaa 12420968  T
Q  327 ctcgac 332  Q
    ||||||    
T  12420969 ctcgac 12420974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 75 - 200
Target Start/End: Complemental strand, 19558960 - 19558835
Alignment:
Q  75 cattgagataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataaga 174  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||| |||||| |||| |  |||  ||     
T  19558960 cattaagataaatcatgaaagaatattgggaaaatatatttgatatgaatctccatctatcattaattgtattgagccaacttgtttacaatccagtagg 19558861  T
Q  175 ctgattatcaattgatggattcgttt 200  Q
     |||||||||||| ||||||| ||||    
T  19558860 ttgattatcaattaatggattagttt 19558835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 6931194 - 6931338
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||||||||| ||| || |||| |  |||| ||||||||||| || | |  ||||||||    
T  6931194 agataaatcttgaaagaatattggaaaaacatatttgatatgaatctccatctattataaattatattgagccaacttatttacagactagtagactgat 6931293  T
Q  180 tatcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    ||||||||||||||||  |||| | ||||||||  ||||||||||    
T  6931294 tatcaattgatggattaattttcccaatattagggggagataata 6931338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 250 - 511
Target Start/End: Original strand, 23010127 - 23010387
Alignment:
Q  250 tcatttaatatggtcgacatttgttt-gaccttttactttgcaggaatcgaagagctttcttatttcaattgga-gaatct-cgacgaagctttaaacct 346  Q
    |||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||   | ||||| |||| ||| || ||||||||| | || |||    
T  23010127 tcatttaatatggtcgacatatgtttagaccattaactttgcaggaatcgaagagcttttcgaattcaaatggaagaagcttcgacgaagcatcaagcct 23010226  T
Q  347 aaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgaggc 446  Q
    ||||||||| ||| | ||| |||| | ||||||| |  |||||| |  | ||| ||||||||||||||  |||||||  |||||| ||||||| |||  |    
T  23010227 aaggcgcatgatttgtgtt-cgacaatgtaaggccgggagagcagttacgcgttgaagacaagcaaaatggcgggaag-cacgat-tcaagcagtgaaac 23010323  T
Q  447 agtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgg 511  Q
    |||||||||| ||| || |||||||| ||||| ||||||||| |||||||||||| |||||||||    
T  23010324 agtttccttt-agtggagaatgtggggcaaatggttgtccaaaatggaggaagtgctgatcatgg 23010387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 212
Target Start/End: Original strand, 14850780 - 14850911
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  14850780 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 14850879  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  14850880 atcaattgatggtttggttttcccaatattag 14850911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 92 - 224
Target Start/End: Complemental strand, 14462736 - 14462604
Alignment:
Q  92 aaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatg 191  Q
    ||||||||||  ||||| ||||||||||||||||||||| ||||||||| | |  |||| ||||||||||| |||| |  || ||||||||||||||||     
T  14462736 aaagaatattaagaaaaaatatttgatatgaatctccatctatcattaactttattgagccaacttatttacagcctagtaggctgattatcaattgata 14462637  T
Q  192 gattcgtttttcaaatattagaaggagataata 224  Q
    |||| ||||||| ||||| ||  ||||||||||    
T  14462636 gattagtttttccaatatcagggggagataata 14462604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 25946322 - 25946231
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 319  Q
    |||||||||||| ||  ||||  ||||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||||| ||| |||||    
T  25946322 gttagcctgtaatttcgacaggctcatttaatatggtcaacatttgtttgacctttaactttgcaggaatcaaag-gctttctcattacaatt 25946231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 31136956 - 31137030
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 301  Q
    |||||||| |||||| |||||  |||||||||||| || |||||||||||||||||||||||||| |||| ||||    
T  31136956 gttagcctttaaattcaacaggctcatttaatatgatcaacatttgtttgaccttttactttgcaagaattgaag 31137030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 23778237 - 23778179
Alignment:
Q  250 tcatttaatatggtcgacatttgttt-gaccttttactttgcaggaatcgaagagcttt 307  Q
    |||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||    
T  23778237 tcatttaatatggtcgacatatgtttagaccattaactttgcaggaatcgaagagcttt 23778179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 7390770 - 7390838
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 319  Q
    ||||||||||||||| || |||||||||||||| ||||||||||||||  ||| |||||| |||||||||    
T  7390770 tcatttaatatggtcaacgtttgtttgacctttaactttgcaggaatcagaga-ctttctcatttcaatt 7390838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 30127477 - 30127420
Alignment:
Q  16 agaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||| ||||| ||||| |||||||| ||| |||||||||||||    
T  30127477 agaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccac 30127420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 33549184 - 33549124
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    |||||||||||||||||||||| || || ||||| ||||||||| || |||||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 33549124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 12188298 - 12188360
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||| ||| ||||||| || ||||| ||||||||| || ||||||||||||||    
T  12188298 agagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccact 12188360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 17328258 - 17328303
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccagg 56  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||    
T  17328258 cagagagaatcgaacctgaaaccttgaagaggagcatactctcagg 17328303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 10338174 - 10338230
Alignment:
Q  17 gaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||||| || ||||| ||||| ||| || |||||||||||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccac 10338230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 1056679 - 1056742
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||| | | ||||||| |||||||||||||||| | || | ||||||||||||    
T  1056679 cagagagaatcgaacttaaaaccttgaggatgagcatactcccaagtcccaggccaataccact 1056742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 14278105 - 14278164
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatac 70  Q
    ||||||||||| ||||||||||||| | || ||||  ||||||||| |||||||||||||    
T  14278105 cagagagaatcaaacctgagaccttaaggaggagcgcactcccaggtccaaagccaatac 14278164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 519
Target Start/End: Complemental strand, 25915621 - 25915582
Alignment:
Q  480 gttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  25915621 gttgtccaagatggagaaagtgttgatcatgggattagtg 25915582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 13330168 - 13330106
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||| |||||||||||| || |||| |||||||| |  ||||| ||||||||||    
T  13330168 agagagaatcgaatctgagaccttgaggaggagcttactcccaagttcaaagtcaataccact 13330106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 18560153 - 18560221
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 319  Q
    ||||||||||||||| ||||||||||||  ||| | ||||||||||| ||||| |||||| |||| ||||    
T  18560153 tcatttaatatggtcaacatttgtttgaattttaattttgcaggaattgaaga-ctttctcattttaatt 18560221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 519
Target Start/End: Complemental strand, 20229154 - 20229117
Alignment:
Q  482 tgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  20229154 tgtccaagattgaggaagtgttgatcatgagcttagtg 20229117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 519
Target Start/End: Complemental strand, 22123138 - 22123101
Alignment:
Q  482 tgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  22123138 tgtccaagattgaggaagtgttgatcatgagcttagtg 22123101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 24256816 - 24256857
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcc 52  Q
    ||||||||||||||| |||||||||||  |||||||||||||    
T  24256816 cagagagaatcgaacttgagaccttgagaatgagcatactcc 24256857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 512
Target Start/End: Original strand, 31137200 - 31137233
Alignment:
Q  479 agttgtccaagatggaggaagtgttgatcatggg 512  Q
    |||||||| |||||||||||||||||||||||||    
T  31137200 agttgtcctagatggaggaagtgttgatcatggg 31137233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 6385942 - 6385882
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||||||| | || ||||| | ||||||| || ||| |||||||||    
T  6385942 gagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaataccac 6385882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 173; Significance: 9e-93; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 232 - 519
Target Start/End: Complemental strand, 16925943 - 16925656
Alignment:
Q  232 cctgtaaatttaacagaatcatttaatatggtcgacatttgtttgacctttta-ctttgcaggaatcgaagagctttcttatttcaattggagaatctcg 330  Q
    ||||||||||| ||||  || ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| |||||||||| ||||| |||    
T  16925943 cctgtaaatttcacaggctcgtttaatatggtcgacatttttttgacctttttgctttgcaggaatcgaagagctttctcatttcaattgaagaatttcg 16925844  T
Q  331 acgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaacacga 430  Q
    | |||||||||| |||||||||||||||  |||||||||||||||||||||||||||||| | ||   ||||||||||||||||| |||||||| |||||    
T  16925843 atgaagctttaagcctaaggcgcataatcagagtttcgacgaagtaaggctgaaagagcaatttcgtatcgaagacaagcaaaag-gcgggaaagcacga 16925745  T
Q  431 tatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    | |||||||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  16925744 tttcaagcaatgaggcggtttccttttagtggaaaacgtgggacaagtagttgtccaagatggaggaagtgctgatcatgggcttagtg 16925656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 227 - 511
Target Start/End: Original strand, 8875452 - 8875734
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    |||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||     
T  8875452 gttagcctgtaaatttgacaggctcatttaatatggtcaacatttgtttgacctttaattttgcaggaatcgaagaactttcttatttcaattggagaaa 8875551  T
Q  327 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaac 426  Q
    ||||||| |   | || |||   |||||||    ||  |||||| ||| |||| |||||||||| |    |||||||| ||| |||||| |||||||| |    
T  8875552 ctcgacggaatatcaagcctggagcgcatagccagatcttcgacaaagcaaggttgaaagagcaattatgcgtcgaagtcaatcaaaag-gcgggaaagc 8875650  T
Q  427 acgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgg 511  Q
    ||||| ||||||| |||  | |||||| | |||| | | | |||||||| | ||||||||||||||||||||||| |||||||||    
T  8875651 acgatttcaagcattgaaacggtttccatgtagt-ggagacgtgggacagacagttgtccaagatggaggaagtgctgatcatgg 8875734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 80 - 212
Target Start/End: Complemental strand, 7871151 - 7871019
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| || |||| ||||||||||| || |||  || |||||    
T  7871151 agataaatcttgaaagaatattgggaaaatatattggatatgaatctccatctatcattaattatgttgagccaacttatttatagtccaataggctgat 7871052  T
Q  180 tatcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||||||| ||||| | ||||||||    
T  7871051 tatcaattgatggattagttttcccaatattag 7871019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 80 - 195
Target Start/End: Complemental strand, 44123879 - 44123764
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| || |||  || |||||    
T  44123879 agataaatattgaaagaatattggaaaaatatatttgatatgaatctccatctatcattaattgtgctgattcaacttatttacagtccagtaggctgat 44123780  T
Q  180 tatcaattgatggatt 195  Q
    ||||||||||||||||    
T  44123779 tatcaattgatggatt 44123764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 2170677 - 2170546
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  2170677 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 2170578  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  2170577 atcaattgatggtttggttttcccaatattag 2170546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 9726689 - 9726558
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  9726689 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatctatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 9726590  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  9726589 atcaattgatggtttggttttcccaatattag 9726558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 212
Target Start/End: Original strand, 23342509 - 23342640
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  23342509 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 23342608  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  23342609 atcaattgatggtttggttttcccaatattag 23342640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 13982639 - 13982508
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| | |||||||||||| |||||||||||||||| ||||| ||| |||||||||||||  |||| |||||| |||| |||| |  || ||||||    
T  13982639 gataaatcttaaaagaatattggaaaaatatatttgatataaatcttcatctatcattaattgtattgagccaacttgtttacagcctagtaggctgatt 13982540  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  13982539 atcaattgatggtttggttttcccaatattag 13982508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 13988965 - 13989095
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| | || |  || ||||||    
T  13988965 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacatcctagtaggctgatt 13989064  T
Q  181 atcaattgatggattcgtttttcaaatatta 211  Q
    |||||||||||| || ||||| | |||||||    
T  13989065 atcaattgatggtttggttttcccaatatta 13989095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 14305158 - 14305242
Alignment:
Q  231 gcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag-agctttcttattt 314  Q
    |||||||||||| ||||  ||||||||||||||||| ||||||||||||||| |||||| ||||||||||| ||||| |||||||    
T  14305158 gcctgtaaatttgacaggctcatttaatatggtcgatatttgtttgacctttaactttgtaggaatcgaagaagcttccttattt 14305242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 81 - 201
Target Start/End: Original strand, 13924575 - 13924695
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    ||||||||  |||||||||||| ||||| ||||||||||||||| | |||  |||||||| |||  ||||  |||||||||| | || |  || ||||||    
T  13924575 gataaatctcgaaagaatattgagaaaaaatatttgatatgaatattcatccatcattaactgtactgagctaacttatttacaacctagtaggctgatt 13924674  T
Q  181 atcaattgatggattcgtttt 201  Q
    ||||||||||||||| |||||    
T  13924675 atcaattgatggattagtttt 13924695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 20452809 - 20452925
Alignment:
Q  96 aatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatggatt 195  Q
    ||||||| ||||||||||||||||||||| ||||| ||| |  ||||||  ||||||||||| |||| | ||||  || ||||||||||||||||  |||    
T  20452809 aatattgagaaaatatatttgatatgaatatccatctattacaaattgtattgagtcaacttgtttacaacccagcaggctgattatcaattgattaatt 20452908  T
Q  196 cgtttttcaaatattag 212  Q
     ||||| || |||||||    
T  20452909 ggttttccagatattag 20452925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 13410310 - 13410236
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 301  Q
    |||||||||||| ||| ||||  ||||||||||||||| ||| ||||  ||||||| ||||||||||||||||||    
T  13410310 gttagcctgtaattttgacaggctcatttaatatggtcaacacttgtccgacctttaactttgcaggaatcgaag 13410236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 250 - 332
Target Start/End: Complemental strand, 13911089 - 13911008
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgac 332  Q
    ||||||||||| ||| ||||||| ||||||||| ||||||||||||| |||| ||||||| ||||||||| ||| || |||||    
T  13911089 tcatttaatatagtcaacatttggttgacctttaactttgcaggaattgaag-gctttctcatttcaatttgaggatttcgac 13911008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 28703398 - 28703442
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccag 55  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||    
T  28703398 cagagagaatcgaacctgagaccttgaagaggagcacactcccag 28703442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 39253779 - 39253735
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccag 55  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||    
T  39253779 cagagagaatcgaacctgagaccttgaagaggagcacactcccag 39253735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 80 - 167
Target Start/End: Original strand, 21881523 - 21881610
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    ||||| ||| |||||||||||||||||||| |||||||||| ||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  21881523 agatagatcttgaaagaatattgggaaaatctatttgatataaatcttcatctattataaattgtattgagccaacttgtttacagcc 21881610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 32651433 - 32651495
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||| |||||| ||||| || ||||| ||||||||| || ||||||||||||||    
T  32651433 agagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaataccact 32651495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 10445133 - 10445190
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaat 68  Q
    |||||||||||||||||||||||| || || ||||| ||||||||| || ||||||||    
T  10445133 cagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 10445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 8796087 - 8796135
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggccc 59  Q
    ||||||||||||||| ||||||||||| || ||||||||||||| ||||    
T  8796087 cagagagaatcgaacttgagaccttgaggaggagcatactcccaagccc 8796135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 30311385 - 30311325
Alignment:
Q  14 agagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||||||||||||| || ||||| ||||||||  || ||||| ||||||||    
T  30311385 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccact 30311325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 4222223 - 4222160
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||| |||| |||| || ||||| ||||||||  || ||||||||||||||    
T  4222223 cagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccact 4222160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 519
Target Start/End: Complemental strand, 13908923 - 13908884
Alignment:
Q  480 gttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  13908923 gttgtccaagatggagaaagtgttgatcatgggattagtg 13908884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 16354886 - 16354949
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||| ||| || ||||| |||| ||||  | ||||||||||||||    
T  16354886 cagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccact 16354949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 27093355 - 27093418
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||| ||||||||||||||| || ||||| ||||||| |  | ||||||||||||||    
T  27093355 cagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccact 27093418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 46518710 - 46518647
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||| ||||||| ||||||| || ||||| ||||||||  || ||||||||||||||    
T  46518710 cagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccact 46518647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 53413027 - 53412964
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||| |||||||||||||||| || ||||| |||||||||    ||||||||||||||    
T  53413027 cagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccact 53412964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 518
Target Start/End: Original strand, 16226566 - 16226604
Alignment:
Q  480 gttgtccaagatggaggaagtgttgatcatgggcttagt 518  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  16226566 gttgtccaagatggaggaagtgctgatcatgggattagt 16226604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 37788460 - 37788522
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||||||||||||||| || ||||| ||||| |||  | ||| ||||||||||    
T  37788460 agagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccact 37788522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 47236969 - 47237027
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||| |||||||||||||| ||||| |||||| || || || ||||||||||    
T  47236969 gagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaataccac 47237027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 2667943 - 2667882
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||| ||||||||||||||||| || || ||||| ||||||||  || |||||||||||||    
T  2667943 agagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccac 2667882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 519
Target Start/End: Complemental strand, 13410056 - 13410023
Alignment:
Q  486 caagatggaggaagtgttgatcatgggcttagtg 519  Q
    ||||||||||||||||||||||||||| ||||||    
T  13410056 caagatggaggaagtgttgatcatgggattagtg 13410023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 14186727 - 14186667
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||||| || ||||| ||| ||||| || ||| ||||||||||    
T  14186727 gagagaatcgaacctgagaccttgaggaggagcacact-ccaggtcccaagacaataccact 14186667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 15754542 - 15754469
Alignment:
Q  94 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    ||||||||| |||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  15754542 agaatattgcgaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 15754469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 30510194 - 30510255
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||||||| ||  | ||||||||||| ||| || |||||| ||||||    
T  30510194 agagagaatcgaacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccac 30510255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 10499105 - 10499165
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||||||  | || ||||| ||||||||  || |||||||||||||    
T  10499105 gagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccac 10499165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 19154710 - 19154654
Alignment:
Q  14 agagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatac 70  Q
    |||||||||||||||||||||| | || ||||| |||| ||||||  ||||||||||    
T  19154710 agagaatcgaacctgagacctttaggaggagcacactctcaggcctcaagccaatac 19154654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 21960631 - 21960571
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    |||||||||||| ||||||||| || || ||||| |||| |||| || |||||||||||||    
T  21960631 gagagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaataccac 21960571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 32639025 - 32638965
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    |||| ||||||||||||||||| |||||||| || ||||||||   | |||||||||||||    
T  32639025 gagaaaatcgaacctgagacctcgaagatgaacacactcccagtttccaagccaataccac 32638965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 47810740 - 47810800
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||| |||| |||||||||  || ||||| ||||||| | ||||||||||||||||    
T  47810740 gagagaatcaaacccgagaccttgcggaggagcacactcccaagaccaaagccaataccac 47810800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 2e-59; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 227 - 511
Target Start/End: Original strand, 21290631 - 21290913
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    ||||| |||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  21290631 gttagtctgtaaatttaacaggctcatttaatatggttgacatttgtttgaccttttactttgcagaaatcgaagggctttctcatttcaattggagaat 21290730  T
Q  327 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaac 426  Q
    ||||||||| | |||| |||||||  |||| |  || ||||||||||| ||||||||||||| | |||  |||| ||| |||||||||| |||||||| |    
T  21290731 ctcgacgaaacgttaagcctaaggtccatattcagaatttcgacgaagcaaggctgaaagagtaatcttgcgtcaaagtcaagcaaaag-gcgggaaagc 21290829  T
Q  427 acgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgg 511  Q
    ||||| ||||||| |||  | |||||| | |||| | ||| |||| |||   ||||||||| |||||||||||||||||||||||    
T  21290830 acgatttcaagcattgaaacggtttccatgtagt-ggaaacgtggcacaggcagttgtccatgatggaggaagtgttgatcatgg 21290913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 227 - 519
Target Start/End: Original strand, 33128591 - 33128883
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    ||||||||| |||||| ||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| | |   ||||| ||||     
T  33128591 gttagcctgcaaatttgacaggctcatttaatatggtcgacatttgtttgacctttaactttgcaggaatcgaagaactttcgtgtacaaattgaagaag 33128690  T
Q  327 c-tcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaa 425  Q
    | ||||||||||  ||| ||| | |||||||| |||||||||||| |||||||| |||| ||||| | || ||||||||||||||||||| ||||| ||     
T  33128691 cttcgacgaagcactaagcctgaagcgcataactggagtttcgacaaagtaaggttgaacgagcaatttcgcgtcgaagacaagcaaaagggcggg-aag 33128789  T
Q  426 cacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||||| |||||||| ||  | ||||| |||||||  |||| ||||||||| |  | ||||||||||||||||||| |||||||| ||||||||    
T  33128790 cacgatttcaagcaaagaaacggtttcattttagtgtaaaacgtgggacaagtgatagtccaagatggaggaagtgctgatcatgtgcttagtg 33128883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 227 - 519
Target Start/End: Complemental strand, 4601394 - 4601104
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    |||||||||||||||| ||||  ||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||  || | ||||| ||||     
T  4601394 gttagcctgtaaatttgacaggctcatttaatatggtcaacatttgtttgacctctaactttgcaggaatcgaagagctttcgcatataaattgaagaac 4601295  T
Q  327 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaac 426  Q
     ||||| |||| | || ||||| ||| ||  | ||| | ||||| ||| ||||||||||| ||  | || | |||||||||| ||| || ||||||||||    
T  4601294 ttcgacaaagcatcaagcctaaagcgtatggtcggaatctcgacaaagcaaggctgaaagggc-gtttcgcatcgaagacaaccaagag-gcgggaaaac 4601197  T
Q  427 acgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    ||||| |  |||||| ||| |||||||||||||| ||||| ||||||||| ||||  | |||||||||||||||| |||||||||||||||||    
T  4601196 acgattttgagcaataagggagtttccttttagtggaaaacgtgggacaagtagtgtttcaagatggaggaagtgctgatcatgggcttagtg 4601104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 80 - 202
Target Start/End: Complemental strand, 40276251 - 40276129
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||| |||||||||||||||| ||||||||||| |||||||||||| |||||||||||||| | || || |||||||| ||||||  || |||||    
T  40276251 agataaatcttgaaagaatattgggacaatatatttgaaatgaatctccatctatcattaattgtgctaagccatcttatttacagcccagtaggctgat 40276152  T
Q  180 tatcaattgatggattcgttttt 202  Q
    |||||||||||||||| ||||||    
T  40276151 tatcaattgatggattagttttt 40276129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 29543454 - 29543598
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||  |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| | || ||| ||||||| | || |  || |||||    
T  29543454 agataaatattgaaagaatattgggaaaatatattttatatgaatctccatctatcattaattgtgctaagccaatttatttacatcctagtaggctgat 29543553  T
Q  180 tatcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    |||||||||||||||| ||||| | |||||| |  ||||||||||    
T  29543554 tatcaattgatggattagttttcccaatatttgggggagataata 29543598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 26708014 - 26707874
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||||||||||||  |||| |||||| ||||  ||| |  || || |||    
T  26708014 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatctatcattaattgtattgagccaacttgtttactgcctagtaggctaatt 26707915  T
Q  181 atcaattgatggattcgtttttcaaatattagaaggagata 221  Q
    |||||||||||| || ||||||| ||||||||  |||||||    
T  26707914 atcaattgatggtttggtttttccaatattagggggagata 26707874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 27421623 - 27421516
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||| || |||  ||| ||||    
T  27421623 agataaattttgaaagaatattggaaaaatatatttgatatgaatctccatctatcattaattgtgttgagttaacttatttatag-ccagtagagtgat 27421525  T
Q  180 tatcaattg 188  Q
    |||||||||    
T  27421524 tatcaattg 27421516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 212
Target Start/End: Original strand, 15714755 - 15714886
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  15714755 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 15714854  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  15714855 atcaattgatggtttggttttcccaatattag 15714886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 90 - 195
Target Start/End: Original strand, 26026833 - 26026938
Alignment:
Q  90 tgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattga 189  Q
    |||||||||||| | |||||||||||||||||||||||||| |||||||||||||  |||| ||||||||||| || |||  ||  ||||||||||||||    
T  26026833 tgaaagaatattagaaaaatatatttgatatgaatctccatctatcattaattgtattgagccaacttatttatagtccagtaggttgattatcaattga 26026932  T
Q  190 tggatt 195  Q
    ||||||    
T  26026933 tggatt 26026938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 20887019 - 20886946
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggag 323  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||    
T  20887019 tcatttaatatggtcaacatttgtttgacttttaactttgcaggaatctaagagctttctcatttcaattggag 20886946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 33494935 - 33494824
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||  |||| || ||| |||| |||| |  ||  |||||    
T  33494935 gataaatcttgaaagaatattggaaaaatatatttgatataaatctccatctatcattaattgtattgagccagcttgtttatagcctagtaggatgatt 33494836  T
Q  181 atcaattgatgg 192  Q
    ||||||||||||    
T  33494835 atcaattgatgg 33494824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 80 - 224
Target Start/End: Complemental strand, 22578199 - 22578055
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||  |||||||||| || ||| |||||||||||| |||||||| | |||||||||||||  |||| |||||| |||| | ||||  ||  ||||    
T  22578199 agataaattttgaaagaataatgagaagatatatttgatacgaatctccctctatcattaattgtactgagccaacttgtttacaacccagtaggatgat 22578100  T
Q  180 tatcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    |||||||| ||||||| ||||| | ||||||||  ||||||||||    
T  22578099 tatcaattaatggattagttttcccaatattagggggagataata 22578055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 227 - 334
Target Start/End: Complemental strand, 25402204 - 25402098
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    ||||||||||||||| |||||  ||||||||||||| | ||||||||||||||||| ||||| | |||||||||| ||||||| ||||||| | ||| ||    
T  25402204 gttagcctgtaaattcaacaggctcatttaatatgggcaacatttgtttgacctttaactttaccggaatcgaag-gctttctcatttcaaattgagtat 25402106  T
Q  327 ctcgacga 334  Q
     |||||||    
T  25402105 ttcgacga 25402098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 519
Target Start/End: Complemental strand, 18780883 - 18780762
Alignment:
Q  397 cgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggagg 496  Q
    ||||||||||||||||||| |||||||  |||||| |||||||| || || ||||||||||||| ||||| || ||| || |  | ||| ||||||||||    
T  18780883 cgtcgaagacaagcaaaagggcgggaag-cacgatttcaagcaaagaagcggtttccttttagtggaaaacgtaggataagtgatggtctaagatggagg 18780785  T
Q  497 aagtgttgatcatgggcttagtg 519  Q
    ||||| | |||||||||||||||    
T  18780784 aagtgctaatcatgggcttagtg 18780762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 3618766 - 3618707
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcatta 139  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  3618766 agataaatcctgaaagaatattgagaaaatatatttgatatgaatcttcatctatcatta 3618707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 10526905 - 10526842
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||| |||||||||||| || ||||| ||||||||| || ||||||||||||||    
T  10526905 cagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccact 10526842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 22531243 - 22531311
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 319  Q
    ||||||||||||||| ||||||| |||||||||  ||||||||||| ||||| ||||||| |||||||||    
T  22531243 tcatttaatatggtcaacatttggttgacctttatctttgcaggaaccgaag-gctttctcatttcaatt 22531311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 27315599 - 27315639
Alignment:
Q  87 tcgtgaaagaatattgggaaaatatatttgatatgaatctc 127  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  27315599 tcgtaaaagaatattgggaaaatatatttgatatgaatctc 27315639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 6650677 - 6650614
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||||||||||| |||| || |||||||||||| |  || ||||||||||||||    
T  6650677 cagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccact 6650614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 8177176 - 8177239
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||| ||||||| || ||||| ||||||||  || ||||||||||||||    
T  8177176 cagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccact 8177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 9165189 - 9165252
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||| ||||||||||| |||| || ||||| ||||||||| || ||||||||||||||    
T  9165189 cagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccact 9165252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 33700767 - 33700830
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||   | ||||||||||||||    
T  33700767 cagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccact 33700830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 36371552 - 36371489
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||| ||||||||| || ||||| |||||||||  | ||||||||||||||    
T  36371552 cagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccact 36371489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 519
Target Start/End: Original strand, 18522843 - 18522881
Alignment:
Q  481 ttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  18522843 ttgtccaagatggaggaagtgttgatcatgggattagtg 18522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 27223128 - 27223185
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatacca 72  Q
    |||||||||||||||||||||||||| ||||| ||||||||  || ||| ||||||||    
T  27223128 gagaatcgaacctgagaccttgaagaagagcacactcccagatcctaagtcaatacca 27223185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 2799944 - 2799900
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccag 55  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||    
T  2799944 cagagagaatcgaacctgagaccttgaggaggagcacactcccag 2799900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 15786317 - 15786373
Alignment:
Q  14 agagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatac 70  Q
    |||||||||||||||||||||||| || ||||| ||||||||  || ||||||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 15786373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 40810549 - 40810505
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccag 55  Q
    |||||||||||||||||||||||||||||| || || ||||||||    
T  40810549 cagagagaatcgaacctgagaccttgaagaggaacacactcccag 40810505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 3266006 - 3265963
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactccca 54  Q
    ||||||||||||||||||||||||||| || ||||| |||||||    
T  3266006 cagagagaatcgaacctgagaccttgaggaggagcacactccca 3265963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 4566630 - 4566567
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||| ||| || ||||| |||||||||  | ||||||||| ||||    
T  4566630 cagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcact 4566567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 18537030 - 18536943
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    ||||| ||| |||||||||||||| ||||| |||||||||| ||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  18537030 agatagatcttgaaagaatattggaaaaatctatttgatataaatcttcatctattataaattgtattgagccaacttgtttacagcc 18536943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 6122875 - 6122813
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||| ||||||||||||||||||||| || ||||| ||||||| | || ||||| ||||||||    
T  6122875 agagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccact 6122813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 1247195 - 1247150
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccagg 56  Q
    ||||||||||||||||||||||||||| || ||| | |||||||||    
T  1247195 cagagagaatcgaacctgagaccttgaggaggagtacactcccagg 1247150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 4825049 - 4824992
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatacca 72  Q
    ||||||| |||||||||||||||||| ||||| ||||| ||| || ||||||| ||||    
T  4825049 gagaatcaaacctgagaccttgaagaggagcacactccaaggtcccaagccaacacca 4824992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 37360995 - 37360922
Alignment:
Q  94 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    ||||||||| |||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  37360995 agaatattgagaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 37360922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 511
Target Start/End: Original strand, 10158696 - 10158728
Alignment:
Q  479 agttgtccaagatggaggaagtgttgatcatgg 511  Q
    ||||||||||||||||||||||| |||||||||    
T  10158696 agttgtccaagatggaggaagtgctgatcatgg 10158728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 18522616 - 18522668
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaaga 302  Q
    ||||||||||||||| | ||||||||||| ||| |||||| || |||||||||    
T  18522616 tcatttaatatggtcaatatttgtttgacttttcactttgtagaaatcgaaga 18522668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 247 - 519
Target Start/End: Original strand, 24477449 - 24477720
Alignment:
Q  247 gaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatct-cgacgaagctttaaacc 345  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||  |||   | ||  |||| || |||| |||| | || ||    
T  24477449 gaatcatttaatatggtcaatatttgtttgacctttaactttgcaggaatcgaagagcttttgtatacaacttaaagaagcttcgacaaagcatcaagcc 24477548  T
Q  346 taaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgagg 445  Q
    |||||||||||||||| ||| |||| | ||||||||||||||| | | || ||||||||||||| ||||| |||||||  |||||| |||||||| || |    
T  24477549 taaggcgcataattggcgtt-cgacaatgtaaggctgaaagagaagtttcgcgtcgaagacaagaaaaagggcgggaag-cacgatttcaagcaaagaag 24477646  T
Q  446 cagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    | |||||| |||||| ||||| ||||||||| |  ||||||||||||||||||||| |||||||||||||||||    
T  24477647 cggtttccatttagtggaaaacgtgggacaagtgattgtccaagatggaggaagtgatgatcatgggcttagtg 24477720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 227 - 415
Target Start/End: Original strand, 22735004 - 22735193
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgacctttt-actttgcaggaatcgaagagctttcttatttcaattggagaa 325  Q
    ||||| |||||||||| |||| ||||||||||||| ||||||| |||  |||||||| | |||||||||||||| ||||||| | |||||||||||||||    
T  22735004 gttagtctgtaaatttgacaggatcatttaatatgatcgacatgtgtccgacctttttaatttgcaggaatcgatgagctttttcatttcaattggagaa 22735103  T
Q  326 tctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaag 415  Q
    ||||||||||||  ||| ||||||||||||| || ||||||||||||||||||||| |||||||| | |  |||||||||||||||||||    
T  22735104 tctcgacgaagcaataaccctaaggcgcatagttagagtttcgacgaagtaaggctaaaagagcatttttgcgtcgaagacaagcaaaag 22735193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 227 - 519
Target Start/End: Complemental strand, 22264478 - 22264185
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    |||||||||||||||| |||   ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| |||   | ||  ||||     
T  22264478 gttagcctgtaaatttcacatgctcatttaatatggtcaacatttgtttgacctttaactttgcaggaatcgaagagatttcatatacaagttaaagaag 22264379  T
Q  327 ct-cgacgaagctttaaacctaaggcgc--ataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaa 423  Q
    || |||| |||| | || ||||||||||  |||||||| ||| |||| | || ||| |||||| | | | || ||||||||||||||||||| |||||||    
T  22264378 cttcgacaaagcatcaagcctaaggcgcgcataattggcgtt-cgacaatgtgaggttgaaagggaagtttcgcgtcgaagacaagcaaaagggcgggaa 22264280  T
Q  424 aacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
      |||||| |||||||| || || ||||||||||||| ||||| ||||||||| |  | ||  ||||||||||||||| |||||||||||||||||    
T  22264279 g-cacgatttcaagcaaagaagcggtttccttttagtggaaaacgtgggacaagtgatggtataagatggaggaagtgctgatcatgggcttagtg 22264185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 417 - 519
Target Start/End: Original strand, 22738260 - 22738362
Alignment:
Q  417 gcgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggctta 516  Q
    |||||||| |||||| |||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  22738260 gcgggaaagcacgatttcaagcaatgaggcggtttccttttagtggaaaatgtgggacaagtagttgtccaagatagaggaagtgctgatcatgggctta 22738359  T
Q  517 gtg 519  Q
    |||    
T  22738360 gtg 22738362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 8508286 - 8508430
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    |||||| || |||||||||||||||||||||||||||||||||| |||||| |||||||||||||  |||  |||||| |||| ||||||  ||  ||||    
T  8508286 agataagtcttgaaagaatattgggaaaatatatttgatatgaacctccatctatcattaattgtactgaaccaacttgtttacagcccagtaggttgat 8508385  T
Q  180 tatcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    |||||||||||||||| ||||| | ||||||||  ||||||||||    
T  8508386 tatcaattgatggattagttttcctaatattagggggagataata 8508430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 920792 - 920866
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 301  Q
    |||||||| |||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  920792 gttagcctataaattcaacaggctcatttaatatggtcaacatttgtttgaccttttactttgcaggaatcgaag 920866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 227 - 309
Target Start/End: Complemental strand, 9007406 - 9007325
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttct 309  Q
    |||||||| ||||||  ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||    
T  9007406 gttagcctataaattcgacagactcatttaatatggtcaacatttgtttgacctttaactttgcaggaatcgaa-agctttct 9007325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 10737696 - 10737817
Alignment:
Q  92 aaagaatattgggaaaata-tatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgat 190  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||||| |||  |||| ||||||||||| | || |  || ||||||||||||||||    
T  10737696 aaagaatattgggaaaaaaatatttgatatgaatctccatctatcattaactgtattgagccaacttatttacaacctagtaggctgattatcaattgat 10737795  T
Q  191 ggattcgtttttcaaatattag 212  Q
    || || ||||| | ||||||||    
T  10737796 gggttagttttcccaatattag 10737817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 23818637 - 23818563
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 301  Q
    |||||| |||||||  |||||  ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  23818637 gttagcatgtaaatccaacaggctcatttaatatggtcaacatttgtttgaccttttactttgtaggaatcgaag 23818563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 3624660 - 3624599
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| || ||||||||||||||    
T  3624660 gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccact 3624599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 22602538 - 22602489
Alignment:
Q  253 tttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaaga 302  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  22602538 tttaatatggtcaacatttgtttgactttttactttgcaggaatcgaaga 22602489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 17931404 - 17931340
Alignment:
Q  229 tagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcagg 293  Q
    |||||||||| ||| ||||  ||||||||||||||||||||||| ||||||||| ||||||||||    
T  17931404 tagcctgtaattttgacaggctcatttaatatggtcgacatttggttgacctttaactttgcagg 17931340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 15926874 - 15926932
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttct 309  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||    
T  15926874 tcatttaatatggtcaacatttgtttgacctttaactttgcaggaat-gaagaggtttct 15926932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 968442 - 968382
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    |||||||||||||||||||||| || || ||||| ||||||||| || |||||||||||||    
T  968442 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 968382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 17983836 - 17983741
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggag 323  Q
    |||||||||||| ||| ||||  |||||||||| |||| ||| ||| ||||||||| |||||| | ||||||||| ||||||| ||||||| |||||    
T  17983836 gttagcctgtaattttgacaggctcatttaataaggtcaacacttggttgacctttaactttgaaagaatcgaag-gctttctcatttcaactggag 17983741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 6536602 - 6536539
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||| |||||||||||||||| || ||||| ||||| ||| || ||||||||||||||    
T  6536602 cagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccact 6536539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 16852418 - 16852359
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||||||||| || || ||||| ||||||||| || ||||||||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccact 16852359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 18540380 - 18540317
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||||||| ||  || | ||||||||| || ||||||||||||||    
T  18540380 cagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccact 18540317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 19703485 - 19703544
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||| || ||||| |||| |||| || ||||||||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccact 19703544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 21284759 - 21284825
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaa 317  Q
    ||||||||||||||| ||||||||||||||  |  ||||||||||||||||| ||||||| |||||||    
T  21284759 tcatttaatatggtcaacatttgtttgaccactatctttgcaggaatcgaag-gctttctcatttcaa 21284825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 35690058 - 35690121
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||||||| || ||||| || |||||  || ||||||||||||||    
T  35690058 cagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccact 35690121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 332
Target Start/End: Original strand, 12148956 - 12149037
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgac 332  Q
    ||||||||||||||| ||||||| |||||| || |||||| ||||||| ||| ||||||| ||||||||| ||| || |||||    
T  12148956 tcatttaatatggtcaacatttggttgaccgttaactttgtaggaatcaaag-gctttctcatttcaattcgaggatttcgac 12149037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 30716262 - 30716189
Alignment:
Q  94 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  30716262 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 30716189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 22193360 - 22193420
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||| ||||||||| || ||||| |||||||||||| ||| ||| |||||    
T  22193360 gagagaatcgaacctaagaccttgaggaggagcacactcccaggccccaagtcaacaccac 22193420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 2203570 - 2203511
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||| || ||||||||||||| || ||||| ||||||||| || ||||||||||||||    
T  2203570 gagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 2203511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 3058046 - 3058105
Alignment:
Q  14 agagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||||||| ||| ||||| ||||||| | || || ||||||||||    
T  3058046 agagaatcgaacctgagaccttgcagaggagcacactcccaagacccaaaccaataccac 3058105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 3174799 - 3174834
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagca 46  Q
    ||||||||||||||||||||||||||| ||||||||    
T  3174799 cagagagaatcgaacctgagaccttgaggatgagca 3174834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 8794339 - 8794402
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||| ||| || ||||| ||| |||||  | ||||||||||||||    
T  8794339 cagagagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagccaataccact 8794402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 519
Target Start/End: Complemental strand, 9007158 - 9007119
Alignment:
Q  480 gttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  9007158 gttgtccaagatggaggaagtgctgatcatgggattagtg 9007119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 11819857 - 11819795
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||| ||||||||||||||||||||| || ||||| ||||||| | || ||||| ||||||||    
T  11819857 agagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccact 11819795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 21302250 - 21302200
Alignment:
Q  468 gtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagt 518  Q
    |||||||||| | |||||| |||||||||||||| |||||||||| |||||    
T  21302250 gtgggacaaacaattgtccgagatggaggaagtgctgatcatgggattagt 21302200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 28783138 - 28783080
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||| ||||||||||| || ||||| ||||||||| |  |||||||||||||    
T  28783138 gagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccac 28783080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 33017296 - 33017238
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaata 69  Q
    ||||||||||||||||||||||||||| || ||||| ||| |||||  | |||||||||    
T  33017296 cagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaata 33017238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 27750811 - 27750750
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    |||| ||||||||||||||||||||| || ||||| ||||||| | || ||||| |||||||    
T  27750811 agagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccac 27750750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 30723985 - 30723912
Alignment:
Q  94 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    |||||||||| ||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  30723985 agaatattggaaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 30723912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 31843871 - 31843830
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcc 52  Q
    |||||| ||||||||||||||| |||||||| ||||||||||    
T  31843871 cagagaaaatcgaacctgagactttgaagataagcatactcc 31843830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 29541480 - 29541552
Alignment:
Q  90 tgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttattta 162  Q
    ||||||||||||||| |||| ||||||||| |||||| ||| ||| || ||||||  |||| |||||| ||||    
T  29541480 tgaaagaatattggggaaatctatttgataggaatcttcatctattataaattgtattgagccaacttgttta 29541552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 29858049 - 29858105
Alignment:
Q  17 gaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    |||||||||||||||||| || || ||||| |||||| || || |||||||||||||    
T  29858049 gaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccac 29858105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 509
Target Start/End: Complemental strand, 11324186 - 11323916
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggag-aa 325  Q
    |||||| |||||||||||| |  ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| | ||||| || ||    
T  11324186 gttagcttgtaaatttaactggctcatttaatatggtcgacatttgtttgacctataactttgcaggaatcgaagagctttcgtatataaattgaagaaa 11324087  T
Q  326 tctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaa 425  Q
    | ||||| |||| | || ||||||||||   |||||||||||||| ||| |||         ||| | || ||||||||||||||||||| ||||| ||     
T  11324086 tttcgacaaagcatcaagcctaaggcgc---attggagtttcgacaaagcaag---------gcagtttcgcgtcgaagacaagcaaaagggcggg-aag 11324000  T
Q  426 cacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcat 509  Q
    |||||| |||||||| || || ||||||||||||| ||||| ||||| ||| | ||||||||||||||| ||||||||||||||    
T  11323999 cacgatttcaagcaaggaagcggtttccttttagtggaaaacgtggggcaagtggttgtccaagatggaagaagtgttgatcat 11323916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 228 - 519
Target Start/End: Original strand, 25568175 - 25568463
Alignment:
Q  228 ttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatc 327  Q
    |||||||||||||| |||||| ||||||||||||||| | ||||||||||||||| |||||||||||||| |||||||||||  |||||||  |||| ||    
T  25568175 ttagcctgtaaattcaacagactcatttaatatggtcaatatttgtttgacctttaactttgcaggaatcaaagagctttctcttttcaatccgagagtc 25568274  T
Q  328 tcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaa--aagagcgggaaaa 425  Q
    |||||||  | | || ||||  ||||||| |   ||||||||| ||| ||||||||||||||| || ||  ||||   |||||||  ||| ||||||||     
T  25568275 tcgacgagacatcaagcctagagcgcatagtcaaagtttcgacaaagcaaggctgaaagagcattcgca--tcgagttcaagcaatcaag-gcgggaaag 25568371  T
Q  426 cacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||||| | ||||| | || | |||||| |||||| | ||||||||| |||   |||||||||||||||| ||||| |||||||||| ||||||    
T  25568372 cacgattttaagcattaagacggtttcc-tttagt-ggaaatgtggggcaagcggttgtccaagatggagaaagtgctgatcatggggttagtg 25568463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 1523868 - 1524008
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||  |||| |||||| |||| || | |  || ||||||    
T  1523868 gataaatcttgaaagaatattggaaaaatatatttgatataaatctccatatatcattaattgtattgagccaacttgtttacagtctagtaggctgatt 1523967  T
Q  181 atcaattgatggattcgtttttcaaatattagaaggagata 221  Q
    |||||||||||| || ||||| | ||||||||  |||||||    
T  1523968 atcaattgatggtttggttttcccaatattagggggagata 1524008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 212
Target Start/End: Original strand, 634415 - 634546
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  634415 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 634514  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  634515 atcaattgatggtttggttttcccaatattag 634546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 93 - 224
Target Start/End: Complemental strand, 7386829 - 7386699
Alignment:
Q  93 aagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatgg 192  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||||||||||  |||| ||||||||||| |||| |  || ||||||||||||||||||    
T  7386829 aagaatattgagaaaa-atatttgatatgaatctccatctatcattaattgtattgagccaacttatttacagcctagtagtctgattatcaattgatgg 7386731  T
Q  193 attcgtttttcaaatattagaaggagataata 224  Q
    ||   |||||| ||||||||  ||||||||||    
T  7386730 atcaatttttccaatattagggggagataata 7386699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 7911989 - 7911858
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  7911989 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 7911890  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  7911889 atcaattgatggtttggttttcccaatattag 7911858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 212
Target Start/End: Original strand, 14896916 - 14897047
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  14896916 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 14897015  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  14897016 atcaattgatggtttggttttcccaatattag 14897047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 92 - 195
Target Start/End: Original strand, 19087578 - 19087681
Alignment:
Q  92 aaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatg 191  Q
    ||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||| ||||||||||| ||||||  ||  |||| |||||||||||    
T  19087578 aaagaatattgagaaaatatatttgatatgaatctcaatctattattaattgtgatgagccaacttatttatagcccagtaggttgatcatcaattgatg 19087677  T
Q  192 gatt 195  Q
    ||||    
T  19087678 gatt 19087681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 212
Target Start/End: Original strand, 22428479 - 22428610
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  22428479 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 22428578  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  22428579 atcaattgatggtttggttttcccaatattag 22428610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 25228964 - 25229035
Alignment:
Q  90 tgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttattt 161  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  25228964 tgaaagaatattgggaaaatatatttgatatgaatctccatctatcattaattgtgttgagccaacttattt 25229035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 309
Target Start/End: Complemental strand, 19279742 - 19279660
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttct 309  Q
    |||||||||||||||| ||||  |||||||| |||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  19279742 gttagcctgtaaatttgacaggctcatttaacatggtcaacatttttttgacctttaactttgcaggaatcgaagagctttct 19279660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 26697265 - 26697378
Alignment:
Q  99 attgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatggattcgt 198  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||  |||| |||||| |||| |||| |  || |||||||||||||||||| || ||    
T  26697265 attgggaaaatatatttgatataaatctccatctatcattaattgtattgagccaacttgtttacagcctagtaggctgattatcaattgatggtttggt 26697364  T
Q  199 ttttcaaatattag 212  Q
    ||| | ||||||||    
T  26697365 tttcccaatattag 26697378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 22434078 - 22434218
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||| | |||| |||| |  ||  |||||    
T  22434078 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatctatctttaattgtattgagccaacatgtttacagcctactaggttgatt 22434177  T
Q  181 atcaattgatggattcgtttttcaaatattagaaggagata 221  Q
    |||||||||||| || ||||| | ||||||||  |||||||    
T  22434178 atcaattgatggtttggttttcccaatattagggggagata 22434218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 81 - 212
Target Start/End: Original strand, 14888850 - 14888981
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||| ||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||  |  || ||||||    
T  14888850 gataaatcttgaaagaatattggaaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcatagtaggctgatt 14888949  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  14888950 atcaattgatggtttggttttcccaatattag 14888981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 81 - 224
Target Start/End: Complemental strand, 16445389 - 16445247
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    ||||||||  ||||||||||||  |||| ||||||||||||||||||||| |||| |||| |||  |||| ||||||||||| |||| |  || |||| |    
T  16445389 gataaatctcgaaagaatattgaaaaaaaatatttgatatgaatctccatctatccttaactgtattgagccaacttatttacagcctagtaggctga-t 16445291  T
Q  181 atcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    ||||||||||||||| ||||| | ||||||||  ||||||||||    
T  16445290 atcaattgatggattagttttcccaatattagggggagataata 16445247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 81 - 212
Target Start/End: Original strand, 43775128 - 43775259
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||| ||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| | || |  || ||||||    
T  43775128 gataaatcttgaaagaatattggaaaaatgtatttgatataaatctccatctatctttaattgtattgagccaacttgtttacaccctagtaggctgatt 43775227  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  43775228 atcaattgatggtttggttttcccaatattag 43775259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 315
Target Start/End: Original strand, 27597416 - 27597503
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttc 315  Q
    ||||||||| || ||| ||||  || |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  27597416 gttagcctgaaattttgacaggctcgtttaatatggtcaacatttgtttgaccttttactttgcaggaatcgaaga-ctttctcatttc 27597503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 20477925 - 20477999
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 301  Q
    |||||| |||||||| ||||   |||||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  20477925 gttagcatgtaaattcaacatgctcatttaatatggtcatcatttgtttaaccttttactttgcaggaatcgaag 20477999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 92 - 224
Target Start/End: Complemental strand, 21291594 - 21291469
Alignment:
Q  92 aaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatg 191  Q
    ||||||||||||||||| ||||||||||||||||||||| |       |||||  |||| ||||||||||| |||| |  || ||||||||||| |||||    
T  21291594 aaagaatattgggaaaaaatatttgatatgaatctccatct-------attgtattgagccaacttatttacagcctagtaggctgattatcaactgatg 21291502  T
Q  192 gattcgtttttcaaatattagaaggagataata 224  Q
    |||| ||||| | ||||||||  ||||||||||    
T  21291501 gattagttttcccaatattagggggagataata 21291469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 320
Target Start/End: Original strand, 27189695 - 27189764
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattg 320  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||  ||||| ||||||||||    
T  27189695 tcatttaatatggtcaacatttgtttgacctttaactttgtaggaatcgaaga-ttttctcatttcaattg 27189764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 320
Target Start/End: Original strand, 27839509 - 27839578
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattg 320  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||  ||||| ||||||||||    
T  27839509 tcatttaatatggtcaacatttgtttgacctttaactttgtaggaatcgaaga-ttttctcatttcaattg 27839578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 42327392 - 42327452
Alignment:
Q  14 agagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||||||||||||| || ||||| ||||||||| || ||||||||||||||    
T  42327392 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 42327452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 29503349 - 29503290
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||| || ||||| ||||||||| || || |||||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccact 29503290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 40416384 - 40416447
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||||| | || |||||||||||||||  | ||| ||||||||||    
T  40416384 cagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccact 40416447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 19322849 - 19322787
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||| |||| ||||||||||||| ||||| ||||||||| || || |||||||||||    
T  19322849 agagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccact 19322787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 37480153 - 37480095
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||||||| || ||||| |||| |||| || |||||||||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccac 37480095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 19439579 - 19439506
Alignment:
Q  94 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  19439579 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 19439506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 25447105 - 25447032
Alignment:
Q  94 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  25447105 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 25447032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 4262298 - 4262354
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaata 69  Q
    ||||||||||||||||||||||||| || ||||| ||| ||||| || |||||||||    
T  4262298 gagagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 42922497 - 42922433
Alignment:
Q  11 cagagagaatcgaacctgagacc-ttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||| |||| || ||||| |||||||||  | ||||||||||||||    
T  42922497 cagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccact 42922433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 130
Target Start/End: Original strand, 9923771 - 9923806
Alignment:
Q  95 gaatattgggaaaatatatttgatatgaatctccat 130  Q
    ||||||||| ||||||||||||||||||||||||||    
T  9923771 gaatattggaaaaatatatttgatatgaatctccat 9923806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 11251169 - 11251106
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||| ||||||||||||||| || ||||| ||| ||| | || ||||||||||||||    
T  11251169 cagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccact 11251106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 22382237 - 22382293
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||| ||||||||||| |||||||  ||||||||| |||||| |||||||||    
T  22382237 gagaatcgaacttgagaccttgaggatgagc--actcccaggtccaaagtcaataccac 22382293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 22914263 - 22914319
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||| ||||||||||| |||||||  ||||||||| |||||| |||||||||    
T  22914263 gagaatcgaacttgagaccttgaggatgagc--actcccaggtccaaagtcaataccac 22914319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 23781145 - 23781070
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaaga 302  Q
    ||||| |||||| || |||||  ||||||||| ||||| ||||||  ||||| ||| |||||||||||||||||||    
T  23781145 gttagactgtaatttcaacaggctcatttaatgtggtcaacatttagttgacttttaactttgcaggaatcgaaga 23781070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 517
Target Start/End: Original strand, 27850745 - 27850792
Alignment:
Q  470 gggacaaatagttgtccaagatggaggaagtgttgatcatgggcttag 517  Q
    |||||||  |||||||||||||| ||||||||||||||||||| ||||    
T  27850745 gggacaagcagttgtccaagatgaaggaagtgttgatcatgggattag 27850792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 43289433 - 43289362
Alignment:
Q  96 aatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    |||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  43289433 aatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 43289362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 6859307 - 6859349
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactccca 54  Q
    ||||||||||||||||||||| ||||||| ||||| |||||||    
T  6859307 agagagaatcgaacctgagactttgaagaggagcacactccca 6859349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 23052521 - 23052579
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||||||| ||  |||| ||||||| | || |||||||||||||    
T  23052521 gagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccac 23052579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 39715070 - 39715012
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    |||||||||||||||||||| || || ||||| ||||||||| || ||| |||||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccac 39715012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 19244191 - 19244130
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatacca 72  Q
    ||||||||||||||||||||||||||  || ||||| |||| |||| || ||| ||||||||    
T  19244191 cagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaatacca 19244130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 42602634 - 42602573
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||| ||||| |||||||||  | ||||| ||||||||| || ||||||||||||||    
T  42602634 gagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccact 42602573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 12086129 - 12086185
Alignment:
Q  17 gaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    |||||||||| |||||||||| || ||||| ||| ||||| || |||||||||||||    
T  12086129 gaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaataccac 12086185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 93; Significance: 5e-45; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 227 - 519
Target Start/End: Original strand, 357479 - 357769
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    |||||| ||||||||| ||||  ||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||| |||      
T  357479 gttagcgtgtaaatttgacaggctcatttaatatggacaacatttgtttgacctttaactttgcaggaatcgaagagctttcgtatataaattgaagagc 357578  T
Q  327 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaac 426  Q
     ||||| |||  | || ||||  | | ||  |  || | ||||| ||| ||||||||||||    | || ||||||||||||||||||| || ||||| |    
T  357579 ttcgacaaaggatcaagcctagagtgtattgtcagaatctcgacaaagcaaggctgaaagaatgtt-tcgcgtcgaagacaagcaaaag-gcaggaaagc 357676  T
Q  427 acgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    ||||| |||||||| ||| ||||||||||| ||| ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  357677 acgatttcaagcaaggagacagtttcctttgagtggaaaacgtgggacaagtagttgtctaagatggaggaagtgttgatcatgggcttagtg 357769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 347699 - 347568
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  347699 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 347600  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  347599 atcaattgatggtttggttttcccaatattag 347568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 301
Target Start/End: Complemental strand, 378768 - 378687
Alignment:
Q  220 taatacggttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 301  Q
    |||||| |||||| ||||| ||  ||||  ||||||||| ||||| ||||||  ||||| ||| ||||||||||||||||||    
T  378768 taatactgttagcttgtaatttcgacaggctcatttaatgtggtcaacatttagttgacttttaactttgcaggaatcgaag 378687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 227 - 439
Target Start/End: Complemental strand, 9072 - 8862
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    |||||||||||||||||||||  ||||||||||| |||| ||||||||||||||||||||||| || |||||||||||||||  ||||||||| ||||||    
T  9072 gttagcctgtaaatttaacaggctcatttaatatagtcgccatttgtttgaccttttactttgtagaaatcgaagagctttcacatttcaattagagaat 8973  T
Q  327 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaac 426  Q
    ||||| ||| | |||| ||||| |||||||||  || ||||||||||| ||||||||||||| | |||| | || ||| ||| |||||| || ||||| |    
T  8972 ctcgatgaaacattaagcctaa-gcgcataatcagaatttcgacgaagcaaggctgaaagagtaatctcgcatctaagtcaatcaaaag-gcaggaaagc 8875  T
Q  427 acgatatcaagca 439  Q
    ||||| |||||||    
T  8874 acgatttcaagca 8862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 111094 - 111238
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||| |||||||||||| |||||||  ||||||||||||||||||| |||||||||||||| |||| ||||||||||| |||| |  ||||||||    
T  111094 agataaatcttgaaagaatattaggaaaatcgatttgatatgaatctccatctatcattaattgtgctgagccaacttatttacagcctagtagactgat 111193  T
Q  180 tatcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    ||| |||||||||||| ||||||| ||||||||  ||||||||||    
T  111194 tatgaattgatggattagtttttccaatattagggggagataata 111238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 4e-36; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 418 - 519
Target Start/End: Complemental strand, 15125429 - 15125328
Alignment:
Q  418 cgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttag 517  Q
    ||||||| ||| || |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15125429 cgggaaagcacaatttcaagcaatgaggctgtttccttttagtagaaaacgtgggacaagtagttgtccaagatggaggaagtgttgatcatgggcttag 15125330  T
Q  518 tg 519  Q
    ||    
T  15125329 tg 15125328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 17620917 - 17621056
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  |||||||||    
T  17620917 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtagactgatt 17621016  T
Q  181 atcaattgatggattcgtttttcaaatattagaaggagat 220  Q
    |||||||||||| || ||||| | ||||||||| ||||||    
T  17621017 atcaattgatggtttggttttcccaatattagagggagat 17621056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 44658865 - 44659005
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||  |||| |||||| |||| |||| |  || ||||||    
T  44658865 gataaatcttgaaagaatattggaaaaatatatttgatataaatctccatctatcattaattgtattgagccaacttgtttacagcctagtaggctgatt 44658964  T
Q  181 atcaattgatggattcgtttttcaaatattagaaggagata 221  Q
    |||||||||||| || ||||| | ||||||||  |||||||    
T  44658965 atcaattgatggtttggttttcccaatattagggggagata 44659005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 81 - 212
Target Start/End: Original strand, 32146611 - 32146742
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  32146611 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatctatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 32146710  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||||| ||||||||    
T  32146711 atcaattgatggtttggtttttccaatattag 32146742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 212
Target Start/End: Original strand, 16646556 - 16646687
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  16646556 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 16646655  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  16646656 atcaattgatggtttggttttcccaatattag 16646687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 511
Target Start/End: Complemental strand, 17132989 - 17132741
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgacgaagctttaaacctaag 349  Q
    ||||| |||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||| || |||||||| ||||   || ||||||    
T  17132989 tcattaaatatggtcgacttttgtttgacctatcactttgcaggaatcgaagagctttctcatttcaattgaaggatctcgacaaagcaccaagcctaag 17132890  T
Q  350 gcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgaggcagt 449  Q
    ||||   |||||||||||||  ||  |||         ||| |  | ||||||| ||||||||||| | |||  | |||||| |||||||| ||  | ||    
T  17132889 gcgc---attggagtttcgaaaaaacaag---------gcagttgcgcgtcgaacacaagcaaaagggtggg-gagcacgatttcaagcaaggaatcggt 17132803  T
Q  450 ttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgg 511  Q
    ||||||||||| ||||| ||||| ||| | ||||||||||||||| |||||| |||||||||    
T  17132802 ttccttttagtggaaaacgtggggcaagtggttgtccaagatggaagaagtgctgatcatgg 17132741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 20119274 - 20119417
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    ||||||||  |||||||||| ||||||| ||||||||||||||||||||| |||||||| ||||  |||| ||||||||||| |||  |  || ||||||    
T  20119274 gataaatctggaaagaatatcgggaaaaaatatttgatatgaatctccatctatcattatttgtattgagccaacttatttatagcttagtaggctgatt 20119373  T
Q  181 atcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    ||||||||||||||| ||||| | |||||||   ||||||||||    
T  20119374 atcaattgatggattagttttcccaatattaaggggagataata 20119417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 34324480 - 34324620
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||| |||||||||||||     ||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||| |||| |  || |||||    
T  34324480 agataaatcttgaaagaatattgc----atatatttgatataaatctccatctatcattaattgtgttgagccaacttatttacagcctagtaggctgat 34324575  T
Q  180 tatcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    ||||||||||||||||  |||| | ||||||||  ||||||||||    
T  34324576 tatcaattgatggattatttttcccaatattagggggagataata 34324620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 15125522 - 15125430
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgacc-ttttactttgcaggaatcgaagagctttcttatttcaat 318  Q
    |||||| ||||||||| |||   |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  15125522 gttagcatgtaaatttgacaagctcatttaatatggtcgacatttgtttgacctttttactttgcaggaatcaaagagctttctcatttcaat 15125430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 227 - 519
Target Start/End: Original strand, 7404139 - 7404419
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    |||| |||| |||||| ||||  ||||||||| ||||||||||||||||||||| | |||||||||||||||||||| |||| ||||  |||||  |||     
T  7404139 gttatcctgcaaattttacaggttcatttaatttggtcgacatttgtttgacctgtaactttgcaggaatcgaagagatttcgtattcaaattgaggaag 7404238  T
Q  327 ct-cgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaa 425  Q
    || |||| | || | || |||| ||||||| |   |||| ||||| ||| ||         |||| | || | ||||||||||||||||| |||| ||      
T  7404239 cttcgacaaggcatcaagcctagggcgcatta---gagtctcgacaaagcaa---------agcagtttcgcatcgaagacaagcaaaagggcggtaag- 7404325  T
Q  426 cacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||||| |||||||| || |||||||||||||||| ||||| ||||||||| |  | ||| |||||||| ||||||||||| ||||||||||||    
T  7404326 cacgatttcaagcaaagaagcagtttccttttagtggaaaacgtgggacaagtgatggtctaagatggaagaagtgttgattatgggcttagtg 7404419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 244 - 319
Target Start/End: Complemental strand, 14961632 - 14961557
Alignment:
Q  244 acagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 319  Q
    ||||| ||||||||||||||| | |||| |||||||||| ||||||||||||| |||||||||||| |||||||||    
T  14961632 acagactcatttaatatggtcaatatttatttgacctttaactttgcaggaattgaagagctttctcatttcaatt 14961557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 244 - 319
Target Start/End: Complemental strand, 15391104 - 15391029
Alignment:
Q  244 acagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 319  Q
    ||||| ||||||||||||||| | |||| |||||||||| ||||||||||||| |||||||||||| |||||||||    
T  15391104 acagactcatttaatatggtcaatatttatttgacctttaactttgcaggaattgaagagctttctcatttcaatt 15391029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 253 - 370
Target Start/End: Complemental strand, 17140593 - 17140480
Alignment:
Q  253 tttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgacgaagctttaaacctaaggcg 352  Q
    ||||||||||||||| |||||||||||| | |||| |||||||||||||| |||||| | |||||||| || |||||||| ||||   || |||||||||    
T  17140593 tttaatatggtcgacttttgtttgacctatcactt-gcaggaatcgaagaactttctcagttcaattgaaggatctcgacaaagcaccaagcctaaggcg 17140495  T
Q  353 cataattggagtttcgac 370  Q
    |   ||||||||||||||    
T  17140494 c---attggagtttcgac 17140480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 26459404 - 26459467
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||| || ||||||||||||||    
T  26459404 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 26459467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 18098031 - 18098105
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 301  Q
    ||||||||| ||||| |||||  ||||||||||||||| |||||||||||| |||| ||||||||||||| ||||    
T  18098031 gttagcctgcaaattcaacaggctcatttaatatggtcaacatttgtttgaactttaactttgcaggaattgaag 18098105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 39631925 - 39631863
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||||||||||||||| || |||| |||||||||| || ||||||||||||||    
T  39631925 agagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccact 39631863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 21668882 - 21668726
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    ||||| ||||||||| ||||   |||||||||||| || | ||||| |||| ||||||||||||||||||| |||| |||||| ||||| |||  |||||    
T  21668882 gttagtctgtaaattcaacatgctcatttaatatgctcaatatttggttgatcttttactttgcaggaatcaaaga-ctttctcatttctattaaagaat 21668784  T
Q  327 ctcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaa 384  Q
     |||||||    | || ||||| |||||||||  |||||||||| ||| |||||||||    
T  21668783 ttcgacgagaaatcaatcctaaagcgcataatcagagtttcgacaaagcaaggctgaa 21668726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 26458631 - 26458574
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcat 137  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  26458631 agataaatcttgaaagaatattgagaaaatatatttgatatgaatcttcatctatcat 26458574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 212
Target Start/End: Complemental strand, 42164268 - 42164155
Alignment:
Q  99 attgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatggattcgt 198  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||  |||| ||||||  ||| |||||   ||  ||||||||||||||||| || ||    
T  42164268 attggaaaaatatatttgatataaatctccatctatcattaattgtattgagccaacttgcttacagcccggtaggttgattatcaattgatggtttggt 42164169  T
Q  199 ttttcaaatattag 212  Q
    ||| | ||||||||    
T  42164168 tttcccaatattag 42164155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 301
Target Start/End: Original strand, 9560113 - 9560164
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 301  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||    
T  9560113 tcatttaatatggtcgacatttgattgagctttaactttgcaggaatcgaag 9560164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 33222452 - 33222389
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||||||| |||||| | ||| ||||| || ||||||||||||||    
T  33222452 cagagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagccaataccact 33222389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 572672 - 572622
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatt 131  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  572672 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatt 572622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 12331437 - 12331363
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 301  Q
    |||||| |||||||| |||||  | ||||||||||||| || ||| |||||||||| ||||||||||||||||||    
T  12331437 gttagcttgtaaattcaacaggcttatttaatatggtcaacgtttttttgacctttaactttgcaggaatcgaag 12331363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 250 - 332
Target Start/End: Complemental strand, 14943471 - 14943390
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgac 332  Q
    |||||| |||||||| | ||||||||||||||| ||||| |||||||| ||| ||||||| ||||||||||||| || |||||    
T  14943471 tcatttcatatggtcaatatttgtttgacctttaactttacaggaatcaaag-gctttctcatttcaattggaggatttcgac 14943390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 250 - 332
Target Start/End: Complemental strand, 15371064 - 15370983
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgac 332  Q
    |||||| |||||||| | ||||||||||||||| ||||| |||||||| ||| ||||||| ||||||||||||| || |||||    
T  15371064 tcatttcatatggtcaatatttgtttgacctttaactttacaggaatcaaag-gctttctcatttcaattggaggatttcgac 15370983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 464 - 518
Target Start/End: Original strand, 17880957 - 17881011
Alignment:
Q  464 aaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagt 518  Q
    ||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||    
T  17880957 aaatgtgggacaagtagttgtcaaagatggaggaagtgttgatgatgggattagt 17881011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 43215265 - 43215203
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||||||||||||||| || ||||| ||||| ||| || ||||||||||||||    
T  43215265 agagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccact 43215203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 474 - 519
Target Start/End: Complemental strand, 14961403 - 14961358
Alignment:
Q  474 caaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||    
T  14961403 caaacagttgtccaagatggaggaagtgttgatcatggggttagtg 14961358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 474 - 519
Target Start/End: Complemental strand, 15390875 - 15390830
Alignment:
Q  474 caaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||    
T  15390875 caaacagttgtccaagatggaggaagtgttgatcatggggttagtg 15390830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 30442567 - 30442507
Alignment:
Q  14 agagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||| ||||||||| || ||||| ||||||||| || ||||||||||||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccact 30442507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 342353 - 342266
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    ||||| ||| |||||||||||||||||||| |||||||||| ||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  342353 agatagatcttgaaagaatattgggaaaatctatttgatataaatcttcatctattataaattgtattgagccaacttgtttacagcc 342266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 22760941 - 22760883
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||||||| || ||||| ||||||||| || ||| |||||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccac 22760883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 42207048 - 42207163
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctcc----atttatcattaattgtgatgagtcaacttatttaaagcccataagact 176  Q
    |||||||| |||||||  ||||| |||||||||||||||| |||||||    || |||||||||||||  |||| |||||| |||| |||| |  ||  |    
T  42207048 gataaatcttgaaagataattggaaaaatatatttgatataaatctccatctatctatcattaattgtattgagccaacttgtttatagcctagtaggtt 42207147  T
Q  177 gattatcaattgatgg 192  Q
    ||||||||||||||||    
T  42207148 gattatcaattgatgg 42207163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 7801253 - 7801200
Alignment:
Q  20 tcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||||| ||||| ||||||||| || ||| |||||||||    
T  7801253 tcgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccac 7801200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 14058333 - 14058273
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||  | ||| |||||||||    
T  14058333 gagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccac 14058273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 14368361 - 14368301
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||  | ||| |||||||||    
T  14368361 gagagaatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccac 14368301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 7499922 - 7499981
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||||||||| ||||| ||||| |||| |||| || ||||||||| ||||    
T  7499922 gagaatcgaacctgagacctcgaagaggagcaaactctcaggtcccaagccaatatcact 7499981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 7721451 - 7721388
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||| ||||||||||| || ||| | ||||||||| || || |||||||||||    
T  7721451 cagagagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaaccaataccact 7721388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 7744106 - 7744169
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||| ||||||||||||||| || ||||||| ||||||  || ||||| ||||||||    
T  7744106 cagagagaatcaaacctgagaccttgaggaggagcatagtcccagatcctaagcctataccact 7744169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 518
Target Start/End: Original strand, 10309899 - 10309938
Alignment:
Q  479 agttgtccaagatggaggaagtgttgatcatgggcttagt 518  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  10309899 agttgtccaagatggaggaagtgttgatcgtgggattagt 10309938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 517
Target Start/End: Complemental strand, 11064398 - 11064351
Alignment:
Q  470 gggacaaatagttgtccaagatggaggaagtgttgatcatgggcttag 517  Q
    ||||||||  |||||||||||||||||||||| |||||||||| ||||    
T  11064398 gggacaaacggttgtccaagatggaggaagtgctgatcatgggattag 11064351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 507
Target Start/End: Complemental strand, 12088522 - 12088483
Alignment:
Q  468 gtgggacaaatagttgtccaagatggaggaagtgttgatc 507  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  12088522 gtgggacaagcagttgtccaagatggaggaagtgttgatc 12088483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 511
Target Start/End: Complemental strand, 17140462 - 17140349
Alignment:
Q  397 cgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggagg 496  Q
    ||||||||||||||||||| ||||| || || ||| |||||||| || |  ||||||||||||| |||||  |||| ||| | ||| || |||||||| |    
T  17140462 cgtcgaagacaagcaaaagggcggg-aagcatgatttcaagcaaggaagaggtttccttttagtggaaaacatggggcaagtggttatctaagatggaag 17140364  T
Q  497 aagtgttgatcatgg 511  Q
    ||||  |||||||||    
T  17140363 aagtcctgatcatgg 17140349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 23552199 - 23552137
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||| ||||||||||| || ||||| ||||||||| || ||| ||||| ||||    
T  23552199 agagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcact 23552137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 43590985 - 43590927
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    |||||||||||||||||| |||| || ||||| ||||||| | || |||||||||||||    
T  43590985 gagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccac 43590927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 17041008 - 17041069
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||||| || ||||| ||| ||||  || |||||||| |||||    
T  17041008 gagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccact 17041069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 519
Target Start/End: Original strand, 9560337 - 9560377
Alignment:
Q  479 agttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||||||||||||||  ||||||||||||||||| ||||||    
T  9560337 agttgtccaagatgggagaagtgttgatcatgggattagtg 9560377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 11700247 - 11700207
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactc 51  Q
    ||||||||||||||||||||||||||| || ||||| ||||    
T  11700247 cagagagaatcgaacctgagaccttgaggaggagcaaactc 11700207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 480 - 512
Target Start/End: Original strand, 18098279 - 18098311
Alignment:
Q  480 gttgtccaagatggaggaagtgttgatcatggg 512  Q
    |||| ||||||||||||||||||||||||||||    
T  18098279 gttgcccaagatggaggaagtgttgatcatggg 18098311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 20335829 - 20335885
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatacc 71  Q
    |||||||||||||||||||| || || ||||| ||||||| | || |||||||||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacc 20335885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 35119462 - 35119402
Alignment:
Q  14 agagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||||| | ||||| ||||||||||| |||||  || ||| ||||||||||    
T  35119462 agagaatcgaacctgaaatcttgaggatgagcatacacccagatcccaagtcaataccact 35119402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 80 - 224
Target Start/End: Complemental strand, 18085208 - 18085064
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||| |||| |  || |||||    
T  18085208 agataaatcttgaaagaatattgggaaaatatatttgatataaatctccatctatcattaattgtgttaagccaacttatttacagcctagtaggctgat 18085109  T
Q  180 tatcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    ||||||||||||||||  |||| | ||||||||  ||||||||||    
T  18085108 tatcaattgatggattatttttcccaatattagggggagataata 18085064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 30959546 - 30959406
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||  |||| |||||| |||| |||| |  || ||||||    
T  30959546 gataaatcttgaaagaatattggaaaaatatatttgatataaatctccatctatcattaattgtattgagccaacttgtttacagcctagtaggctgatt 30959447  T
Q  181 atcaattgatggattcgtttttcaaatattagaaggagata 221  Q
    |||||||||||| || ||||||| ||||||||  |||||||    
T  30959446 atcaattgatggtttggtttttccaatattagggggagata 30959406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 1533690 - 1533550
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||  |||| |||||| |||| || | |  || ||||||    
T  1533690 gataaatcttgaaagaatattggaaaaatatatttgatataaatctccatctatcattaattgtattgagccaacttgtttacagtctagtaggctgatt 1533591  T
Q  181 atcaattgatggattcgtttttcaaatattagaaggagata 221  Q
    |||||||||||| || ||||| | ||||||||  |||||||    
T  1533590 atcaattgatggtttagttttcccaatattagggggagata 1533550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 17936340 - 17936461
Alignment:
Q  95 gaatattgggaaaatatatttgatat----gaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgat 190  Q
    ||||||||||||||||||||||||||    |||||||||| |||||||||||||| |||| ||||||||||| ||||||  || ||| ||||||||||||    
T  17936340 gaatattgggaaaatatatttgatatatatgaatctccatctatcattaattgtgttgagccaacttatttacagcccagtaggctgtttatcaattgat 17936439  T
Q  191 ggattcgtttttcaaatattag 212  Q
    ||||| ||||| | ||||||||    
T  17936440 ggattagttttcccaatattag 17936461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 28369008 - 28368877
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  28369008 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatatatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 28368909  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||| | ||||||||    
T  28368908 atcaattgatggtttggttttcccaatattag 28368877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 224
Target Start/End: Complemental strand, 31105943 - 31105800
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    ||||||||  |||| ||||||||||||| |||||||||||||||| |||| ||||||||| |||  |||| ||||||||||| | || |  || ||||||    
T  31105943 gataaatctcgaaataatattgggaaaaaatatttgatatgaatccccatatatcattaactgtattgagccaacttatttacaacctagtaggctgatt 31105844  T
Q  181 atcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    ||||||||||||||| ||||| | ||||||||  ||||||||||    
T  31105843 atcaattgatggattagttttcccaatattagggggagataata 31105800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 227 - 317
Target Start/End: Original strand, 24923671 - 24923760
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaa 317  Q
    |||||| |||||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  24923671 gttagcttgtaaattcaacaggctcatttaatatggtcaacatttgtttgaccttttactttgcaggaatcgaa-agctttctcatttcaa 24923760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 17987934 - 17987865
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 319  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| || |||||||||    
T  17987934 tcatttaatatggtcaacatttgtttgacctttaactttgcagaaatcgaagagcttcctcatttcaatt 17987865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 80 - 224
Target Start/End: Complemental strand, 26461245 - 26461101
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||| ||||||||||||  ||||||| ||||||||||||||| ||| |||||| ||||||  |||| |||||| |||| | | ||  ||  ||||    
T  26461245 agataaatcttgaaagaatattaagaaaatacatttgatatgaatcttcatctatcataaattgtattgagccaacttgtttacaacacagtaggttgat 26461146  T
Q  180 tatcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    ||| |||| ||| ||| ||||||| ||||||||| ||||||||||    
T  26461145 tataaattaatgaattagtttttccaatattagatggagataata 26461101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 22806750 - 22806646
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    |||||||||||| ||  ||||| ||||| |||||| || ||| ||||||||||||| ||||||||||||||||| |||||||| ||||||||| ||| ||    
T  22806750 gttagcctgtaatttcgacagactcattaaatatgttcaacacttgtttgacctttaactttgcaggaatcgaa-agctttctcatttcaatttgaggat 22806652  T
Q  327 ctcgac 332  Q
     |||||    
T  22806651 ttcgac 22806646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 227 - 334
Target Start/End: Complemental strand, 22011558 - 22011452
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    ||||| |||||| || |||||| ||||||||| ||||| ||||||| ||||| |||||||||||||||||||||| ||||| | |||| || | ||| ||    
T  22011558 gttagtctgtaatttcaacagattcatttaatgtggtcaacatttggttgactttttactttgcaggaatcgaag-gctttatcattttaacttgaggat 22011460  T
Q  327 ctcgacga 334  Q
    ||||||||    
T  22011459 ctcgacga 22011452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 511
Target Start/End: Complemental strand, 16075875 - 16075764
Alignment:
Q  397 cgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggagg 496  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||  ||||||||||| | | || || ||||   |||| ||||||||| |||||||    
T  16075875 cgtcgaagacaagcaaaagagcgggaag-cacgat-tcaagcaatgaaacagtttcctttaa-tggagaacgtggagaaaatggttgtccaaaatggagg 16075779  T
Q  497 aagtgttgatcatgg 511  Q
    |||||||||||||||    
T  16075778 aagtgttgatcatgg 16075764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 16076047 - 16075966
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgttt-gaccttttactttgcaggaatcgaagagcttt 307  Q
    ||||| ||||||||||  |||  |||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||    
T  16076047 gttagtctgtaaatttctcaggttcatttaatatggtcgacatatgttttgaccattaactttgcaggaatcgaagagcttt 16075966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 319
Target Start/End: Original strand, 22703238 - 22703328
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 319  Q
    |||||||||||| ||  ||||  ||||||||||||||| ||||||||||| ||||| |||||||||||||| |||| |||||| |||||||||    
T  22703238 gttagcctgtaatttcgacagggtcatttaatatggtcaacatttgtttg-cctttaactttgcaggaatcaaaga-ctttctcatttcaatt 22703328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 26078046 - 26078108
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||||||||||||||||||  |||||||||||| | || || |||||||||||    
T  26078046 agagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccact 26078108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 14285243 - 14285179
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccactc 75  Q
    ||||||||||||||||||||||||||| || ||||| |||||||||  | |||||||| ||||||    
T  14285243 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactc 14285179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 518
Target Start/End: Original strand, 22969328 - 22969367
Alignment:
Q  479 agttgtccaagatggaggaagtgttgatcatgggcttagt 518  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  22969328 agttgtccaagatggaggaagtgttgatcatgggattagt 22969367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 25627139 - 25627076
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||||||| || ||||| ||||||| |  | ||||||||||||||    
T  25627139 cagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccact 25627076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 34984888 - 34984825
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||| ||||||||| || ||||| |||||||||  | ||||||||||||||    
T  34984888 cagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccact 34984825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 16773889 - 16773827
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    |||||||||||||||||||||||| || || ||||| ||||||||| || ||| |||||||||    
T  16773889 cagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccac 16773827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 519
Target Start/End: Original strand, 24923896 - 24923946
Alignment:
Q  469 tgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||| |||| ||||| |||||||||||||||||||||||||||| ||||||    
T  24923896 tggggcaaacagttgcccaagatggaggaagtgttgatcatgggattagtg 24923946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 21173232 - 21173159
Alignment:
Q  94 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  21173232 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 21173159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 23055420 - 23055347
Alignment:
Q  94 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  23055420 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 23055347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 16671620 - 16671688
Alignment:
Q  94 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttattta 162  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| ||||    
T  16671620 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgttta 16671688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 18786583 - 18786543
Alignment:
Q  92 aaagaatattgggaaaatatatttgatatgaatctccattt 132  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  18786583 aaagaatattggaaaaatatatttgaaatgaatctccattt 18786543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 43442278 - 43442234
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccag 55  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||    
T  43442278 cagagagaatcgaacctgagaccttgaggaggagcacactcccag 43442234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 519
Target Start/End: Original strand, 22703486 - 22703525
Alignment:
Q  480 gttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  22703486 gttgtccaagatggagaaagtgttgatcatgggattagtg 22703525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 30883196 - 30883255
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||| |||| ||||||||||| || ||||| ||||||||| || ||||||||||||||    
T  30883196 gagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccact 30883255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 518
Target Start/End: Complemental strand, 22011308 - 22011270
Alignment:
Q  480 gttgtccaagatggaggaagtgttgatcatgggcttagt 518  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  22011308 gttgtccaagatggaggaagtgctgatcatgggattagt 22011270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 35266587 - 35266537
Alignment:
Q  94 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgt 144  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||    
T  35266587 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgt 35266537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 519
Target Start/End: Complemental strand, 17987710 - 17987670
Alignment:
Q  479 agttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||||||||| |||||||||||| |||||||||| ||||||    
T  17987710 agttgtccaaaatggaggaagtgctgatcatggggttagtg 17987670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 80 - 224
Target Start/End: Complemental strand, 2926175 - 2926031
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||| ||||||||||||| ||||| ||||||||||| ||||||||| |||||||||||||| |||| ||||||||||| ||||||  || |||||    
T  2926175 agataaatcttgaaagaatattgtgaaaaaatatttgatataaatctccatctatcattaattgtgttgagccaacttatttacagcccagtaggctgat 2926076  T
Q  180 tatcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    ||||||||||||||||  |||||  ||||||||  ||||||||||    
T  2926075 tatcaattgatggattatttttttcaatattagggggagataata 2926031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 13998061 - 13998209
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttg----atatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagac 175  Q
    ||||||||| |||||||||||||| ||||||||||||    |||||||||| ||| |||||||||||||| |||| ||||||||||| ||||||  || |    
T  13998061 agataaatcttgaaagaatattggaaaaatatatttggtatatatgaatcttcatctatcattaattgtgttgagccaacttatttacagcccaataggc 13998160  T
Q  176 tgattatcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    |||||||||||||||||||| ||||||| ||||||||  ||||||||||    
T  13998161 tgattatcaattgatggattagtttttccaatattagggggagataata 13998209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 80 - 224
Target Start/End: Complemental strand, 12750861 - 12750716
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||| ||| ||  |  |||||    
T  12750861 agataaatcttgaaagaatattgggaaaatatatttgatataaatctccatctatcattaattgtgttgagccaacttatttacagctcagtacgctgat 12750762  T
Q  180 tatcaattgatggatt-cgtttttcaaatattagaaggagataata 224  Q
    |||||||||| |||||   |||||| ||||||||  ||||||||||    
T  12750761 tatcaattgaaggattatttttttccaatattagggggagataata 12750716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 20194619 - 20194488
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||  |||| |||||| |||| |||| |  || ||||||    
T  20194619 gataaatcttgaaagaatattgggaaaatgtatttgatataaatctccatctatctttaattgtattgagccaacttgtttacagcctagtaggctgatt 20194520  T
Q  181 atcaattgatggattcgtttttcaaatattag 212  Q
    |||||||||||| || ||||||| ||||||||    
T  20194519 atcaattgatggtttggtttttccaatattag 20194488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 105 - 224
Target Start/End: Original strand, 22747146 - 22747265
Alignment:
Q  105 aaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatggattcgtttttca 204  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||  ||||||  ||  |||||||||||||||||||| ||||| |     
T  22747146 aaaatatatttgatataaatctccatctatcattaattgtgttgagccaacttattttcagcccagtaggttgattatcaattgatggattagttttccc 22747245  T
Q  205 aatattagaaggagataata 224  Q
    ||||||||  ||||||||||    
T  22747246 aatattagggggagataata 22747265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 19568589 - 19568721
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgat 179  Q
    ||||||||| ||||| |||||| | |||||||||||||||||||||||||| | |||||||||||  |||| |||||| |||| | | ||  ||  ||||    
T  19568589 agataaatcttgaaataatattagaaaaatatatttgatatgaatctccatctctcattaattgtattgagccaacttgtttacaactcaataggttgat 19568688  T
Q  180 tatcaattgatggattcgtttttcaaatattag 212  Q
    |||||||| ||||||| ||||| | ||||||||    
T  19568689 tatcaattaatggattagttttcctaatattag 19568721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 53980246 - 53980359
Alignment:
Q  99 attgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgatggattcgt 198  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||  |||| ||||||  ||| ||||||  ||  ||||||||||||||||| || ||    
T  53980246 attggaaaaatatatttgatataaatctccatctatcattaattgtattgagccaacttgcttacagcccagtaggttgattatcaattgatggtttggt 53980345  T
Q  199 ttttcaaatattag 212  Q
    ||| | ||||||||    
T  53980346 tttcccaatattag 53980359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 37109345 - 37109408
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||| || ||||||||||||||    
T  37109345 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 37109408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 332
Target Start/End: Original strand, 14632401 - 14632482
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgac 332  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||||| |||| |||| ||| || |||||    
T  14632401 tcatttaatatggtcaacatttggttgacctttaactttgcaggaatcgaag-gctttctcatttaaatttgaggatttcgac 14632482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 49576890 - 49576950
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||||||||| || ||||| ||||||| | ||||||||||||||||    
T  49576890 gagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccac 49576950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 23378037 - 23377975
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||||||||||||||||||| || ||||| ||||||||| || ||||||||| ||||    
T  23378037 agagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataacact 23377975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 10071044 - 10070940
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    |||||||||||| ||  ||||  ||||||||||||||| ||||||  ||||| ||| |||||||||||||||||| ||||||| |||| |||| ||| ||    
T  10071044 gttagcctgtaatttcgacaggctcatttaatatggtcaacattttgttgacttttaactttgcaggaatcgaag-gctttctcattttaatttgaggat 10070946  T
Q  327 ctcgac 332  Q
     |||||    
T  10070945 ttcgac 10070940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 12809637 - 12809697
Alignment:
Q  253 tttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttattt 314  Q
    |||||||||| | ||||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  12809637 tttaatatggacaacatttgtttgacctttaactttgcaggaatcgaag-gctttctcattt 12809697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 7949448 - 7949508
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaatacc 71  Q
    ||||||||||||||||||||||||||| || ||||| ||||| ||| || |||||||||||    
T  7949448 cagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatacc 7949508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 38869850 - 38869787
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||| ||||||||||||||||||||| || ||||| ||||||||  || ||||||||||||||    
T  38869850 cagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccact 38869787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 7292793 - 7292855
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||| |||| || ||||| |||||||||  | ||||||||||||||    
T  7292793 agagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccact 7292855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 7539671 - 7539609
Alignment:
Q  12 agagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||||||  | ||||||||||||||  |||||  ||||||||||    
T  7539671 agagagaatcgaacctgagaccttgagaaggagcatactcccagatccaaaatcaataccact 7539609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 47592199 - 47592257
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcatt 138  Q
    ||||||||| |||| ||||| ||| |||||||||||||||||||||||||  |||||||    
T  47592199 agataaatcttgaaggaataatggaaaaatatatttgatatgaatctccaactatcatt 47592257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 1892597 - 1892524
Alignment:
Q  94 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  1892597 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 1892524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 12661232 - 12661159
Alignment:
Q  94 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  12661232 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 12661159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 470 - 519
Target Start/End: Original strand, 12809851 - 12809900
Alignment:
Q  470 gggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    ||||||||  |||||||||||||||||||||| |||||||||| ||||||    
T  12809851 gggacaaacggttgtccaagatggaggaagtgctgatcatgggattagtg 12809900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 37274453 - 37274510
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaat 68  Q
    ||||||||||||||||| ||||||||| || ||||| ||||||||| || ||||||||    
T  37274453 cagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaat 37274510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 24234725 - 24234665
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||| ||||||||| | |||||||| ||||||| | || |||||||||||||    
T  24234725 gagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaataccac 24234665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 1730483 - 1730546
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||||||| ||| ||||||| ||||||| ||||| |||| |||| || ||||||||||||||    
T  1730483 cagagagaatagaatctgagactttgaagaggagcacactctcaggtcccaagccaataccact 1730546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 10048062 - 10047999
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||| |||  | ||||||||||  ||| || ||||||||||||||    
T  10048062 cagagagaatcgaacctgagaccatgagaaggagcatactcttaggtcccaagccaataccact 10047999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 16581775 - 16581712
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||| ||| |||||||||||||||| || ||||| |||||||||  | ||||||||||||||    
T  16581775 cagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagccaataccact 16581712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 19680782 - 19680845
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||| ||||||||| || ||||| ||||||| | || |||| |||||||||    
T  19680782 cagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccact 19680845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 167
Target Start/End: Original strand, 23192186 - 23192273
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    ||||| ||| |||||||||||||| ||||| |||||||||| ||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  23192186 agatagatcttgaaagaatattggtaaaatctatttgatataaatcttcatctattataaattgtattgagccaacttgtttacagcc 23192273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 25693232 - 25693145
Alignment:
Q  80 agataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    ||||| ||| |||||||||||||| ||||| |||||||||| ||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  25693232 agatagatcttgaaagaatattggtaaaatctatttgatataaatcttcatctattataaattgtattgagccaacttgtttacagcc 25693145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 31759652 - 31759715
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||| ||||||||| |||||||||||| || ||||| ||||||| | || ||||||||||||||    
T  31759652 cagaaagaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccact 31759715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 518
Target Start/End: Original strand, 14632628 - 14632666
Alignment:
Q  480 gttgtccaagatggaggaagtgttgatcatgggcttagt 518  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  14632628 gttgtccatgatggaggaagtgttgatcatgggattagt 14632666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 55427198 - 55427256
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    |||||||||||||||||||| ||  | ||||| ||||||||| || |||||||||||||    
T  55427198 gagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccac 55427256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 2622389 - 2622446
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaat 68  Q
    |||||||||||||||||||||| | || || ||||| ||||||||| || ||||||||    
T  2622389 cagagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaat 2622446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 16330678 - 16330605
Alignment:
Q  94 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    ||||||||| |||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  16330678 agaatattgagaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 16330605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 26995353 - 26995430
Alignment:
Q  147 tgagtcaacttatttaaagcccataagactgattatcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    |||| ||||||||||| || |||  ||| |||||||||||| ||||||| ||||| | ||||||||  ||||||||||    
T  26995353 tgagccaacttatttacagtccagtagattgattatcaattaatggattagttttcccaatattagggggagataata 26995430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 227 - 519
Target Start/End: Original strand, 54109 - 54400
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaat 326  Q
    |||||||||||||||| ||||  |||||| ||||||||||||||| |||||||||| ||||| ||||||||||||||||||| ||| | | ||  ||||     
T  54109 gttagcctgtaaatttcacaggctcatttgatatggtcgacatttatttgacctttaactttacaggaatcgaagagctttcgtatataagttaaagaag 54208  T
Q  327 c-tcgacgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaa 425  Q
    | ||||  |||| | |  |||||||||||||| ||| | |||||| | |||||||| ||||| || | || ||| ||||||||||||||| | ||| ||     
T  54209 cttcgataaagcatcacgcctaaggcgcataactggcg-ttcgacaatgtaaggctaaaagaacagtttcgcgttgaagacaagcaaaagggtggg-aag 54306  T
Q  426 cacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    |||||| ||||| ||  | ||  |||||||||||| ||||||||||||||| |  | ||| ||||||||| ||| | |||||||||||||||||    
T  54307 cacgatttcaaggaaataagcgttttccttttagtggaaaatgtgggacaagtgatggtctaagatggagaaagggctgatcatgggcttagtg 54400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 20162 - 20237
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaaga 302  Q
    |||||||||||| ||| ||||| || |||||| ||||| ||||||  ||||| ||| ||||||||||||| |||||    
T  20162 gttagcctgtaattttgacagactcttttaatgtggtcaacatttagttgacttttaactttgcaggaattgaaga 20237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 68; Significance: 4e-30; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 18027 - 18170
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||| |||  | |||||||||||||| | || |  || ||||||    
T  18027 gataaatctcgaaagaatattgggaaaaaatatttgatatgaatctccatctatcattaactgtattaagtcaacttatttataacctagtaggctgatt 18126  T
Q  181 atcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    ||||||||||||||| ||||| | ||||||||  ||||||||||    
T  18127 atcaattgatggattagttttcccaatattagggggagataata 18170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 28195 - 28338
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||| |||  | |||||||||||||| | || |  || ||||||    
T  28195 gataaatctcgaaagaatattgggaaaaaatatttgatatgaatctccatctatcattaactgtattaagtcaacttatttataacctagtaggctgatt 28294  T
Q  181 atcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    ||||||||||||||| ||||| | ||||||||  ||||||||||    
T  28295 atcaattgatggattagttttcccaatattagggggagataata 28338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 38360 - 38503
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgatt 180  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||| |||  | |||||||||||||| | || |  || ||||||    
T  38360 gataaatctcgaaagaatattgggaaaaaatatttgatatgaatctccatctatcattaactgtattaagtcaacttatttataacctagtaggctgatt 38459  T
Q  181 atcaattgatggattcgtttttcaaatattagaaggagataata 224  Q
    ||||||||||||||| ||||| | ||||||||  ||||||||||    
T  38460 atcaattgatggattagttttcccaatattagggggagataata 38503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 231 - 519
Target Start/End: Original strand, 11896 - 12182
Alignment:
Q  231 gcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcg 330  Q
    |||||||||||| ||||  ||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||   |  | ||||| ||||  |||    
T  11896 gcctgtaaatttgacaggctcatttaatatggtcaacatttgtttgacctttaaccttgcaggaatcgaagagcttttgcacataaattgaagaacttcg 11995  T
Q  331 acgaagctttaaacctaaggcgcataattggagtttcgacgaagtaaggctgaaagagcactctcacgtcgaagacaagcaaaagagcgggaaaacacga 430  Q
    || |||| | || ||||  ||| ||  |  || | ||||| ||| ||||||||||| |   | || |||| |||| ||| ||||| || ||||| |||||    
T  11996 acaaagcatcaagcctagagcgtatggtcagaatctcgacaaagcaaggctgaaag-ggtgtttcgcgtcaaagataagtaaaag-gcaggaaagcacga 12093  T
Q  431 tatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    | |||||||| ||| |  |||||||||||  |||||  |||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  12094 tttcaagcaaggagacgatttccttttagcggaaaacttgggacaagtagttgtccaagatggagtaagtgctgatcatgggcttagtg 12182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 76667 - 76777
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgacctttt--actttgcaggaatcgaagagctttcttatttcaattggaga 324  Q
    |||||||||||||||||||||  ||||||||||||||| | |||||| |||||||||  |||||||||||||||||| ||||||| ||| |||||| |||    
T  76667 gttagcctgtaaatttaacaggctcatttaatatggtcaaaatttgtatgaccttttttactttgcaggaatcgaagtgctttctcattgcaattgaaga 76766  T
Q  325 atctcgacgaa 335  Q
    |||||||||||    
T  76767 atctcgacgaa 76777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 58; Significance: 4e-24; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 394 - 519
Target Start/End: Complemental strand, 269883 - 269759
Alignment:
Q  394 tcacgtcgaagacaagcaaaagagcgggaaaacacgatatcaagcaatgaggcagtttccttttagtagaaaatgtgggacaaatagttgtccaagatgg 493  Q
    |||||||||||||||| ||||| | |||||| |||||| |||||||| ||| | ||||||| ||| | ||||| ||||||||| ||| ||||||||||||    
T  269883 tcacgtcgaagacaagaaaaag-gtgggaaagcacgatttcaagcaaagagacggtttcctattaatggaaaacgtgggacaagtagctgtccaagatgg 269785  T
Q  494 aggaagtgttgatcatgggcttagtg 519  Q
    |||||||| ||| |||||||||||||    
T  269784 aggaagtgctgaacatgggcttagtg 269759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 223123 - 223051
Alignment:
Q  229 tagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 301  Q
    |||||||||| ||  ||||  ||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  223123 tagcctgtaatttcgacaggctcatttaatatggtcaacatttggttgacctttaactttgcaggaatcgaag 223051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 507
Target Start/End: Complemental strand, 50613 - 50585
Alignment:
Q  479 agttgtccaagatggaggaagtgttgatc 507  Q
    |||||||||||||||||||||||||||||    
T  50613 agttgtccaagatggaggaagtgttgatc 50585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 61982 - 61901
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttc 308  Q
    |||||| ||||| ||| ||||  |||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||    
T  61982 gttagcgtgtaagtttcacaggctcatttaatatggtcgacatatgtttgacctttaacattgcaggaatcgaagagctttc 61901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 18013 - 18092
Alignment:
Q  228 ttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagcttt 307  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||| |||||| |||| | || ||||||||||||||    
T  18013 ttagcctgtaaatttgatagactcatttaatatggtcgacatttgtttaacctttaacttcggagaaatcgaagagcttt 18092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 297
Target Start/End: Complemental strand, 17708 - 17638
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatc 297  Q
    ||||||||||||||| ||||   | ||||||||||||| ||||||||||||||||||||||||||||||||    
T  17708 gttagcctgtaaattcaacaagcttatttaatatggtcaacatttgtttgaccttttactttgcaggaatc 17638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 40017 - 40082
Alignment:
Q  250 tcatttaatatggtcga-catttgtttgaccttttactttgcaggaatcgaagagctttcttattt 314  Q
    ||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||| ||||    
T  40017 tcatttaatatggtcaaacatttgtttgacctttaactttgcaggaatcgaagagctttctcattt 40082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 511
Target Start/End: Original strand, 40247 - 40279
Alignment:
Q  479 agttgtccaagatggaggaagtgttgatcatgg 511  Q
    ||||||||||||||||||||||| |||||||||    
T  40247 agttgtccaagatggaggaagtgatgatcatgg 40279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 19956 - 20019
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    ||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||    
T  19956 cagagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaataccact 20019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 332
Target Start/End: Complemental strand, 184891 - 184810
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaattggagaatctcgac 332  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||||| |||| |||| ||| || |||||    
T  184891 tcatttaatatggtcaacatttggttgacctttaactttgcaggaatcgaag-gctttctcatttaaatttgaggatttcgac 184810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 518
Target Start/End: Complemental strand, 184664 - 184626
Alignment:
Q  480 gttgtccaagatggaggaagtgttgatcatgggcttagt 518  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  184664 gttgtccatgatggaggaagtgttgatcatgggattagt 184626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 38735 - 38672
Alignment:
Q  234 tgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatc 297  Q
    |||||||| || ||| ||||||||||||||| ||||||||||||||| ||||||||| ||||||    
T  38735 tgtaaattcaatagactcatttaatatggtcaacatttgtttgacctcttactttgctggaatc 38672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 16817 - 16871
Alignment:
Q  81 gataaatcgtgaaagaatattgggaaaatatatttgatatgaatctccatttatc 135  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||| ||||    
T  16817 gataaatcttgaaagaatattggaaaaatatatttgatataaatctccatctatc 16871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 234 - 310
Target Start/End: Original strand, 36807 - 36884
Alignment:
Q  234 tgtaaatttaacagaatcatttaatatggtcgacatttgtttg-accttttac-tttgcaggaatcgaagagctttctt 310  Q
    |||||||| |||||  ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  36807 tgtaaattcaacaggctcatttaatatggtcaacatttgtttgtaccttttacttttgcaggaatcgaa-agctttctt 36884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 15319 - 15379
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    |||||||||||||||||||||| || || ||||| ||||||||| || |||||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 15379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1587 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1587
Description:

Target: scaffold1587; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 1394 - 1441
Alignment:
Q  250 tcatttaatatggtcgacatttgtttgaccttttactttgcaggaatc 297  Q
    ||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  1394 tcattgaatatggtcaacatttgtttgaccttttactttgtaggaatc 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1156 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1156
Description:

Target: scaffold1156; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 853 - 918
Alignment:
Q  253 tttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaagagctttcttatttcaatt 319  Q
    |||||||||||| |||||||  |||||||| |||||||| ||||||||| ||||||| |||||||||    
T  853 tttaatatggtcaacatttggatgacctttaactttgcaagaatcgaag-gctttctcatttcaatt 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 11610 - 11548
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    |||||||||||||||||||||||| || || ||||| ||||||||  || |||||||||||||    
T  11610 cagagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccac 11548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 2468 - 2526
Alignment:
Q  15 gagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||||||| || ||||| ||||||||  ||||| ||||||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccac 2526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 470 - 519
Target Start/End: Complemental strand, 1511 - 1462
Alignment:
Q  470 gggacaaatagttgtccaagatggaggaagtgttgatcatgggcttagtg 519  Q
    ||||||| | |||||||||||||||||||||| |||||||||| ||||||    
T  1511 gggacaagtggttgtccaagatggaggaagtggtgatcatggggttagtg 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 109988 - 110061
Alignment:
Q  94 agaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcc 167  Q
    |||||||||||||||| |||||||||||||||| ||| ||| || ||||||  |||| |||||| |||| ||||    
T  109988 agaatattgggaaaatctatttgatatgaatcttcatctattataaattgtattgagccaacttgtttacagcc 110061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 13042 - 13102
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    ||||||||||||||||||||||||| || ||||| ||||||||  |  |||||||||||||    
T  13042 gagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccac 13102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 224
Target Start/End: Original strand, 10121 - 10246
Alignment:
Q  91 gaaagaatattgggaaaatatatttgatatgaatctccatttatcattaattgtgatgagtcaacttatttaaagcccataagactgattatcaattgat 190  Q
    ||||||||||||||||||| |||||||||| ||||| ||| ||| || ||||||  |||| |||||| ||||         || ||||||||||||||||    
T  10121 gaaagaatattgggaaaatctatttgatataaatcttcatctattataaattgtattgagccaacttgttta--------caggctgattatcaattgat 10212  T
Q  191 ggattcgtttttcaaatattagaaggagataata 224  Q
    | ||| ||||| | ||||||||  ||||||||||    
T  10213 gaattagttttcccaatattagggggagataata 10246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 38898 - 38958
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccac 73  Q
    |||| |||||||| ||||| ||| |||||||||||||||| ||| || |||||||||||||    
T  38898 gagaaaatcgaacgtgagatcttaaagatgagcatactcctaggtcccaagccaataccac 38958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 517
Target Start/End: Complemental strand, 18481 - 18434
Alignment:
Q  470 gggacaaatagttgtccaagatggaggaagtgttgatcatgggcttag 517  Q
    |||||||  ||||||||||||||||||||||| |||||||||| ||||    
T  18481 gggacaagcagttgtccaagatggaggaagtgctgatcatgggattag 18434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 517
Target Start/End: Complemental strand, 26373 - 26326
Alignment:
Q  470 gggacaaatagttgtccaagatggaggaagtgttgatcatgggcttag 517  Q
    |||||||  ||||||||||||||||||||||| |||||||||| ||||    
T  26373 gggacaagcagttgtccaagatggaggaagtgctgatcatgggattag 26326  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 94965 - 95028
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataccact 74  Q
    |||||| ||| |||||||||||||||| || ||||| |||||||||  | ||||||||||||||    
T  94965 cagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccact 95028  T

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Target: scaffold0059 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 510
Target Start/End: Complemental strand, 29503 - 29473
Alignment:
Q  480 gttgtccaagatggaggaagtgttgatcatg 510  Q
    |||||||||||||||||||||||||||||||    
T  29503 gttgtccaagatggaggaagtgttgatcatg 29473  T

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Target: scaffold0059; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 29753 - 29679
Alignment:
Q  227 gttagcctgtaaatttaacagaatcatttaatatggtcgacatttgtttgaccttttactttgcaggaatcgaag 301  Q
    |||||||||||| ||  ||||  ||||||||| ||||| ||||||  ||||| ||| ||||||||||||||||||    
T  29753 gttagcctgtaatttcgacagggtcatttaatgtggtcaacatttagttgacttttaactttgcaggaatcgaag 29679  T

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Target: scaffold0238 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 2705 - 2746
Alignment:
Q  11 cagagagaatcgaacctgagaccttgaagatgagcatactcc 52  Q
    ||||||||||||||||||||||||||| || ||||| |||||    
T  2705 cagagagaatcgaacctgagaccttgaggaggagcagactcc 2746  T

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Target: scaffold0047 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 14968 - 15023
Alignment:
Q  13 gagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaata 69  Q
    ||||||||||||||||||| ||||| || ||||||||||||||  || |||||||||    
T  14968 gagagaatcgaacctgaga-cttgaggaggagcatactcccagttcctaagccaata 15023  T

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