View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19067_low_3 (Length: 512)

Name: NF19067_low_3
Description: NF19067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19067_low_3
NF19067_low_3
[»] scaffold0185 (3 HSPs)
scaffold0185 (145-487)||(3750-4093)
scaffold0185 (11-63)||(3616-3668)
scaffold0185 (330-404)||(4106-4180)
[»] chr7 (66 HSPs)
chr7 (261-497)||(23704805-23705041)
chr7 (258-501)||(12006535-12006778)
chr7 (258-497)||(20458686-20458925)
chr7 (266-501)||(10409514-10409749)
chr7 (266-502)||(20419538-20419775)
chr7 (261-501)||(48672274-48672517)
chr7 (266-501)||(41599960-41600196)
chr7 (266-497)||(38879725-38879958)
chr7 (266-486)||(44816833-44817058)
chr7 (266-497)||(31851243-31851473)
chr7 (266-459)||(25772366-25772559)
chr7 (266-501)||(28218180-28218401)
chr7 (329-486)||(23383566-23383723)
chr7 (266-459)||(48648264-48648457)
chr7 (329-497)||(20963561-20963729)
chr7 (266-486)||(33162690-33162912)
chr7 (329-490)||(24194942-24195108)
chr7 (267-490)||(7657972-7658196)
chr7 (348-497)||(1250291-1250440)
chr7 (266-404)||(41600195-41600334)
chr7 (266-404)||(16995202-16995340)
chr7 (418-490)||(6466005-6466077)
chr7 (266-404)||(23704664-23704802)
chr7 (261-404)||(12006777-12006921)
chr7 (266-384)||(28218420-28218539)
chr7 (266-404)||(38879961-38880097)
chr7 (266-384)||(48672536-48672655)
chr7 (266-404)||(6465857-6465995)
chr7 (266-384)||(20419793-20419913)
chr7 (266-375)||(20963760-20963869)
chr7 (266-404)||(23383737-23383876)
chr7 (265-404)||(48648466-48648604)
chr7 (329-404)||(1250443-1250518)
chr7 (261-404)||(25772568-25772712)
chr7 (419-459)||(28218257-28218297)
chr7 (419-459)||(44816913-44816953)
chr7 (266-320)||(7658287-7658341)
chr7 (266-316)||(24195198-24195248)
chr7 (422-459)||(12006803-12006840)
chr7 (329-378)||(20458954-20459003)
chr7 (422-459)||(23704739-23704776)
chr7 (422-459)||(28218426-28218463)
chr7 (422-459)||(38879987-38880024)
chr7 (422-459)||(41600221-41600258)
chr7 (419-459)||(12006618-12006658)
chr7 (419-459)||(16995277-16995317)
chr7 (419-455)||(20458773-20458809)
chr7 (419-459)||(20963573-20963613)
chr7 (419-459)||(23704921-23704961)
chr7 (419-459)||(38879802-38879842)
chr7 (422-458)||(48672542-48672578)
chr7 (266-320)||(6466127-6466181)
chr7 (269-315)||(31852157-31852203)
chr7 (430-459)||(7842517-7842546)
chr7 (422-459)||(20419799-20419836)
chr7 (422-455)||(20458954-20458987)
chr7 (423-459)||(24194941-24194978)
chr7 (422-459)||(25772594-25772631)
chr7 (422-454)||(6465937-6465969)
chr7 (419-459)||(20419614-20419654)
chr7 (346-382)||(20963650-20963686)
chr7 (419-459)||(24195056-24195096)
chr7 (332-384)||(31851496-31851548)
chr7 (419-459)||(41600036-41600076)
chr7 (348-404)||(44817072-44817128)
chr7 (419-455)||(48672361-48672397)
[»] chr2 (62 HSPs)
chr2 (266-497)||(23806096-23806328)
chr2 (253-501)||(15106207-15106454)
chr2 (266-501)||(17850589-17850824)
chr2 (258-497)||(26560550-26560788)
chr2 (266-497)||(17463235-17463467)
chr2 (258-486)||(19251625-19251853)
chr2 (329-497)||(22263257-22263425)
chr2 (266-459)||(26236277-26236470)
chr2 (345-497)||(39878246-39878398)
chr2 (340-497)||(13284485-13284642)
chr2 (329-484)||(20498902-20499057)
chr2 (346-490)||(33290200-33290344)
chr2 (332-497)||(42670788-42670953)
chr2 (395-497)||(23854798-23854900)
chr2 (266-497)||(26135961-26136193)
chr2 (268-459)||(30390463-30390655)
chr2 (269-384)||(19251476-19251591)
chr2 (266-404)||(42670956-42671095)
chr2 (345-439)||(13254638-13254732)
chr2 (259-404)||(20498742-20498886)
chr2 (266-404)||(17850823-17850962)
chr2 (275-404)||(26135828-26135958)
chr2 (248-402)||(34548558-34548712)
chr2 (269-372)||(23854693-23854797)
chr2 (266-404)||(39878105-39878243)
chr2 (330-404)||(23854903-23854977)
chr2 (266-404)||(22263428-22263569)
chr2 (269-406)||(12418958-12419095)
chr2 (269-406)||(12431018-12431155)
chr2 (418-459)||(13284667-13284708)
chr2 (269-406)||(30959907-30960044)
chr2 (266-393)||(15106069-15106197)
chr2 (261-404)||(26236124-26236268)
chr2 (266-317)||(26560880-26560931)
chr2 (269-320)||(30958689-30958740)
chr2 (418-456)||(13254695-13254733)
chr2 (266-404)||(17463094-17463232)
chr2 (422-459)||(17850849-17850886)
chr2 (276-320)||(13284735-13284779)
chr2 (419-459)||(15106327-15106367)
chr2 (419-459)||(23806212-23806252)
chr2 (419-459)||(26236355-26236395)
chr2 (423-459)||(26560632-26560668)
chr2 (419-459)||(30390537-30390577)
chr2 (269-320)||(42670722-42670773)
chr2 (259-384)||(13254492-13254618)
chr2 (418-464)||(39878361-39878407)
chr2 (267-320)||(13254758-13254811)
chr2 (418-459)||(13284486-13284527)
chr2 (418-459)||(17463169-17463210)
chr2 (422-459)||(19251548-19251585)
chr2 (418-459)||(20499004-20499045)
chr2 (345-382)||(22263346-22263383)
chr2 (422-459)||(22263454-22263491)
chr2 (345-382)||(23854821-23854858)
chr2 (266-303)||(23855033-23855070)
chr2 (422-459)||(26135895-26135932)
chr2 (422-459)||(26236205-26236242)
chr2 (330-367)||(44098896-44098933)
chr2 (333-401)||(13284648-13284716)
chr2 (423-459)||(22263269-22263305)
chr2 (348-404)||(26560791-26560847)
[»] chr8 (54 HSPs)
chr8 (266-501)||(43851667-43851902)
chr8 (272-490)||(42112993-42113211)
chr8 (269-497)||(10108514-10108743)
chr8 (266-501)||(7689663-7689899)
chr8 (266-490)||(17622892-17623114)
chr8 (269-497)||(21147941-21148170)
chr8 (275-501)||(30789519-30789745)
chr8 (329-497)||(14767573-14767741)
chr8 (329-497)||(22494528-22494696)
chr8 (266-497)||(26136829-26137060)
chr8 (272-497)||(5555013-5555239)
chr8 (269-497)||(14820438-14820667)
chr8 (329-497)||(26532849-26533017)
chr8 (266-497)||(42605897-42606129)
chr8 (329-497)||(2583464-2583632)
chr8 (357-497)||(43481408-43481548)
chr8 (266-404)||(10108372-10108511)
chr8 (266-404)||(14820297-14820435)
chr8 (266-404)||(30789744-30789883)
chr8 (259-404)||(5554864-5555010)
chr8 (267-404)||(17623124-17623261)
chr8 (260-401)||(10171383-10171525)
chr8 (266-393)||(42113232-42113357)
chr8 (260-384)||(7689520-7689644)
chr8 (345-485)||(22848400-22848540)
chr8 (266-404)||(2583322-2583461)
chr8 (266-404)||(21148173-21148312)
chr8 (266-320)||(14767826-14767880)
chr8 (258-316)||(20875692-20875750)
chr8 (419-459)||(26136945-26136985)
chr8 (266-316)||(18044153-18044203)
chr8 (418-455)||(30789589-30789626)
chr8 (419-459)||(7689783-7689823)
chr8 (423-459)||(21148015-21148051)
chr8 (419-459)||(22494644-22494684)
chr8 (260-320)||(35367406-35367466)
chr8 (332-404)||(42605822-42605894)
chr8 (419-459)||(43851742-43851782)
chr8 (266-374)||(43481581-43481691)
chr8 (425-459)||(30789773-30789807)
chr8 (422-459)||(7689601-7689638)
chr8 (422-459)||(10108448-10108485)
chr8 (345-382)||(10108556-10108593)
chr8 (422-459)||(14820372-14820409)
chr8 (269-318)||(20877069-20877118)
chr8 (418-459)||(42113062-42113103)
chr8 (419-459)||(2583580-2583620)
chr8 (423-459)||(5555133-5555169)
chr8 (423-459)||(10108634-10108670)
chr8 (419-459)||(10171403-10171443)
chr8 (423-459)||(14767585-14767621)
chr8 (423-459)||(14820558-14820594)
chr8 (419-455)||(17622969-17623005)
chr8 (422-458)||(42605832-42605868)
[»] chr3 (79 HSPs)
chr3 (253-487)||(16722145-16722380)
chr3 (269-497)||(30500048-30500275)
chr3 (266-501)||(14171589-14171824)
chr3 (259-498)||(43572534-43572773)
chr3 (266-497)||(4204711-4204942)
chr3 (259-497)||(21633040-21633279)
chr3 (266-497)||(45970059-45970292)
chr3 (269-497)||(14162015-14162243)
chr3 (266-497)||(49986672-49986904)
chr3 (266-486)||(9266977-9267198)
chr3 (266-487)||(20853697-20853920)
chr3 (266-497)||(19112766-19112999)
chr3 (255-497)||(52552681-52552922)
chr3 (329-497)||(15328604-15328772)
chr3 (266-501)||(33372546-33372780)
chr3 (258-477)||(35995672-35995892)
chr3 (261-497)||(45003640-45003876)
chr3 (269-497)||(14262041-14262270)
chr3 (259-497)||(17465362-17465601)
chr3 (330-495)||(38283696-38283861)
chr3 (269-497)||(5800749-5800977)
chr3 (329-497)||(47575339-47575506)
chr3 (430-501)||(11003872-11003943)
chr3 (266-404)||(5800607-5800746)
chr3 (258-404)||(14171823-14171970)
chr3 (266-404)||(14262273-14262412)
chr3 (258-404)||(9267212-9267358)
chr3 (260-406)||(43572385-43572535)
chr3 (329-404)||(14161937-14162012)
chr3 (266-393)||(30500289-30500416)
chr3 (329-404)||(52552925-52553000)
chr3 (250-384)||(20853953-20854086)
chr3 (258-404)||(33372400-33372547)
chr3 (266-404)||(45969917-45970056)
chr3 (266-404)||(35995915-35996051)
chr3 (266-404)||(16721993-16722132)
chr3 (266-404)||(19113002-19113141)
chr3 (269-320)||(27946114-27946165)
chr3 (266-320)||(15328465-15328519)
chr3 (418-459)||(4204786-4204827)
chr3 (418-459)||(43572650-43572691)
chr3 (266-402)||(45003498-45003635)
chr3 (419-459)||(21633156-21633196)
chr3 (419-459)||(35995756-35995796)
chr3 (266-384)||(11003734-11003853)
chr3 (331-406)||(32998369-32998444)
chr3 (276-379)||(36990922-36991025)
chr3 (276-379)||(37016362-37016465)
chr3 (260-384)||(49986523-49986649)
chr3 (266-320)||(19720335-19720389)
chr3 (266-320)||(27946187-27946241)
chr3 (422-459)||(20853959-20853996)
chr3 (422-459)||(32998397-32998434)
chr3 (422-459)||(43572467-43572504)
chr3 (329-390)||(45058742-45058803)
chr3 (419-459)||(9267053-9267093)
chr3 (423-459)||(14262114-14262150)
chr3 (332-404)||(47575509-47575581)
chr3 (266-404)||(21632903-21633037)
chr3 (276-379)||(35740829-35740931)
chr3 (422-459)||(14161949-14161986)
chr3 (345-382)||(14262191-14262228)
chr3 (422-459)||(21632974-21633011)
chr3 (422-459)||(33372484-33372521)
chr3 (422-459)||(45003574-45003611)
chr3 (269-317)||(3425973-3426021)
chr3 (423-459)||(14162135-14162171)
chr3 (419-459)||(14171664-14171704)
chr3 (423-459)||(15328724-15328760)
chr3 (423-459)||(16722069-16722105)
chr3 (454-490)||(16722174-16722209)
chr3 (423-459)||(16722255-16722291)
chr3 (422-458)||(19113028-19113064)
chr3 (419-459)||(20853774-20853814)
chr3 (423-459)||(30500119-30500155)
chr3 (346-382)||(38283737-38283773)
chr3 (419-459)||(45003756-45003796)
chr3 (427-459)||(45970183-45970215)
chr3 (423-459)||(52552770-52552806)
[»] scaffold0361 (3 HSPs)
scaffold0361 (259-497)||(4707-4945)
scaffold0361 (266-320)||(4564-4618)
scaffold0361 (419-459)||(4823-4863)
[»] chr4 (81 HSPs)
chr4 (259-497)||(9396843-9397081)
chr4 (266-501)||(38573971-38574206)
chr4 (266-501)||(46046432-46046662)
chr4 (266-497)||(9516612-9516844)
chr4 (269-497)||(4356025-4356253)
chr4 (329-497)||(15640859-15641027)
chr4 (266-497)||(31090062-31090295)
chr4 (264-486)||(48259906-48260128)
chr4 (333-501)||(7819154-7819322)
chr4 (266-497)||(3273766-3273994)
chr4 (269-486)||(3018167-3018383)
chr4 (266-497)||(34063984-34064216)
chr4 (266-490)||(9619130-9619355)
chr4 (267-497)||(13131943-13132175)
chr4 (266-501)||(31944090-31944326)
chr4 (329-497)||(37012773-37012941)
chr4 (345-497)||(18667433-18667585)
chr4 (269-497)||(18713104-18713335)
chr4 (269-497)||(48579871-48580100)
chr4 (267-446)||(35376322-35376502)
chr4 (266-459)||(26252418-26252613)
chr4 (267-404)||(9396702-9396840)
chr4 (266-404)||(13132178-13132315)
chr4 (267-404)||(3018014-3018153)
chr4 (261-404)||(9618977-9619121)
chr4 (266-400)||(35376165-35376299)
chr4 (266-401)||(31090301-31090437)
chr4 (261-404)||(3273618-3273763)
chr4 (272-384)||(15640724-15640836)
chr4 (269-404)||(4355887-4356022)
chr4 (266-384)||(9516867-9516986)
chr4 (329-404)||(34064219-34064294)
chr4 (266-404)||(46046661-46046799)
chr4 (266-404)||(37012944-37013082)
chr4 (267-384)||(38574225-38574343)
chr4 (269-406)||(36888915-36889051)
chr4 (454-497)||(26252412-26252455)
chr4 (266-320)||(31218303-31218357)
chr4 (266-387)||(12904749-12904870)
chr4 (332-404)||(26252337-26252409)
chr4 (329-404)||(7819080-7819155)
chr4 (260-384)||(31943946-31944071)
chr4 (269-320)||(36887685-36887736)
chr4 (266-316)||(41947180-41947230)
chr4 (282-320)||(43312227-43312265)
chr4 (422-459)||(9619058-9619095)
chr4 (418-459)||(15640974-15641015)
chr4 (422-459)||(26252346-26252383)
chr4 (422-459)||(36888943-36888980)
chr4 (266-319)||(41946967-41947020)
chr4 (422-459)||(43312287-43312324)
chr4 (418-458)||(3273879-3273919)
chr4 (419-459)||(7819274-7819314)
chr4 (419-459)||(31090139-31090179)
chr4 (419-455)||(34064064-34064100)
chr4 (419-459)||(35376388-35376428)
chr4 (423-459)||(37012785-37012821)
chr4 (419-459)||(38574046-38574086)
chr4 (329-404)||(18713026-18713101)
chr4 (329-384)||(48580123-48580178)
chr4 (269-311)||(46935170-46935212)
chr4 (266-320)||(48259825-48259879)
chr4 (274-320)||(51029095-51029141)
chr4 (422-459)||(3018090-3018127)
chr4 (422-459)||(3273700-3273737)
chr4 (422-459)||(7819092-7819129)
chr4 (422-459)||(9516873-9516910)
chr4 (422-459)||(31090324-31090361)
chr4 (341-382)||(38574123-38574164)
chr4 (422-459)||(38574231-38574268)
chr4 (422-459)||(46046687-46046724)
chr4 (346-382)||(4356068-4356104)
chr4 (419-459)||(9396959-9396999)
chr4 (419-459)||(9516688-9516728)
chr4 (418-454)||(13132024-13132060)
chr4 (423-459)||(13132205-13132241)
chr4 (331-403)||(20069538-20069610)
chr4 (419-459)||(26252497-26252537)
chr4 (423-455)||(34064246-34064278)
chr4 (346-382)||(37012862-37012898)
chr4 (419-459)||(46046502-46046542)
[»] chr5 (69 HSPs)
chr5 (269-497)||(7125923-7126151)
chr5 (329-497)||(20709278-20709446)
chr5 (266-497)||(23979046-23979277)
chr5 (260-497)||(14144045-14144283)
chr5 (266-497)||(6817125-6817355)
chr5 (266-497)||(24837171-24837403)
chr5 (266-497)||(993752-993980)
chr5 (266-497)||(31799642-31799874)
chr5 (259-497)||(17762426-17762665)
chr5 (266-497)||(4918991-4919224)
chr5 (266-497)||(24650704-24650933)
chr5 (282-487)||(41001374-41001577)
chr5 (329-497)||(29444950-29445118)
chr5 (266-459)||(18336638-18336831)
chr5 (259-459)||(14411847-14412048)
chr5 (277-497)||(22571090-22571311)
chr5 (329-497)||(24074447-24074614)
chr5 (266-404)||(14143904-14144042)
chr5 (269-459)||(27158996-27159185)
chr5 (266-434)||(30512290-30512459)
chr5 (266-434)||(30552630-30552799)
chr5 (261-404)||(24074300-24074444)
chr5 (266-404)||(17762285-17762423)
chr5 (260-404)||(14411693-14411838)
chr5 (260-404)||(7126154-7126299)
chr5 (266-404)||(24837406-24837545)
chr5 (266-384)||(41001610-41001728)
chr5 (268-404)||(29444810-29444947)
chr5 (266-402)||(993985-994121)
chr5 (454-497)||(14411841-14411884)
chr5 (269-404)||(27159194-27159327)
chr5 (266-384)||(18336469-18336589)
chr5 (419-463)||(30512361-30512405)
chr5 (419-463)||(30552701-30552745)
chr5 (454-497)||(27159148-27159191)
chr5 (418-459)||(6817200-6817241)
chr5 (418-459)||(20709290-20709331)
chr5 (413-454)||(20947056-20947097)
chr5 (418-459)||(23979160-23979201)
chr5 (419-459)||(4919068-4919108)
chr5 (423-459)||(27159068-27159104)
chr5 (423-459)||(31799718-31799754)
chr5 (416-459)||(994003-994046)
chr5 (331-402)||(41424584-41424655)
chr5 (330-384)||(6817378-6817432)
chr5 (422-456)||(17762363-17762397)
chr5 (418-460)||(20947011-20947053)
chr5 (266-316)||(24651025-24651075)
chr5 (345-382)||(4919145-4919182)
chr5 (345-382)||(7126072-7126109)
chr5 (422-459)||(7126180-7126217)
chr5 (418-459)||(14143979-14144020)
chr5 (419-452)||(17762542-17762575)
chr5 (426-459)||(20959358-20959391)
chr5 (418-455)||(22571159-22571196)
chr5 (268-404)||(31799877-31800013)
chr5 (422-459)||(41001616-41001653)
chr5 (418-459)||(41424594-41424635)
chr5 (419-459)||(993825-993865)
chr5 (423-459)||(7125995-7126031)
chr5 (346-382)||(14144088-14144124)
chr5 (423-459)||(14144165-14144201)
chr5 (422-454)||(14411780-14411812)
chr5 (419-459)||(14411926-14411966)
chr5 (454-490)||(18336639-18336674)
chr5 (423-459)||(18336720-18336756)
chr5 (419-459)||(24837247-24837287)
chr5 (423-459)||(29445070-29445106)
chr5 (419-459)||(41001431-41001471)
[»] chr1 (69 HSPs)
chr1 (276-497)||(42510027-42510248)
chr1 (269-497)||(20995813-20996040)
chr1 (266-501)||(39826052-39826288)
chr1 (258-497)||(48072105-48072345)
chr1 (269-497)||(17606452-17606679)
chr1 (266-497)||(30299375-30299607)
chr1 (266-497)||(4906964-4907196)
chr1 (266-497)||(39711216-39711448)
chr1 (329-497)||(52058077-52058245)
chr1 (329-486)||(24467783-24467939)
chr1 (260-490)||(33628686-33628917)
chr1 (332-497)||(13229876-13230040)
chr1 (266-490)||(39970647-39970872)
chr1 (346-497)||(43539491-43539642)
chr1 (333-473)||(7473862-7474002)
chr1 (329-497)||(8292948-8293119)
chr1 (266-458)||(34749140-34749332)
chr1 (268-486)||(18462440-18462658)
chr1 (266-490)||(29696715-29696933)
chr1 (266-404)||(18462288-18462426)
chr1 (266-404)||(24467631-24467769)
chr1 (267-402)||(17606307-17606447)
chr1 (266-393)||(52058256-52058384)
chr1 (395-486)||(215044-215135)
chr1 (329-404)||(4907199-4907274)
chr1 (266-384)||(29696567-29696685)
chr1 (266-404)||(39711076-39711213)
chr1 (266-375)||(39826312-39826422)
chr1 (266-401)||(30299234-30299369)
chr1 (287-401)||(16294187-16294302)
chr1 (266-404)||(34749342-34749481)
chr1 (262-404)||(43539345-43539488)
chr1 (269-401)||(33628930-33629063)
chr1 (266-404)||(8292806-8292945)
chr1 (266-320)||(18342339-18342393)
chr1 (418-459)||(24467886-24467927)
chr1 (266-400)||(39970886-39971022)
chr1 (418-459)||(52058089-52058130)
chr1 (331-406)||(17501965-17502040)
chr1 (454-497)||(34749297-34749339)
chr1 (422-459)||(4907225-4907262)
chr1 (422-459)||(17501993-17502030)
chr1 (422-459)||(24467706-24467743)
chr1 (422-459)||(33628953-33628990)
chr1 (422-459)||(52058271-52058308)
chr1 (419-459)||(4907040-4907080)
chr1 (419-459)||(8293067-8293107)
chr1 (419-459)||(29696818-29696858)
chr1 (419-459)||(30299491-30299531)
chr1 (419-459)||(39826128-39826168)
chr1 (419-454)||(39970729-39970764)
chr1 (269-320)||(43539669-43539720)
chr1 (260-314)||(16294045-16294099)
chr1 (418-456)||(17606389-17606427)
chr1 (266-320)||(20995700-20995754)
chr1 (425-459)||(39826312-39826346)
chr1 (418-455)||(7473874-7473911)
chr1 (266-315)||(13230059-13230108)
chr1 (418-459)||(16294206-16294247)
chr1 (345-382)||(17606494-17606531)
chr1 (422-459)||(18462363-18462400)
chr1 (418-459)||(18462543-18462584)
chr1 (418-459)||(42510092-42510133)
chr1 (423-459)||(17606572-17606608)
chr1 (419-459)||(33628768-33628808)
chr1 (419-459)||(34749215-34749255)
chr1 (422-458)||(34749368-34749404)
chr1 (419-459)||(39711332-39711372)
chr1 (345-385)||(42510166-42510206)
[»] chr6 (46 HSPs)
chr6 (266-490)||(18500317-18500542)
chr6 (266-497)||(24732082-24732313)
chr6 (266-490)||(26385280-26385505)
chr6 (329-497)||(33714553-33714721)
chr6 (330-496)||(14680949-14681115)
chr6 (267-497)||(30458903-30459135)
chr6 (330-497)||(30618106-30618272)
chr6 (329-497)||(9481326-9481494)
chr6 (274-458)||(32017550-32017731)
chr6 (345-497)||(2299393-2299543)
chr6 (268-497)||(10321737-10321965)
chr6 (340-459)||(33637709-33637829)
chr6 (395-490)||(3229995-3230090)
chr6 (423-490)||(17142798-17142865)
chr6 (266-404)||(9481184-9481323)
chr6 (266-393)||(32017752-32017879)
chr6 (330-410)||(9854118-9854198)
chr6 (423-490)||(18500506-18500574)
chr6 (267-320)||(26385596-26385649)
chr6 (329-392)||(19284195-19284258)
chr6 (330-384)||(17142744-17142798)
chr6 (266-316)||(18500655-18500705)
chr6 (266-320)||(24731937-24731991)
chr6 (454-496)||(33637704-33637746)
chr6 (266-404)||(30617969-30618103)
chr6 (422-459)||(19284207-19284244)
chr6 (336-404)||(10321968-10322036)
chr6 (419-459)||(18500392-18500432)
chr6 (454-497)||(32017696-32017738)
chr6 (258-320)||(2299635-2299697)
chr6 (269-365)||(9154884-9154982)
chr6 (423-460)||(17142829-17142867)
chr6 (266-299)||(3229962-3229995)
chr6 (418-459)||(9854146-9854187)
chr6 (330-367)||(15942410-15942447)
chr6 (453-490)||(17142797-17142833)
chr6 (422-459)||(24732016-24732053)
chr6 (345-382)||(30618147-30618184)
chr6 (345-382)||(32017691-32017728)
chr6 (422-459)||(32017767-32017804)
chr6 (341-382)||(33714642-33714683)
chr6 (423-459)||(9481446-9481482)
chr6 (332-384)||(24732007-24732059)
chr6 (419-459)||(24732198-24732238)
chr6 (419-459)||(26385356-26385396)
chr6 (419-459)||(33714565-33714605)
[»] scaffold0141 (3 HSPs)
scaffold0141 (329-501)||(8463-8634)
scaffold0141 (258-317)||(8319-8378)
scaffold0141 (419-459)||(8582-8622)
[»] scaffold0809 (4 HSPs)
scaffold0809 (266-497)||(1554-1782)
scaffold0809 (255-401)||(1402-1548)
scaffold0809 (422-459)||(1488-1525)
scaffold0809 (421-459)||(1672-1710)
[»] scaffold0881 (2 HSPs)
scaffold0881 (348-486)||(305-443)
scaffold0881 (419-452)||(305-338)
[»] scaffold0477 (3 HSPs)
scaffold0477 (330-464)||(4924-5059)
scaffold0477 (259-316)||(4875-4932)
scaffold0477 (419-459)||(5008-5048)
[»] scaffold0048 (1 HSPs)
scaffold0048 (168-263)||(62344-62440)
[»] scaffold0449 (4 HSPs)
scaffold0449 (329-454)||(7292-7422)
scaffold0449 (454-497)||(7390-7433)
scaffold0449 (266-374)||(7466-7576)
scaffold0449 (419-459)||(7304-7344)
[»] scaffold0117 (2 HSPs)
scaffold0117 (269-404)||(12219-12355)
scaffold0117 (425-459)||(12248-12282)
[»] scaffold0176 (2 HSPs)
scaffold0176 (430-487)||(15800-15857)
scaffold0176 (260-404)||(15869-16010)
[»] scaffold0352 (5 HSPs)
scaffold0352 (266-320)||(6001-6055)
scaffold0352 (423-459)||(4745-4781)
scaffold0352 (422-459)||(5941-5978)
scaffold0352 (261-318)||(4664-4721)
scaffold0352 (454-490)||(4746-4781)


Alignment Details
Target: scaffold0185 (Bit Score: 223; Significance: 1e-122; HSPs: 3)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 145 - 487
Target Start/End: Original strand, 3750 - 4093
Alignment:
Q  145 ggacaaatggatcctannnnnnnagttatagaaaatcatttgaagtaatttttaggtactgttatttaaaacgtgtaataaatggatgaaaacttcaaaa 244  Q
    ||||||||||||||||       |||||||||||||||||||||||| ||||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  3750 ggacaaatggatcctatttttttagttatagaaaatcatttgaagtagtttttacataccgttatttaaaacgtgtaataaatggatgaaaacttcaaaa 3849  T
Q  245 attattatatttgtttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtc 343  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||||||||    
T  3850 attattatatttgtttttagggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtc 3949  T
Q  344 tctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaat 443  Q
     |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||    
T  3950 cctgtaatttcaaattcttccactgttggtcgctcatttcaccatgtcagcagaatctgcacacatggcaagtaaaatgagggaccaaaagtggaggaat 4049  T
Q  444 ctgaaattacagggaccaaaagtgggaggaatctgaaattacag 487  Q
     ||||||||||| |||||||||||||||||||||||||||||||    
T  4050 atgaaattacagtgaccaaaagtgggaggaatctgaaattacag 4093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 3616 - 3668
Alignment:
Q  11 catagggacgaacaactaaagaggaaataacaatcaaagagatgaaccatcat 63  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  3616 catagagacgaacaactaaagaggaattaacaatcaaagagatgaaccatcat 3668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 404
Target Start/End: Complemental strand, 4180 - 4106
Alignment:
Q  330 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||||||||   |||||||||| |||||| || | |||||||||| ||||| || ||||| ||||||||||    
T  4180 atttagattatgttgttgtaatttcagattctttcatttttggtccctcctttcatcacgtcagcagaatctgca 4106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 4e-76; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 261 - 497
Target Start/End: Complemental strand, 23705041 - 23704805
Alignment:
Q  261 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattc 360  Q
    |||| ||||||||||||||| ||| ||||||||||||| |||| || |||||||||||||        |||||||||| |||| ||||||||||| ||||    
T  23705041 ttagggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattc 23704942  T
Q  361 ttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 460  Q
    ||||||| ||||||||||||| ||||| || || |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23704941 ttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 23704842  T
Q  461 aaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||||||||||||| ||||||    
T  23704841 aaaagtgggaggaatctgaaattacagggaagtaatt 23704805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 258 - 501
Target Start/End: Original strand, 12006535 - 12006778
Alignment:
Q  258 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaa 357  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||         | ||||||| |||| ||||||||||| |    
T  12006535 tttttagggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaattagattttgtccctgtaatttcaga 12006634  T
Q  358 ttcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggg 457  Q
    |||||||||| ||| ||||||||| ||||| || || |||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| |    
T  12006635 ttcttccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagtg 12006734  T
Q  458 accaaaagtgggaggaatctgaaattacagggatgtaattgatg 501  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||    
T  12006735 accaaaagtgggaggaatctgaaattacaaggacgtaattgatg 12006778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 258 - 497
Target Start/End: Original strand, 20458686 - 20458925
Alignment:
Q  258 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaa 357  Q
    ||||||| |||||||| | |||| ||||||||||||||| | |||| || |||||||||||||         ||||||||| |||| ||||||||||| |    
T  20458686 tttttagggtaaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgtaaataaaaaatttagattttgtcgctgtaatttcaga 20458785  T
Q  358 ttcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggg 457  Q
    |||||||||| ||||||||||||| ||||| || || |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  20458786 ttcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaagg 20458885  T
Q  458 accaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  20458886 accaaaagcgggaggaatctgaaattacagggacgtaatt 20458925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 266 - 501
Target Start/End: Complemental strand, 10409749 - 10409514
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    |||||||||||||||  ||| |||||||||||| |||| ||||||||||||||||        |||||||||| |||||||||||||| | |||||||||    
T  10409749 gtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtctctgtaattttagattcttcca 10409650  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || ||| ||||||||| ||||| || || |||||||||| ||||| || ||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  10409649 cttttgatccctcattccaccacgttagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatctgaaattacaaggaccaaaag 10409550  T
Q  466 tgggaggaatctgaaattacagggatgtaattgatg 501  Q
    | ||||||||||||||||||| ||| ||||||||||    
T  10409549 taggaggaatctgaaattacaaggacgtaattgatg 10409514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 266 - 502
Target Start/End: Original strand, 20419538 - 20419775
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| |||||| |||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  20419538 gtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 20419637  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    | | ||||||||||||| ||||| || || |||||||||| |||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20419638 atttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggaccaaaa 20419737  T
Q  465 gtgggaggaatctgaaattacagggatgtaattgatga 502  Q
    |||||||||||||||||||||| ||| |||||| ||||    
T  20419738 gtgggaggaatctgaaattacaaggacgtaatttatga 20419775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 261 - 501
Target Start/End: Original strand, 48672274 - 48672517
Alignment:
Q  261 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn---gatttagattatgtctctgtaatttcaaa 357  Q
    |||| ||||||||||||||| ||||||||||||||||  ||||||| |||||||| ||||           ||||||||||  ||||||||||||||| |    
T  48672274 ttagggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtctctgtaaaaaaaaaaagatttagatttcgtctctgtaatttcaga 48672373  T
Q  358 ttcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggg 457  Q
    |||||||||| ||| ||||||||| ||||| ||||| |||||||||| ||||| || ||||||||||||| |||||||||||||||||||||||||| ||    
T  48672374 ttcttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatctgaaattacaagg 48672473  T
Q  458 accaaaagtgggaggaatctgaaattacagggatgtaattgatg 501  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||    
T  48672474 accaaaagtgggaggaatttgaaattacaaggacgtaattgatg 48672517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 266 - 501
Target Start/End: Original strand, 41599960 - 41600196
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaaattcttcc 364  Q
    |||||||||||||||  |||||||||||||||| ||||||| ||||||||| | |          ||||||||| |||| ||||||||||| ||||||||    
T  41599960 gtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtccatataaaaaaaaatatttagattttgtccctgtaatttcagattcttcc 41600059  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||  ||| ||||||||| ||||| || || |||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41600060 acatttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaa 41600159  T
Q  465 gtgggaggaatctgaaattacagggatgtaattgatg 501  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  41600160 gtgggaggaatctgaaattacaaggacgtaattgatg 41600196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 266 - 497
Target Start/End: Original strand, 38879725 - 38879958
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 363  Q
    ||||||||||||||| ||||||||||||||||| |||| | |||||||| |||||          |||||||||| |||| ||||||||||| |||||||    
T  38879725 gtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 38879824  T
Q  364 cactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    |||| ||||||||||||| ||||| || || |||||||||| ||||| ||| |||||||||||||||||  |||||||||||||||||| || |||||||    
T  38879825 cacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacataaaatgagggaccaaatttggaggaatctgaaattatagagaccaaa 38879924  T
Q  464 agtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||| |||||||||||||| ||||||    
T  38879925 agtgggaggaatatgaaattacagggacgtaatt 38879958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 266 - 486
Target Start/End: Original strand, 44816833 - 44817058
Alignment:
Q  266 gtaaatacctcttttt--gtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn---gatttagattatgtctctgtaatttcaaattc 360  Q
    |||||||||||||||   ||||||||||||||||| ||||||| |||||||| ||||           ||||| |||| |||| ||||||||||| ||||    
T  44816833 gtaaatacctcttttctcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaaaagattttgattttgtccctgtaatttcagattc 44816932  T
Q  361 ttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 460  Q
    ||||||| ||||||||||||| ||||| || || |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44816933 ttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggacc 44817032  T
Q  461 aaaagtgggaggaatctgaaattaca 486  Q
    |||||||| |||||| ||||| ||||    
T  44817033 aaaagtggaaggaatttgaaactaca 44817058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 266 - 497
Target Start/End: Original strand, 31851243 - 31851473
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| |||| | |||||||||  ||||||||||||||| |||||         ||||||||| ||||  |||||||||| ||| |||||    
T  31851243 gtaaatacctcttttcgtccttttaatattagtgaatttcgattttagttcctgtaaaaaaaa-atttagattctgtcattgtaatttcatatttttcca 31851341  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || ||| || ||| |||||||| ||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||| |||||||||||||| |||||     
T  31851342 cttttgatctctcttttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagaaatatgaaattacagggatcaaaat 31851441  T
Q  466 tgggaggaatctgaaattacagggatgtaatt 497  Q
    || |||||||||||||||||||||| ||||||    
T  31851442 tgagaggaatctgaaattacagggacgtaatt 31851473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 266 - 459
Target Start/End: Original strand, 25772366 - 25772559
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||  ||||        |||||||||| ||||  |||||||||| |||||||||    
T  25772366 gtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagtttctgtaaaaaaaagatttagattttgtccttgtaatttcatattcttcca 25772465  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    || ||| ||||||||| ||||| || || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  25772466 cttttgttccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggac 25772559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 266 - 501
Target Start/End: Original strand, 28218180 - 28218401
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 363  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||          |||||||||| |||| ||||||||||| |||||||    
T  28218180 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttc 28218279  T
Q  364 cactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    |||| ||||||||||||| ||||| ||||| ||||||||||                ||||||||||||||||||| |||||||||||||||||||||||    
T  28218280 cacttttggtccctcattccaccacgtcagcagaatctgca----------------tgagggaccaaaagtggagtaatctgaaattacagggaccaaa 28218363  T
Q  464 agtgggaggaatctgaaattacagggatgtaattgatg 501  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  28218364 agtgggaggaatctgaaattacagggacgtaattgatg 28218401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 329 - 486
Target Start/End: Original strand, 23383566 - 23383723
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| |||| || |||||||| ||||||||| | || |||||||||| ||||| || || |||||||||| |||||||||||||||||||||||    
T  23383566 gatttagattttgtccctataatttcatattcttccattttttgtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggac 23383665  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattaca 486  Q
    |||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  23383666 caaaagtgaaggaatttgaaattacaaggaccaaaagtgggaggaatctaaaattaca 23383723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 266 - 459
Target Start/End: Original strand, 48648264 - 48648457
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||| ||||||| ||||||||||||| ||| ||||||||||||||||| |||        |||||||||| |||| ||||||||||| ||| || ||    
T  48648264 gtaaatatctcttttcgtccctgtaatatcagcgaatttcgattttagtccatgtaagaaaaagatttagattttgtccctgtaatttcagattttttca 48648363  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
     | ||||||||||||| ||||| || ||||||||||||| ||||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  48648364 tttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaaggagggaccaaaattggaggaatctgaaattacagggac 48648457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 329 - 497
Target Start/End: Original strand, 20963561 - 20963729
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    ||||||||||  ||| ||||||||| | ||||||||||| ||||||||||||| | |||  | || |||||||||| ||||| |||||||||||||||||    
T  20963561 gatttagatttagtccctgtaattttagattcttccacttttggtccctcattccgccacataagcagaatctgcatacatggcacgtaaaatgagggac 20963660  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||| |||| |||||||||| |||||||||||||||||||| |||||||||||||| ||||||    
T  20963661 caaaagtggaagaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacagggacgtaatt 20963729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 266 - 486
Target Start/End: Complemental strand, 33162912 - 33162690
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 363  Q
    ||||||||||||||| ||| ||||||||||||| ||||||  ||||||||| | |          ||||| |||||||||  ||||||||||||||||||    
T  33162912 gtaaatacctcttttcgtctctgtaatattagcgaatttctgttttagtccttataaaaaaaaaagatttggattatgtcattgtaatttcaaattcttc 33162813  T
Q  364 cactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    |||| || |||  ||||||||||| ||||| |||||||||| ||||| ||| ||||||||||||||||||||| || |||||||||||||| ||||||||    
T  33162812 cacttttagtctttcatttcaccacgtcagcagaatctgcatacatggcacataaaatgagggaccaaaagtgaagtaatctgaaattacacggaccaaa 33162713  T
Q  464 agtgggaggaatctgaaattaca 486  Q
    ||||| |||||| ||||||||||    
T  33162712 agtggaaggaatttgaaattaca 33162690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 329 - 490
Target Start/End: Complemental strand, 24195108 - 24194942
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatga----- 423  Q
    |||||||||| ||||  |||||||||| ||||||||||| ||||||||||||| || || || || |||||||||| |||||| |||||||||||         
T  24195108 gatttagattttgtccttgtaatttcatattcttccacttttggtccctcattccatcacgtaagcagaatctgcatacatgatacgtaaaatgaaatga 24195009  T
Q  424 gggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaggga 490  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  24195008 gggaccaaaagtggaggaatctgaaattatagggaccaaaagtgagaggaatctgaaattacaggga 24194942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 267 - 490
Target Start/End: Original strand, 7657972 - 7658196
Alignment:
Q  267 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn---gatttagattatgtctctgtaatttcaaattcttc 363  Q
    |||||||||||||| |||| |||||||||||| ||||||| ||||| |||||||           |||||||||||||||  |||||||||||||||||     
T  7657972 taaatacctcttttcgtccatgtaatattagcgaatttcggttttaatccctgtaaaaaaaaaaagatttagattatgtccatgtaatttcaaattctta 7658071  T
Q  364 cactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    |||| ||||||| || ||||| || ||||| | ||||||||  |||| ||||||||||||||||| |||||| || ||||||||||||| | ||||||||    
T  7658072 cacttttggtccatcctttcatcacgtcagcaaaatctgca-tcatgtcacgtaaaatgagggactaaaagtagatgaatctgaaatta-aaggaccaaa 7658169  T
Q  464 agtgggaggaatctgaaattacaggga 490  Q
    |||||||||||| ||||||||||||||    
T  7658170 agtgggaggaatatgaaattacaggga 7658196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 348 - 497
Target Start/End: Original strand, 1250291 - 1250440
Alignment:
Q  348 taatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctga 447  Q
    |||||| | ||||||||||| |||||| |||||| ||||| |||||  ||||||||| ||||| || ||||||||| |||  |||||||||||||| ||     
T  1250291 taattttagattcttccacttttggtctctcattccaccacgtcagctgaatctgcatacatgtcatgtaaaatgaaggattaaaagtggaggaatatgg 1250390  T
Q  448 aattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||| |||||||| | |||||||| |||||||||||||| ||||||    
T  1250391 aattacagtgaccaaaaataggaggaatttgaaattacagggacgtaatt 1250440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 41600334 - 41600195
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||||||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  41600334 gtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcc 41600235  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| |||||||||| ||||| || ||||| | ||||||||    
T  41600234 acttttggtccctcctttcatcacgtcagcaaaatctgca 41600195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 16995202 - 16995340
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||| ||||||||||||| ||||||| ||||||| |||||         ||||||||| |||| ||||||||||| |||||||||    
T  16995202 gtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaatatttagattttgtccctgtaatttcagattcttcca 16995301  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || |||||||| |||| ||||| ||||| ||||||||||    
T  16995302 cttttggtcccacattccaccacgtcagcagaatctgca 16995340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 418 - 490
Target Start/End: Complemental strand, 6466077 - 6466005
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaggga 490  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||    
T  6466077 aaatgagggaccaaaagtggagtaatatgaaattacagggatcaaaagtgggaggaatttgaaattacaggga 6466005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 23704664 - 23704802
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||||||||||||||||| |||| || ||||| || ||||        |||||| ||| |||| ||||||||||| |||||||||    
T  23704664 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgtaaaaaaaagatttacattttgtccctgtaatttcagattcttcca 23704763  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || |||||||||| ||||| || |||| |||||||||||    
T  23704764 cttttggtccctcctttcatcaagtcaatagaatctgca 23704802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 261 - 404
Target Start/End: Complemental strand, 12006921 - 12006777
Alignment:
Q  261 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaatt 359  Q
    |||| ||||||||||||||| || | |||||||||||| |||| ||||||||||||||||         |||||||||| |||| ||||||||||| |||    
T  12006921 ttagggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagatt 12006822  T
Q  360 cttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||| |||||||||| ||||| || ||||| | ||||||||    
T  12006821 cttccacttttggtccctcctttcatcacgtcagcaaaatctgca 12006777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 384
Target Start/End: Complemental strand, 28218539 - 28218420
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  28218539 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcc 28218440  T
Q  365 actgttggtccctcatttca 384  Q
    ||| |||||||||| |||||    
T  28218439 acttttggtccctcctttca 28218420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 38880097 - 38879961
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| |||||||||||||||||||||| || ||||||||  | |         ||||||||| |||| ||||||||||| |||||||||    
T  38880097 gtaaatacctcttttcgtccctgtaatattagcaaattccggttttagtc--tttaaaaaaaaaatttagattttgtccctgtaatttcagattcttcca 38880000  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || |||||||||| |||||||| ||||  ||||||||||    
T  38879999 cttttggtccctcctttcaccaagtcaacagaatctgca 38879961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 384
Target Start/End: Complemental strand, 48672655 - 48672536
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||| ||||||||||||| ||||||| |||||||||||||         |||||||||| | || ||||||||||| ||||||||    
T  48672655 gtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattcttcc 48672556  T
Q  365 actgttggtccctcatttca 384  Q
    ||| |||||||||| |||||    
T  48672555 acttttggtccctcctttca 48672536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 6465857 - 6465995
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||| || |||| |||| |||||||||||| |||| || |||||||||||||         |||||||||||||   |||||||||| |||||||||    
T  6465857 gtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaatatttagattatgttcttgtaatttcagattcttcca 6465956  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || |||||||||| ||||| || ||||| ||||||||||    
T  6465957 cttttggtccctcctttcatcacgtcagaagaatctgca 6465995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 266 - 384
Target Start/End: Complemental strand, 20419913 - 20419793
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt--nnnnnnnngatttagattatgtctctgtaatttcaaattcttc 363  Q
    ||||||||||||||||||||||||||||||| | |||| || |||||||||||||          |||||||||| |||| ||||||||||| |||||||    
T  20419913 gtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttc 20419814  T
Q  364 cactgttggtccctcatttca 384  Q
     ||| |||||||||| |||||    
T  20419813 tacttttggtccctcctttca 20419793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 266 - 375
Target Start/End: Complemental strand, 20963869 - 20963760
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||||||||||||||||||||| |||| || |||||||||||||         |||||||||  ||| ||||||||||| |||||| ||    
T  20963869 gtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaataaaatttagatttagtccctgtaatttcagattctttca 20963770  T
Q  366 ctgttggtcc 375  Q
    || |||||||    
T  20963769 cttttggtcc 20963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 23383876 - 23383737
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||  ||||  ||||||||||||||          |||||||||| |||| ||||||||||| ||||||||    
T  23383876 gtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 23383777  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||  |||||||||| ||||| || ||||  ||||||||||    
T  23383776 acctttggtccctcctttcatcaagtcaacagaatctgca 23383737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 404
Target Start/End: Complemental strand, 48648604 - 48648466
Alignment:
Q  265 agtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||| |||||| ||||| ||||||||||| |||||||||||||||| || |        |||||||||| ||||| |||||||| | ||||||||    
T  48648604 agtaaatacttcttttcgtcccagtaatattagcgaatttcgattttagtctctat-aaaaaaagatttagattttgtctatgtaattttagattcttcc 48648506  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||  ||||||||| ||||| || ||||  ||||||||||    
T  48648505 acttctggtccctcctttcatcacgtcaacagaatctgca 48648466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 404
Target Start/End: Complemental strand, 1250518 - 1250443
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||||| |||| || |||||||| ||||||||||| |||||||||| ||||| || ||||| ||||||||||    
T  1250518 gatttagattttgtccctttaatttcatattcttccacttttggtccctcctttcatcacgtcagaagaatctgca 1250443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 404
Target Start/End: Complemental strand, 25772712 - 25772568
Alignment:
Q  261 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaatt 359  Q
    |||| ||||||| ||||||| |||||| |||||||||  |||| |  |||||||||||||         |||||||||| |||| ||||||||||| |||    
T  25772712 ttagggtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagatt 25772613  T
Q  360 cttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||| ||| |||||||||| ||||| || ||||  ||||||||||    
T  25772612 cttctacttttggtccctcctttcatcaagtcaacagaatctgca 25772568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 28218297 - 28218257
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  28218297 aatgagggaccaaaagtggaagaatctgaaattacagggac 28218257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 44816953 - 44816913
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  44816953 aatgagggaccaaaagtggaagaatctgaaattacagggac 44816913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 7658341 - 7658287
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||||||||||||| ||||||||||||||| | ||||||| |||||||| ||||    
T  7658341 gtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtctctgt 7658287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 24195248 - 24195198
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 316  Q
    ||||||||||||||| ||||||||||||||||| ||||  |||||||||||    
T  24195248 gtaaatacctcttttcgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 12006803 - 12006840
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  12006803 gagggaccaaaagtggaagaatctgaaattacagggac 12006840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 20459003 - 20458954
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctc 378  Q
    |||||||||| |||| ||||||||||| ||||||||||| ||||||||||    
T  20459003 gatttagattttgtcactgtaatttcagattcttccacttttggtccctc 20458954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 23704776 - 23704739
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  23704776 gagggaccaaaagtggaagaatctgaaattacagggac 23704739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 28218426 - 28218463
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  28218426 gagggaccaaaagtggaagaatctgaaattacagggac 28218463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 38879987 - 38880024
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  38879987 gagggaccaaaagtggaagaatctgaaattacagggac 38880024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 41600221 - 41600258
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  41600221 gagggaccaaaagtggaagaatctgaaattacagggac 41600258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 12006658 - 12006618
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  12006658 aatgagggatcaaaagtggaagaatctgaaattacagggac 12006618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 16995317 - 16995277
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  16995317 aatgtgggaccaaaagtggaagaatctgaaattacagggac 16995277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 20458809 - 20458773
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacag 455  Q
    |||||||||||||||||||| ||||||||||||||||    
T  20458809 aatgagggaccaaaagtggaagaatctgaaattacag 20458773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 20963613 - 20963573
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  20963613 aatgagggaccaaaagtggaagaatctaaaattacagggac 20963573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 23704921 - 23704961
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  23704921 aatgagggaccaaaagtggaagaatatgaaattacagggac 23704961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 38879842 - 38879802
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  38879842 aatgagggaccaaaagtggaagaatatgaaattacagggac 38879802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 458
Target Start/End: Original strand, 48672542 - 48672578
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacaggga 458  Q
    ||||||||||||||||| |||||||||||||||||||    
T  48672542 gagggaccaaaagtggaagaatctgaaattacaggga 48672578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 6466181 - 6466127
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||||| ||||||||||  ||||||||||||| ||||||| |||||||| ||||    
T  6466181 gtaaatatctctttttgtatctgtaatattagcgaatttcggttttagtctctgt 6466127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 315
Target Start/End: Complemental strand, 31852203 - 31852157
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtc 315  Q
    |||||||||||| ||||||||||||||| | ||||||| ||||||||    
T  31852203 aatacctcttttcgtccctgtaatattaacgaatttcggttttagtc 31852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 459
Target Start/End: Complemental strand, 7842546 - 7842517
Alignment:
Q  430 aaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||||||||||||||||    
T  7842546 aaaagtggaggaatctgaaattacagggac 7842517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 20419799 - 20419836
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||| || ||||||||||||||||||||    
T  20419799 gagggaccaaaagtagaagaatctgaaattacagggac 20419836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 455
Target Start/End: Original strand, 20458954 - 20458987
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacag 455  Q
    ||||||||||||||||| ||||||||||||||||    
T  20458954 gagggaccaaaagtggaagaatctgaaattacag 20458987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 24194978 - 24194941
Alignment:
Q  423 agggaccaaaagtg-gaggaatctgaaattacagggac 459  Q
    |||||||||||||| |||||||||||||||||||||||    
T  24194978 agggaccaaaagtgagaggaatctgaaattacagggac 24194941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 25772594 - 25772631
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||| || ||||||||||||||||||||    
T  25772594 gagggaccaaaagtagaagaatctgaaattacagggac 25772631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 454
Target Start/End: Complemental strand, 6465969 - 6465937
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattaca 454  Q
    ||||||||||||||||| |||||||||||||||    
T  6465969 gagggaccaaaagtggaagaatctgaaattaca 6465937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 20419654 - 20419614
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||| |||| |||| |||||||||||||||    
T  20419654 aatgagggaccaaaaatggaagaatatgaaattacagggac 20419614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 20963686 - 20963650
Alignment:
Q  346 tgtaatttcaaattcttccactgttggtccctcattt 382  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  20963686 tgtaatttcatattcttccacttttggtccctcattt 20963650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 24195056 - 24195096
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  24195056 aatgagggaccaaaagtggaagaatatgaaattacaaggac 24195096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 384
Target Start/End: Complemental strand, 31851548 - 31851496
Alignment:
Q  332 ttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttca 384  Q
    ||||||| |||| ||||||||||| ||||||||||| |||||| ||| |||||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtctctcctttca 31851496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 41600076 - 41600036
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||| |||| ||||| ||||||||||||||||||||    
T  41600076 aatgagggatcaaatgtggaagaatctgaaattacagggac 41600036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 44817128 - 44817072
Alignment:
Q  348 taatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||| |||||| |||| |||||||||| ||||| || |||| |||||||||||    
T  44817128 taatttcatattctttcacttttggtccctcttttcatcaagtcaatagaatctgca 44817072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 48672397 - 48672361
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacag 455  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  48672397 aatgagggatcaaaagtggaagaatctgaaattacag 48672361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 1e-73; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 266 - 497
Target Start/End: Complemental strand, 23806328 - 23806096
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  23806328 gtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 23806229  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||||||||||||| ||||| ||||| | ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23806228 acttttggtccctcattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattatagggaccaaaa 23806129  T
Q  465 gtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||||||||| ||||||    
T  23806128 gtgggaggaatctgaaattacagggacgtaatt 23806096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 253 - 501
Target Start/End: Complemental strand, 15106454 - 15106207
Alignment:
Q  253 atttgtttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatt 352  Q
    |||| ||||| | ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||         ||||||||| |||| ||||||||    
T  15106454 attttttttttgggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaa-atttagattttgtccctgtaatt 15106356  T
Q  353 tcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaatta 452  Q
    ||| ||||||||||| ||| ||||||||| ||||| ||||| | |||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  15106355 tcagattcttccacttttgatccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaatta 15106256  T
Q  453 cagggaccaaaagtgggaggaatctgaaattacagggatgtaattgatg 501  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||    
T  15106255 cagggaccaaaagtgggaggaatctgaaattacaaggacttaattgatg 15106207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 266 - 501
Target Start/End: Original strand, 17850589 - 17850824
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||||||||| |        |||||||||| |||||||||||||| | |||||||||    
T  17850589 gtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctataaaaaaaagatttagattttgtctctgtaatttaagattcttcca 17850688  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || ||| ||||||||| ||||| ||||| |||||||||| |||||  || |||||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  17850689 cttttgatccctcattccaccacgtcagcagaatctgcatacatggtacctaaaatgagggatcaaaagtggaggaatctgaaattaaaggaaccaaaag 17850788  T
Q  466 tgggaggaatctgaaattacagggatgtaattgatg 501  Q
    ||||||||||||||||||||| ||| ||||||||||    
T  17850789 tgggaggaatctgaaattacaaggacgtaattgatg 17850824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 258 - 497
Target Start/End: Original strand, 26560550 - 26560788
Alignment:
Q  258 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaa 357  Q
    ||||||| || |||| ||||||| ||||||||||||||| | |||||||||||||||||||||        ||||||||||  ||| ||||||||||| |    
T  26560550 tttttagggttaatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgtaaaaaaa-gatttagatttagtccctgtaatttcaga 26560648  T
Q  358 ttcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggg 457  Q
    |||||||||| ||||||||| ||| ||||| ||||| |||||||||| ||||| |||||||||||||||| ||||||||||||||| |||||||||||||    
T  26560649 ttcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatttgaaattacaggg 26560748  T
Q  458 accaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    | ||||||||||||||||||||||||||||||| ||||||    
T  26560749 atcaaaagtgggaggaatctgaaattacagggacgtaatt 26560788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 266 - 497
Target Start/End: Complemental strand, 17463467 - 17463235
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| | ||||||||||||||| |||| || |||||||||||||         |||||||||| |||| |||||||| || ||||||||    
T  17463467 gtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattcttcc 17463368  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||| ||||||||| |||||||| || |||||||||| ||||| || ||||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  17463367 acttttgatccctcattccaccatgtaagcagaatctgcatacatggcatgtaaaatgagggaccaaaattagaggaatctaaaattacagggaccaaaa 17463268  T
Q  465 gtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||||||||| ||||||    
T  17463267 gtgggaggaatctgaaattacagggacgtaatt 17463235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 258 - 486
Target Start/End: Complemental strand, 19251853 - 19251625
Alignment:
Q  258 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaa 357  Q
    ||||||| ||||||||||||||| |||| |||||||||||  |||| || |||||||||||||        |||||||||| ||||  |||||||||| |    
T  19251853 tttttagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaagatttagattctgtccttgtaatttcata 19251754  T
Q  358 ttcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggg 457  Q
    |||||||||| | ||||||||||||||||| ||||| |||||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||||    
T  19251753 ttcttccactttcggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgatggaccaaaagtggaggaatatgaaattacaggg 19251654  T
Q  458 accaaaagtgggaggaatctgaaattaca 486  Q
    | ||||||| |||||||| ||||||||||    
T  19251653 atcaaaagttggaggaatttgaaattaca 19251625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 329 - 497
Target Start/End: Original strand, 22263257 - 22263425
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| |||| ||||||||||| ||||||||||| ||||||||| ||| ||||| ||||| |||||||||| ||||| |||||||||||||||||    
T  22263257 gatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggac 22263356  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  22263357 caaaagtggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacagggacgtaatt 22263425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 266 - 459
Target Start/End: Complemental strand, 26236470 - 26236277
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||||||||||||||||| ||||||| ||||||||| ||         |||||||||| |||| ||||||||||| |||||||||    
T  26236470 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccttggaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 26236371  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
     | ||||||||||||| ||||| || || |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  26236370 tttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggac 26236277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 345 - 497
Target Start/End: Complemental strand, 39878398 - 39878246
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatc 444  Q
    ||||||||||| ||| || |||| ||||||||||||||||||| | ||| |||||||||| | |||||||||||||||||||||||||||||||| ||||    
T  39878398 ctgtaatttcagattttttcacttttggtccctcatttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatc 39878299  T
Q  445 tgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||| |||||||||||||||||||||| |||||||||||||| ||||||    
T  39878298 tgaaattagagggaccaaaagtgggaggaatatgaaattacagggacgtaatt 39878246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 340 - 497
Target Start/End: Original strand, 13284485 - 13284642
Alignment:
Q  340 tgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggag 439  Q
    |||| ||||||||||| ||||||||||| || |||||||||||||||| | ||  |||||||||| ||||||||||| ||||||||||||||||||| ||    
T  13284485 tgtccctgtaatttcatattcttccacttttagtccctcatttcaccacgacaacagaatctgcatacatgacacgtgaaatgagggaccaaaagtgaag 13284584  T
Q  440 gaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
     ||| ||||||||||||||||||||||||||||||||| |||||||| ||| ||||||    
T  13284585 aaatatgaaattacagggaccaaaagtgggaggaatcttaaattacaaggacgtaatt 13284642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 329 - 484
Target Start/End: Complemental strand, 20499057 - 20498902
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| |||| ||||||||||| |||||| |||| ||||||| |||||||||||  |||| |||||||||| ||||  ||||||||||||||||     
T  20499057 gatttagattttgtccctgtaatttcagattctttcacttttggtccttcatttcaccacatcagcagaatctgcatacatagcacgtaaaatgagggat 20498958  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaatta 484  Q
    |||||||||||  |||||||||||||||||||||||||||||||||| ||||||||    
T  20498957 caaaagtggagtgatctgaaattacagggaccaaaagtgggaggaatatgaaatta 20498902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 346 - 490
Target Start/End: Complemental strand, 33290344 - 33290200
Alignment:
Q  346 tgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatct 445  Q
    |||||||||| ||||||||||| ||||||||| ||||||||| ||||  | |||||||| ||||| | | | ||||||||||||||||||||||| ||||    
T  33290344 tgtaatttcatattcttccacttttggtccctaatttcaccacgtcaaaaaaatctgcatacatggctcatgaaatgagggaccaaaagtggaggtatct 33290245  T
Q  446 gaaattacagggaccaaaagtgggaggaatctgaaattacaggga 490  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  33290244 gaaattacagggaccaaaagggggaggaatctgaaattacaggga 33290200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 332 - 497
Target Start/End: Original strand, 42670788 - 42670953
Alignment:
Q  332 ttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaa 431  Q
    ||||||| ||||  |||||||||| ||||||||||| ||||||||| ||| ||||| ||||| | ||| |||  ||||| ||||||||||||||||||||    
T  42670788 ttagattttgtccttgtaatttcatattcttccacttttggtcccttattccaccacgtcagcaaaatttgcttacatggcacgtaaaatgagggaccaa 42670887  T
Q  432 aagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    || ||||||||| |||||||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  42670888 aaatggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacaggaacgtaatt 42670953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 395 - 497
Target Start/End: Original strand, 23854798 - 23854900
Alignment:
Q  395 agaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgta 494  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  23854798 agaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggatcaaaagtgggaggaatctgaaattacagggacgta 23854897  T
Q  495 att 497  Q
    |||    
T  23854898 att 23854900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 266 - 497
Target Start/End: Complemental strand, 26136193 - 26135961
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 363  Q
    ||||||||||||||| |||| |||||||||| | ||||||| ||||||||| |||          |||||||||| ||||  |||||||||| |||||||    
T  26136193 gtaaatacctcttttcgtccttgtaatattaacgaatttcggttttagtcc-tgtaaaaaaaaaagatttagattttgtcattgtaatttcatattcttc 26136095  T
Q  364 cactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    |||| ||| || ||| || || || || || |||||||||| |||||  ||||||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  26136094 cacttttgatctctcgttccatcacgtaagcagaatctgcatacatggtacgtaaaataagggaccaaaagtggaggaatctaaaattacaaggaccaaa 26135995  T
Q  464 agtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||| |||||||||||||||||| ||| ||||||    
T  26135994 agtgagaggaatctgaaattacaaggacgtaatt 26135961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 268 - 459
Target Start/End: Original strand, 30390463 - 30390655
Alignment:
Q  268 aaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngat-ttagattatgtctctgtaatttcaaattcttccac 366  Q
    ||||| ||||||| |||| |||||||||||| |||| |||||||| |||||||         |  ||||||| |||| ||||||||||| ||||||||||    
T  30390463 aaatatctcttttcgtccatgtaatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattcttccac 30390562  T
Q  367 tgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    | ||||||||||||| ||||| || || | |||||||| ||||  |||||||||||||||||||||| || ||||||||||||||||||||||    
T  30390563 ttttggtccctcattccaccacgtaagcaaaatctgcatacatagcacgtaaaatgagggaccaaaaatgaaggaatctgaaattacagggac 30390655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 384
Target Start/End: Original strand, 19251476 - 19251591
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||||        |||||||||| |||| ||||||||||| |||||||||||     
T  19251476 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttccactt 19251575  T
Q  369 ttggtccctcatttca 384  Q
    |||||||||| |||||    
T  19251576 ttggtccctcctttca 19251591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 42671095 - 42670956
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||||||||||||| ||||||| ||||||  |||||||||||||        | |||||||||||||| ||||||||||| ||| ||||    
T  42671095 gtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatatttttcc 42670996  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| |||||||||| ||||| || ||||| ||||||||||    
T  42670995 acttttggtccctcctttcatcacgtcagcagaatctgca 42670956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 345 - 439
Target Start/End: Complemental strand, 13254732 - 13254638
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggag 439  Q
    ||||||||||| ||||||||||| |||||||||||||||||||  | || |||||| | | ||||||||||||||||||||||||||||||||||    
T  13254732 ctgtaatttcagattcttccacttttggtccctcatttcaccacataagcagaatcagtatacatgacacgtaaaatgagggaccaaaagtggag 13254638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 259 - 404
Target Start/End: Original strand, 20498742 - 20498886
Alignment:
Q  259 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaat 358  Q
    |||||| ||||||||||||||| |||  |||||||||||| |||| || |||||||||||||         |||||||||||||| ||||| ||||| ||    
T  20498742 ttttagggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtccctgtaaaaaaaatatttagattatgtccctgta-tttcagat 20498840  T
Q  359 tcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||||||||| |||||||||| ||| | || ||||||||||||||||    
T  20498841 tcttccacttttggtccctccttttatcacgtcagtagaatctgca 20498886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 17850962 - 17850823
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||         | |||||||| |||| ||||||||||| ||||||||    
T  17850962 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagattcttcc 17850863  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| |||||||||| ||||| || ||||| | ||||||||    
T  17850862 acttttggtccctcttttcatcacgtcagcaaaatctgca 17850823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 404
Target Start/End: Original strand, 26135828 - 26135958
Alignment:
Q  275 tctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttccactgttggt 373  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||||         |||||||||| |||| ||||||||||| ||||||| ||| |||||    
T  26135828 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggt 26135927  T
Q  374 ccctcatttcaccatgtcagtagaatctgca 404  Q
    ||||| ||||| || ||||  ||||||||||    
T  26135928 ccctcctttcatcaagtcaacagaatctgca 26135958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 402
Target Start/End: Original strand, 34548558 - 34548712
Alignment:
Q  248 attatatttgtttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctg 347  Q
    ||||| ||| ||||| | |||||||| |||||| ||||||||||||||||  ||||| | |||||||||||||        |||||||||| ||||  ||    
T  34548558 attatttttcttttttgggtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaagatttagattttgtccatg 34548657  T
Q  348 taatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctg 402  Q
    |||||||| ||| ||||||  |||||| ||| ||||| || ||||||||||||||    
T  34548658 taatttcatattgttccacctttggtcactcctttcatcacgtcagtagaatctg 34548712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 23854693 - 23854797
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttccact 367  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||||         |||||||||| |||| ||||||||||| |||||||||||    
T  23854693 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 23854792  T
Q  368 gttgg 372  Q
     ||||    
T  23854793 tttgg 23854797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 39878105 - 39878243
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaaattcttcc 364  Q
    |||||||||| ||||||||| |||||||||||| |||| || |||||||||||||          ||||||||||||| |||||||||||| ||||||||    
T  39878105 gtaaatacct-tttttgtccttgtaatattagcgaattccggttttagtccctgtaaaaaaagatatttagattatgtatctgtaatttcagattcttcc 39878203  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| |||||| ||| ||||| || ||||| | ||||||||    
T  39878204 acttttggtcactcctttcatcaagtcagcaaaatctgca 39878243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 404
Target Start/End: Complemental strand, 23854977 - 23854903
Alignment:
Q  330 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||||||||| |||||||||||||| | ||||||||||| |||||||||| ||||| || ||||| ||||||||||    
T  23854977 atttagattttgtctctgtaattttatattcttccacttttggtccctcctttcatcacgtcagcagaatctgca 23854903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 22263569 - 22263428
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn---gatttagattatgtctctgtaatttcaaattctt 362  Q
    ||||||||||||||| || |||||||||||||| |||| || |||||||| ||||           |||| ||||| |||| ||||||||||| ||||||    
T  22263569 gtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaaagattcagattttgtccctgtaatttcatattctt 22263470  T
Q  363 ccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||||| |||||||||| ||||| || ||||| | ||||||||    
T  22263469 ccacttttggtccctcctttcatcacgtcagcataatctgca 22263428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 406
Target Start/End: Complemental strand, 12419095 - 12418958
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    |||||| ||||| ||||||||||||||||| |||| || ||||||||||| |          |||||||| ||||  || ||||||  |||| ||||||     
T  12419095 aataccacttttggtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagtttagattctgtccatgaaatttccgattcctccactt 12418996  T
Q  369 ttggtccctcatttcaccatgtcagtagaatctgcaca 406  Q
    || ||||||||||| |||||||||| ||||||||||||    
T  12418995 ttagtccctcatttaaccatgtcagcagaatctgcaca 12418958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 406
Target Start/End: Complemental strand, 12431155 - 12431018
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    |||||| ||||| ||||||||||||||||| |||| || ||||||||||| |          |||||||| ||||  || ||||||  |||| ||||||     
T  12431155 aataccacttttggtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagtttagattctgtccatgaaatttccgattcctccactt 12431056  T
Q  369 ttggtccctcatttcaccatgtcagtagaatctgcaca 406  Q
    || ||||||||||| |||||||||| ||||||||||||    
T  12431055 ttagtccctcatttaaccatgtcagcagaatctgcaca 12431018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 459
Target Start/End: Original strand, 13284667 - 13284708
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  13284667 aaatgagggaccaaaagtggaggaatctgaaattacaaggac 13284708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 406
Target Start/End: Complemental strand, 30960044 - 30959907
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    |||||| ||||| ||||||||||||||||| |||| || ||||||||| |||          ||||||||||||| ||||||||||| |||| ||||||     
T  30960044 aataccacttttggtccctgtaatattagcgaattccggttttagtccatgtaaaaaaaaagtttagattatgtccctgtaatttcatattcctccactt 30959945  T
Q  369 ttggtccctcatttcaccatgtcagtagaatctgcaca 406  Q
    ||  |||||| ||| ||| ||| || ||||||||||||    
T  30959944 ttaatccctcgtttaaccctgttagcagaatctgcaca 30959907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 393
Target Start/End: Original strand, 15106069 - 15106197
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||| ||||||| ||||| ||||||||||| ||||||| ||||| |||||||         |||||||||| |||| ||||||||| | ||| ||||    
T  15106069 gtaaatatctcttttcgtccccgtaatattagcgaatttcggttttaatccctgtaaataaaaagatttagattttgtccctgtaattttagattattcc 15106168  T
Q  365 actgttggtccctcatttcaccatgtcag 393  Q
    ||| |||||||||| ||||| || |||||    
T  15106169 acttttggtccctcctttcatcacgtcag 15106197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 404
Target Start/End: Original strand, 26236124 - 26236268
Alignment:
Q  261 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaatt 359  Q
    |||| ||||||| ||||||| |||| |||||||||||| ||||  | |||||||||||||         |||||| ||| |||| ||||||||||| |||    
T  26236124 ttagggtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgtataaaaaaagatttatattttgtccctgtaatttcagatt 26236223  T
Q  360 cttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| |||| |||||||||| ||||| || ||||| ||||| ||||    
T  26236224 ctttcacttttggtccctcctttcatcacgtcagcagaatttgca 26236268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 317
Target Start/End: Complemental strand, 26560931 - 26560880
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccc 317  Q
    ||||||||||||||| |||| |||||||||||| |||| |||||||||||||    
T  26560931 gtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccc 26560880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 320
Target Start/End: Original strand, 30958689 - 30958740
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    |||||| ||||| ||||||||||||||||| ||||||| |||||||||||||    
T  30958689 aataccacttttggtccctgtaatattagcgaatttcggttttagtccctgt 30958740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 456
Target Start/End: Original strand, 13254695 - 13254733
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagg 456  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  13254695 aaatgagggaccaaaagtggaagaatctgaaattacagg 13254733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 17463094 - 17463232
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    |||||||  |||||| |||||| |||||||||| |||| || |||||||| ||||         | ||||||| |||| |||||||||||  |||| |||    
T  17463094 gtaaatagttcttttcgtccctataatattagcgaattccggttttagtcgctgtaaaaaaaaaaattagattttgtccctgtaatttcaggttctccca 17463193  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || |||||||||||||||| || ||||  ||||||||||    
T  17463194 cttttggtccctcatttcatcaagtcaacagaatctgca 17463232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 17850849 - 17850886
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17850849 gagggaccaaaagtggaagaatctgaaattacagggac 17850886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 13284779 - 13284735
Alignment:
Q  276 ctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||    
T  13284779 cttttggtccctgtaatattagcgaatttcggttttagtccctgt 13284735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 15106327 - 15106367
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  15106327 aatgagggatcaaaagtggaagaatctgaaattacagggac 15106367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 23806212 - 23806252
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  23806212 aatgagggaccaaaagtggaagaatatgaaattacagggac 23806252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 26236355 - 26236395
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  26236355 aatgagggaccaaaaatggaagaatctgaaattacagggac 26236395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 26560668 - 26560632
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| ||||||||||||||||||||    
T  26560668 agggaccaaaagtggaagaatctgaaattacagggac 26560632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 30390577 - 30390537
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  30390577 aatgagggaccaaaagtggaagaatatgaaattacagggac 30390537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 320
Target Start/End: Original strand, 42670722 - 42670773
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    |||||||||||| |||||||||||| |||| |||| || |||||||||||||    
T  42670722 aatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgt 42670773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 384
Target Start/End: Original strand, 13254492 - 13254618
Alignment:
Q  259 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaa 357  Q
    |||||| ||||||||||||||  || |||||||||||||| ||||| | ||||| |||||||         |||||||||| ||||  |||||||||| |    
T  13254492 ttttagggtaaatacctctttccgttcctgtaatattagcgaattttggttttactccctgtaaaataaaagatttagattttgtccttgtaatttcaga 13254591  T
Q  358 ttcttccactgttggtccctcatttca 384  Q
    ||||| |||| ||||| |||| |||||    
T  13254592 ttctttcacttttggttcctcctttca 13254618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 464
Target Start/End: Original strand, 39878361 - 39878407
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||||||||||||||||||| |  ||||||||||||||||||| ||||    
T  39878361 aaatgagggaccaaaagtgaaaaaatctgaaattacagggacgaaaa 39878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 13254811 - 13254758
Alignment:
Q  267 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    |||||| ||||||| ||||||||||||||||| |||| || |||||||| ||||    
T  13254811 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtctctgt 13254758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 459
Target Start/End: Complemental strand, 13284527 - 13284486
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||| ||||||||| |||| |||||||||||||||    
T  13284527 aaatgagggactaaaagtggaagaatatgaaattacagggac 13284486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 459
Target Start/End: Complemental strand, 17463210 - 17463169
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  17463210 aaatgagggaccaaaagtgggagaacctgaaattacagggac 17463169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 19251585 - 19251548
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  19251585 gagggaccaaaagtggaagaatatgaaattacagggac 19251548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 459
Target Start/End: Original strand, 20499004 - 20499045
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||| |||||||||||| | ||||||||||||||||||||    
T  20499004 aaatgaaggaccaaaagtgaaagaatctgaaattacagggac 20499045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 22263383 - 22263346
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcattt 382  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  22263383 ctgtaatttcaaattcctccacttttggtccctcattt 22263346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 22263454 - 22263491
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  22263454 gagggaccaaaagtggaagaatatgaaattacagggac 22263491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 23854858 - 23854821
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcattt 382  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  23854858 ctgtaatttcaaattcctccacttttggtccctcattt 23854821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 303
Target Start/End: Complemental strand, 23855070 - 23855033
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatt 303  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  23855070 gtaaatacctcttttcgtccctgtaatattagcgaatt 23855033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 26135932 - 26135895
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||| || ||||||||||||||||||||    
T  26135932 gagggaccaaaagtagaagaatctgaaattacagggac 26135895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 26236242 - 26236205
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  26236242 gagggaccaaaagtgaaagaatctgaaattacagggac 26236205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 367
Target Start/End: Complemental strand, 44098933 - 44098896
Alignment:
Q  330 atttagattatgtctctgtaatttcaaattcttccact 367  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  44098933 atttagattatgtccctgtaatttcagattcttccact 44098896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 401
Target Start/End: Complemental strand, 13284716 - 13284648
Alignment:
Q  333 tagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatct 401  Q
    |||||| ||||  |||||||||| |||| |||||| |||||||||||||| |||| ||||  |||||||    
T  13284716 tagattttgtccttgtaatttcagattcctccacttttggtccctcatttaaccacgtcaacagaatct 13284648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 22263305 - 22263269
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| |||| |||||||||||||||    
T  22263305 agggaccaaaagtggaagaatatgaaattacagggac 22263269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 26560847 - 26560791
Alignment:
Q  348 taatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||| ||||||||||| |||||| ||| ||||| || ||||| ||||||||||    
T  26560847 taatttcatattcttccacttttggtctctcctttcatcacgtcagcagaatctgca 26560791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 4e-73; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 266 - 501
Target Start/End: Original strand, 43851667 - 43851902
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||        |||||||||| |||| ||||||||||| |||||||||    
T  43851667 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaacaaaagatttagattttgtccctgtaatttcagattcttcca 43851766  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || ||| ||||||||| |||||  |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  43851767 cttttgatccctcattccaccacatcagcagaatctgcatacatgacacgtaaaatgagggatcaaaagtggaggaatatgaaattacagggaccaaaag 43851866  T
Q  466 tgggaggaatctgaaattacagggatgtaattgatg 501  Q
    ||||||||||||||||||||| ||| ||||||||||    
T  43851867 tgggaggaatctgaaattacaaggacgtaattgatg 43851902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 272 - 490
Target Start/End: Original strand, 42112993 - 42113211
Alignment:
Q  272 acctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttg 371  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||||        ||||||||||||||| ||||||||| | |||||| |||| |||    
T  42112993 acctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattatgtccctgtaatttaagattctttcacttttg 42113092  T
Q  372 gtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggag 471  Q
    |||||||||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||    
T  42113093 gtccctcatttcaccacgtcagcagaatctgcatacatgacacataaaatgagggaccaaaagtggagtaatatgaaattatagggaccaaaagtgggag 42113192  T
Q  472 gaatctgaaattacaggga 490  Q
    |||| ||||||||||||||    
T  42113193 gaatatgaaattacaggga 42113211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 269 - 497
Target Start/End: Complemental strand, 10108743 - 10108514
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttccact 367  Q
    |||||||||||| |||||||||||||||||||||| || |||||||||||||         |||||||||| |||| ||||||||||| |||||||||||    
T  10108743 aatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 10108644  T
Q  368 gttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtg 467  Q
     ||||||||| ||| ||||| ||||| |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10108643 tttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaagtg 10108544  T
Q  468 ggaggaatctgaaattacagggatgtaatt 497  Q
    ||| ||||||||||||||| ||| ||||||    
T  10108543 ggacgaatctgaaattacaaggacgtaatt 10108514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 266 - 501
Target Start/End: Complemental strand, 7689899 - 7689663
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||         |||||| ||| |||| ||||||||||| ||||||||    
T  7689899 gtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccgtgtaaaaaaaaagatttaaattttgtccctgtaatttcagattcttcc 7689800  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||| ||||||||| ||||| ||||| |||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  7689799 acttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggactaaaa 7689700  T
Q  465 gtgggaggaatctgaaattacagggatgtaattgatg 501  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  7689699 gtgggaggaatctgaaattacaaggacgtaattgatg 7689663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 266 - 490
Target Start/End: Original strand, 17622892 - 17623114
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| |||| |||||||||||| ||||||  |||||||||||||        |||||||||| ||| |||||||||| | |||||||||    
T  17622892 gtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgtaaaaaaa-gatttagattttgt-tctgtaattttagattcttcca 17622989  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || ||||||||||||| ||||| ||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17622990 cttttggtccctcattccaccacgtcagcagaatctgcgtacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 17623089  T
Q  466 tgggaggaatctgaaattacaggga 490  Q
    |||||||||| ||||||||||||||    
T  17623090 tgggaggaatttgaaattacaggga 17623114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 269 - 497
Target Start/End: Original strand, 21147941 - 21148170
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttccac 366  Q
    |||||||||||||||||||||||||||||| |||| || |||||||||||||          |||||||||| |||| ||||||||||| ||||||||||    
T  21147941 aatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttccac 21148040  T
Q  367 tgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagt 466  Q
    | ||||||||| ||| ||||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||    
T  21148041 ttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattata-ggaccaaaagt 21148139  T
Q  467 gggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||||||| ||||||    
T  21148140 gggaggaatctgaaattacagggacgtaatt 21148170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 275 - 501
Target Start/End: Original strand, 30789519 - 30789745
Alignment:
Q  275 tctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggtc 374  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||||        |||||||||| |||||||||||||||| |||| |||||| ||| ||    
T  30789519 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtctctgtaatttcagattcctccacttttgatc 30789618  T
Q  375 cctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaa 474  Q
    ||||||||||||| || || | |||||||| ||||| ||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  30789619 cctcatttcaccacgttagcaaaatctgcatacatggcacgtaagatgagggatcaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaa 30789718  T
Q  475 tctgaaattacagggatgtaattgatg 501  Q
    | |||||||||| ||| ||||||||||    
T  30789719 tatgaaattacaaggacgtaattgatg 30789745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 329 - 497
Target Start/End: Original strand, 14767573 - 14767741
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| |||| ||||||||||| ||| ||||||| ||||||||| ||| ||||| ||||| |||||||||| | ||||||||||||||||| |||    
T  14767573 gatttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagac 14767672  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14767673 caaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatt 14767741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 329 - 497
Target Start/End: Complemental strand, 22494696 - 22494528
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||| | |||| ||||||||||||||||||||||| ||||||||||||| ||||| || || ||||| |||| |||||||||||||||||||||||    
T  22494696 gatttagaatttgtccctgtaatttcaaattcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatgacacgtaaaatgagggac 22494597  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||| ||||||    
T  22494596 caaaagtggaggaatctgaaattactgggaccaaaagtaggaggaatctaaaattacagggacgtaatt 22494528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 266 - 497
Target Start/End: Complemental strand, 26137060 - 26136829
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||| ||||| ||||||||||||||||  ||||||  |||||||||||           | ||||||| |||| ||||||||||| |||||||||    
T  26137060 gtaaataccacttttcgtccctgtaatattagtgaatttcagttttagtccctagtaaaaaaaaaattagattttgtccctgtaatttcagattcttcca 26136961  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || ||||||||||||| ||||| || || |||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||    
T  26136960 cttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaaatggaggaatctgaaagtacaaggaccaaaag 26136861  T
Q  466 tgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||| |||||||||||||||||| ||||||    
T  26136860 tgggagaaatctgaaattacagggacgtaatt 26136829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 272 - 497
Target Start/End: Complemental strand, 5555239 - 5555013
Alignment:
Q  272 acctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttccactgtt 370  Q
    ||||||||| ||||||||||||||||| ||||||| |||||||| ||||         |||||||||| |||| ||||||||||| ||||||||||| ||    
T  5555239 acctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccactttt 5555140  T
Q  371 ggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtggga 470  Q
    ||||||| ||| ||||||||||| | |||||||| | ||| ||||||||||||||||||||||||| ||||||  ||||||||||||||||||| | |||    
T  5555139 ggtcccttattccaccatgtcagcaaaatctgcataaatggcacgtaaaatgagggaccaaaagtgaaggaattcgaaattacagggaccaaaactagga 5555040  T
Q  471 ggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||| |||||| ||||||    
T  5555039 ggaatctgaaattccagggacgtaatt 5555013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 269 - 497
Target Start/End: Complemental strand, 14820667 - 14820438
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttccact 367  Q
    |||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| |||||||||||    
T  14820667 aatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 14820568  T
Q  368 gttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtg 467  Q
     ||||||||| ||| ||||| ||||| |||||||||| ||||||| |||||||||||||||||||||| ||||||| ||| ||||| |||| ||||| |     
T  14820567 tttggtcccttattccaccacgtcagcagaatctgcatacatgactcgtaaaatgagggaccaaaagtagaggaatttgagattacggggagcaaaacta 14820468  T
Q  468 ggaggaatctgaaattacagggatgtaatt 497  Q
    |||| |||||||||||||||||| ||||||    
T  14820467 ggagaaatctgaaattacagggacgtaatt 14820438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 329 - 497
Target Start/End: Original strand, 26532849 - 26533017
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| |||| ||||||||||||||| ||||||| ||| ||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||||     
T  26532849 gatttagattttgtccctgtaatttcaaatttttccacttttgatccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggat 26532948  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
     ||||||||||||||||||||||| ||| |||||||||| ||||| | |||||||||| ||||||||||    
T  26532949 taaaagtggaggaatctgaaattataggaaccaaaagtgtgaggagtttgaaattacaaggatgtaatt 26533017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 266 - 497
Target Start/End: Complemental strand, 42606129 - 42605897
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||| ||||||||||||||||||||||||| ||||  | ||||||||  |||         |||||||||| |||| | ||||||||||||||||||    
T  42606129 gtaaatatctctttttgtccctgtaatattagcgaattctggttttagtcaatgtaaaaaaaaagatttagattttgtccccgtaatttcaaattcttcc 42606030  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||||||| | ||| ||||| || || ||||| ||||  |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42606029 acttttggtccattattccaccacgtaagcagaatttgcattcatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagcgaccaaaa 42605930  T
Q  465 gtgggaggaatctgaaattacagggatgtaatt 497  Q
    | ||||||||| |||||||||||||| ||||||    
T  42605929 gcgggaggaatttgaaattacagggacgtaatt 42605897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 329 - 497
Target Start/End: Complemental strand, 2583632 - 2583464
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||| ||| |||| || |||||||| ||||||||||| ||||| ||||||| |||||  ||||  ||||||||| ||||| || ||||||||||||||    
T  2583632 gatttaaattttgtccctataatttcagattcttccacttttggttcctcattccaccacatcagccgaatctgcatacatggcatgtaaaatgagggac 2583533  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
     |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  2583532 taaaagtggaggaatttgaaattacagggaccaaaagtaggaggaatctgaaattacagggacgtaatt 2583464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 357 - 497
Target Start/End: Original strand, 43481408 - 43481548
Alignment:
Q  357 attcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagg 456  Q
    ||||||||||| |||||| |||||| ||||| |  |||||||| |||| ||||| ||||||||| |||||| ||||||||||||||||| ||||||||      
T  43481408 attcttccacttttggtctctcattccaccacgcaagtagaatttgcatacatggcacgtaaaacgagggatcaaaagtggaggaatctaaaattacaaa 43481507  T
Q  457 gaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||| ||  ||||||||||||||||||| ||| ||||||    
T  43481508 gaccaagagcaggaggaatctgaaattacaaggacgtaatt 43481548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 10108372 - 10108511
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  10108372 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 10108471  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| |||||||||| ||||| || ||||| ||||||||||    
T  10108472 acttttggtccctcctttcatcacgtcagcagaatctgca 10108511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 14820297 - 14820435
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||||||||||||||||| |||| || ||||||| |||||        |||||||||| |||| ||||||||||| |||||||||    
T  14820297 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 14820396  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || |||||||||| ||||| ||  |||| ||||||||||    
T  14820397 cttttggtccctcctttcatcacatcagcagaatctgca 14820435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 30789883 - 30789744
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| |||||||||||||||| ||||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  30789883 gtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcc 30789784  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| ||||||| || ||||| || ||||| | ||||||||    
T  30789783 acttttggtccatcgtttcatcacgtcagcaaaatctgca 30789744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 404
Target Start/End: Original strand, 5554864 - 5555010
Alignment:
Q  259 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaa 357  Q
    |||||| ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||| ||||| |||| || |||||||| |    
T  5554864 ttttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcata 5554963  T
Q  358 ttcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||||| |||||||||  ||||| || ||||| ||||||||||    
T  5554964 ttcttccacttttggtcccttctttcatcacgtcagcagaatctgca 5555010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 267 - 404
Target Start/End: Complemental strand, 17623261 - 17623124
Alignment:
Q  267 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccac 366  Q
    ||||||||||||||  |||||||||||||||| ||||  | ||||||| |||||        |||||||||| ||||  |||||||||||||||||||||    
T  17623261 taaatacctcttttcatccctgtaatattagccaattctggttttagtgcctgtaaaaaaaagatttagattttgtccttgtaatttcaaattcttccac 17623162  T
Q  367 tgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    | |||||| ||| ||||| || ||||| ||||||||||    
T  17623161 ttttggtcactcctttcatcacgtcagcagaatctgca 17623124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 401
Target Start/End: Complemental strand, 10171525 - 10171383
Alignment:
Q  260 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaat 358  Q
    ||||| ||||||||| ||||| ||||||||||||||||| |||| || |||||||||||||          ||||||||| |||| ||||||||| | ||    
T  10171525 tttagggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagat 10171426  T
Q  359 tcttccactgttggtccctcatttcaccatgtcagtagaatct 401  Q
    |||| |||| ||||||||||||| || |||||||| |||||||    
T  10171425 tctttcacttttggtccctcattccatcatgtcagcagaatct 10171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 266 - 393
Target Start/End: Complemental strand, 42113357 - 42113232
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    |||||||| |||||| ||||||||||||||| | ||||||| ||||||| |||||         | |||||||||||| || ||||||||||||||||||    
T  42113357 gtaaatacatcttttcgtccctgtaatattaacgaatttcggttttagttcctgtaaaaaaa--aattagattatgtccctttaatttcaaattcttcca 42113260  T
Q  366 ctgttggtccctcatttcaccatgtcag 393  Q
    || ||| |||||| ||||| ||||||||    
T  42113259 cttttgatccctcctttcatcatgtcag 42113232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 7689520 - 7689644
Alignment:
Q  260 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaat 358  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||  |||||||| |||         |||||||||| ||||  |||||||||| ||    
T  7689520 tttagggtaaatacctcttttcgtccctgtaatattagcgaatttcggctttagtccttgtaaataaaaagatttagatt-tgtccttgtaatttcagat 7689618  T
Q  359 tcttccactgttggtccctcatttca 384  Q
    ||||||||| |||||||||| |||||    
T  7689619 tcttccacttttggtccctcttttca 7689644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 485
Target Start/End: Original strand, 22848400 - 22848540
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcatttcacc-atgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaat 443  Q
    ||||||||||| |||||| || | |||||||||| ||||||| | ||||  |||||||||| | ||| ||||| |||||||| |  |||| |||||||||    
T  22848400 ctgtaatttcagattctttcatttttggtccctcgtttcacccacgtcaaaagaatctgcataaatggcacgtgaaatgagg-ataaaaaatggaggaat 22848498  T
Q  444 ctgaaattacagggaccaaaagtgggaggaatctgaaattac 485  Q
     ||||||||||| |||||||||||  | |||| |||||||||    
T  22848499 ttgaaattacagagaccaaaagtgaaaagaatatgaaattac 22848540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 2583322 - 2583461
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    |||||||||||||||  | |||||||||||||| ||||||||||||||| | |||         |||||||||| |||| ||||||||||  |||||||     
T  2583322 gtaaatacctcttttcattcctgtaatattagcgaatttcgattttagttcttgtaaaataaaagatttagattttgtccctgtaatttcggattcttct 2583421  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| ||| |||||| ||||| || ||||| ||||||||||    
T  2583422 acttttgatccctcctttcatcacgtcagcagaatctgca 2583461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 21148312 - 21148173
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngat-ttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||| ||||||||||||  |||| || |||||||||||||         |  ||||||| ||||  |||||||||| ||||||||    
T  21148312 gtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgtaaaaaaaaaaaattagattttgtccttgtaatttcatattcttcc 21148213  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| || ||||||| ||||| |||||||| ||||||||||    
T  21148212 acttttagtccctcctttcatcatgtcagcagaatctgca 21148173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 14767880 - 14767826
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||||||||||||| || ||||||||||||| |||||||| |||||||||||||    
T  14767880 gtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgt 14767826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 316
Target Start/End: Original strand, 20875692 - 20875750
Alignment:
Q  258 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 316  Q
    ||||||| || |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  20875692 tttttagggttaatacctcttttggtccctgtaatatgagcaaatttcggttttagtcc 20875750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 26136945 - 26136985
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  26136945 aatgagggaccaaaagtggaagaatctgaaattacagggac 26136985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 18044203 - 18044153
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 316  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||    
T  18044203 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 18044153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 455
Target Start/End: Complemental strand, 30789626 - 30789589
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacag 455  Q
    |||||||||| |||||||||||||||||||||||||||    
T  30789626 aaatgagggatcaaaagtggaggaatctgaaattacag 30789589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 7689783 - 7689823
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  7689783 aatgagggatcaaaagtggaagaatctgaaattacagggac 7689823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 21148051 - 21148015
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| ||||||||||||||||||||    
T  21148051 agggaccaaaagtggaagaatctgaaattacagggac 21148015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 22494644 - 22494684
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  22494644 aatgagggaccaaaagtggaagaatttgaaattacagggac 22494684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 35367406 - 35367466
Alignment:
Q  260 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||| ||||||||||||||| ||||||| ||||||||| |||| || ||||| |||||||    
T  35367406 tttagggtaaatacctcttttggtccctgcaatattagcgaattccggttttaatccctgt 35367466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 42605822 - 42605894
Alignment:
Q  332 ttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||||||| | || ||||||||||| ||||||||||| |||||||||| ||| | || ||||||||||| ||||    
T  42605822 ttagattttatccctgtaatttcatattcttccacttttggtccctcctttaatcacgtcagtagaatatgca 42605894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 43851782 - 43851742
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  43851782 aatgagggatcaaaagtggaagaatctgaaattacagggac 43851742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 374
Target Start/End: Complemental strand, 43481691 - 43481581
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 363  Q
    ||||||| ||||||| ||| ||||||||||||| |||| || |||||||| ||||          |||||| ||| |||| |||||||||||||||||||    
T  43481691 gtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaattttgtccctgtaatttcaaattcttc 43481592  T
Q  364 cactgttggtc 374  Q
    |||| ||||||    
T  43481591 cactcttggtc 43481581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 459
Target Start/End: Original strand, 30789773 - 30789807
Alignment:
Q  425 ggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||| ||||||||||||||||||||    
T  30789773 ggaccaaaagtggaagaatctgaaattacagggac 30789807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 7689638 - 7689601
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  7689638 gagggaccaaaagtggaagaatctgaaattacaaggac 7689601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 10108485 - 10108448
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  10108485 gagggaccaaaagtggaagaatatgaaattacagggac 10108448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 10108556 - 10108593
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcattt 382  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  10108556 ctgtaatttcaaattcctccacttttggtccctcattt 10108593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 14820409 - 14820372
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  14820409 gagggaccaaaagtggaagaatatgaaattacagggac 14820372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 20877118 - 20877069
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccct 318  Q
    |||||||||||| ||||||||||||| ||| |||| || |||||||||||    
T  20877118 aatacctcttttggtccctgtaatatgagcgaattccggttttagtccct 20877069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 459
Target Start/End: Complemental strand, 42113103 - 42113062
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||||| | |||||| |||||||||||||    
T  42113103 aaatgagggaccaaaagtgaaagaatcttaaattacagggac 42113062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 2583580 - 2583620
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||| |||||||||||| ||||||||||||| ||||||    
T  2583580 aatgaggaaccaaaagtggaagaatctgaaattatagggac 2583620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 5555133 - 5555169
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| |||| |||||||||||||||    
T  5555133 agggaccaaaagtggaagaatatgaaattacagggac 5555169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 10108634 - 10108670
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| |||| |||||||||||||||    
T  10108634 agggaccaaaagtggaagaatatgaaattacagggac 10108670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 10171403 - 10171443
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||| | |||||| |||||||||||||    
T  10171403 aatgagggaccaaaagtgaaagaatctaaaattacagggac 10171443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 14767621 - 14767585
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||  |||||||||||||||||||    
T  14767621 agggaccaaaagtggaaaaatctgaaattacagggac 14767585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 14820558 - 14820594
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| |||| |||||||||||||||    
T  14820558 agggaccaaaagtggaagaatatgaaattacagggac 14820594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 17623005 - 17622969
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacag 455  Q
    |||||||||||||||||||| |||||| |||||||||    
T  17623005 aatgagggaccaaaagtggaagaatctaaaattacag 17622969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 458
Target Start/End: Complemental strand, 42605868 - 42605832
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacaggga 458  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  42605868 gagggaccaaaagtggaagaatatgaaattacaggga 42605832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 140; Significance: 4e-73; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 253 - 487
Target Start/End: Complemental strand, 16722380 - 16722145
Alignment:
Q  253 atttgtttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaat 351  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||         |||||||||| |||| |||||||    
T  16722380 atttttttttagggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaat 16722281  T
Q  352 ttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaatt 451  Q
    |||| ||||||||||| ||||||||| ||| |||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16722280 ttcatattcttccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaatt 16722181  T
Q  452 acagggaccaaaagtgggaggaatctgaaattacag 487  Q
    |||||||||| |||||||||||||||||||||||||    
T  16722180 acagggaccagaagtgggaggaatctgaaattacag 16722145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 269 - 497
Target Start/End: Original strand, 30500048 - 30500275
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    ||||||||||||  |||||||||||||||| ||||||| |||||||||||||         ||||||||| |||| ||||||||||| |||||||||||     
T  30500048 aatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa-atttagattttgtccctgtaatttcatattcttccactt 30500146  T
Q  369 ttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgg 468  Q
    ||||||||| ||| ||||| ||||| |||||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  30500147 ttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtgaaggaatttgaaattacatggaccaaaagtgg 30500246  T
Q  469 gaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||||||||||||    
T  30500247 gaggaatctgaaattacagggatgtaatt 30500275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 266 - 501
Target Start/End: Original strand, 14171589 - 14171824
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||| ||||| ||||||||||||||||| |||| |||||||| |  ||||        |||||||||| |||| |||||||||||||||||||||    
T  14171589 gtaaataccacttttcgtccctgtaatattagcgaattccgattttaatttctgtaaaaaaaagatttagattttgtccctgtaatttcaaattcttcca 14171688  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || ||| ||||||||| ||||| ||||| |||||||||| ||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  14171689 cttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaaatggaggaatctgaaattacagggaccaaaag 14171788  T
Q  466 tgggaggaatctgaaattacagggatgtaattgatg 501  Q
    ||||||||||||||||||||| ||  ||||||||||    
T  14171789 tgggaggaatctgaaattacaaggtcgtaattgatg 14171824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 259 - 498
Target Start/End: Complemental strand, 43572773 - 43572534
Alignment:
Q  259 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaat 358  Q
    |||||| |||||||||||||||  |||||||||||||  |||||| || ||||||| |||||         ||||||||| |||| ||||||||||| ||    
T  43572773 ttttagggtaaatacctcttttcatccctgtaatattgacaaattccggttttagttcctgtaaaaaaaaaatttagattctgtccctgtaatttcagat 43572674  T
Q  359 tcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 458  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||  | |||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  43572673 tcttccacttttggtccctcatttcaccacgtcagcagaatctgcgtaaatgacacgtaaaatgagggaccaaaagtggagtaatttgaaattacaggga 43572574  T
Q  459 ccaaaagtgggaggaatctgaaattacagggatgtaattg 498  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  43572573 ccaaaagtgggaggaatatgaaattacagggacgtaattg 43572534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 266 - 497
Target Start/End: Original strand, 4204711 - 4204942
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||| ||||||||| |||||||||||||||   ||||||  ||||||| |||||        ||||||||||||||| ||||||||||| |||||||||    
T  4204711 gtaaagacctcttttcgtccctgtaatattaatgaatttcagttttagttcctgtaaaaaaaagatttagattatgtccctgtaatttcagattcttcca 4204810  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || ||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||||||| |||||| ||    
T  4204811 cttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatatgaaattacagagaccaatag 4204910  T
Q  466 tgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||||||| | ||||||||||    
T  4204911 tgggaggaatctgaaattatatggatgtaatt 4204942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 259 - 497
Target Start/End: Complemental strand, 21633279 - 21633040
Alignment:
Q  259 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaa 357  Q
    |||||| |||||||||| || | ||||||||||||||||| ||||||  ||||||||||| |         |||||||||| |||| ||||||||||| |    
T  21633279 ttttagggtaaatacctattctcgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcaga 21633180  T
Q  358 ttcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggg 457  Q
    |||||||||| ||||||||||||| ||||| || || |||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| ||    
T  21633179 ttcttccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaaaagtggaggaatctgaaattacaagg 21633080  T
Q  458 accaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  21633079 accaaaagtgggaggaatctgaaattacagggacgtaatt 21633040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 266 - 497
Target Start/End: Complemental strand, 45970292 - 45970059
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 363  Q
    ||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||          |||||| ||| |||| ||||||||||| |||||||    
T  45970292 gtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagattcttc 45970193  T
Q  364 cactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    |||| ||||| || |||| ||||| || || |||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45970192 cacttttggttccccattccaccacgtaagcagaatccgcatacatgacacgtaaaatgagggaccaaaagtggagaaatctgaaattacagggaccaaa 45970093  T
Q  464 agtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||||||||||||||| ||||||    
T  45970092 agtgggaggaatctgaaattacagggacgtaatt 45970059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 269 - 497
Target Start/End: Complemental strand, 14162243 - 14162015
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    |||||||||||||||||||||||||||||| |||| || |||||||||||||        |||||||||| ||||  |||||||||| |||||||||||     
T  14162243 aatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaagagatttagattttgtccttgtaatttcagattcttccactt 14162144  T
Q  369 ttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgg 468  Q
    ||||||||| ||| ||||| ||||| | ||| |||| ||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||| | |    
T  14162143 ttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaaatggaggaatttgaaattacagggaccaaaattag 14162044  T
Q  469 gaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||||| ||||||    
T  14162043 gaggaatctgaaattacagggacgtaatt 14162015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 266 - 497
Target Start/End: Complemental strand, 49986904 - 49986672
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnnga--tttagattatgtctctgtaatttcaaattcttc 363  Q
    ||||||||||||||| ||||| ||||||||||| ||||||| ||||||| |||||        ||  |||||||| ||||| |||||||||| |||||||    
T  49986904 gtaaatacctcttttcgtcccagtaatattagcgaatttcggttttagttcctgtaaaaaaaagaaatttagattttgtct-tgtaatttcatattcttc 49986806  T
Q  364 cactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    |||| ||||||||||||| ||||| || || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49986805 cacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 49986706  T
Q  464 agtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||| |||||||||||||||||| ||| ||||||    
T  49986705 agtgagaggaatctgaaattacaaggacgtaatt 49986672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 266 - 486
Target Start/End: Original strand, 9266977 - 9267198
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  9266977 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 9267076  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||||||||||||| || || || || |||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9267077 acttttggtccctcattccagcacgtaagcagaatctgcatacattgtacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaa 9267176  T
Q  465 gtgggaggaatctgaaattaca 486  Q
    ||||||||||||||||||||||    
T  9267177 gtgggaggaatctgaaattaca 9267198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 266 - 487
Target Start/End: Original strand, 20853697 - 20853920
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 363  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||  ||||||          |||||||||| |||| || |||||||| |||||||    
T  20853697 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttaaaccctgtaaaaaaaaaagatttagattttgtccctataatttcatattcttc 20853796  T
Q  364 cactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    |||| ||||||||||||| ||||| || ||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||| |    
T  20853797 cacttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctaaaattacagagaccaga 20853896  T
Q  464 agtgggaggaatctgaaattacag 487  Q
    ||||||||||||||||||||||||    
T  20853897 agtgggaggaatctgaaattacag 20853920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 266 - 497
Target Start/End: Original strand, 19112766 - 19112999
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 363  Q
    ||||||||||||||| |||| |||||||||||| |||| || |||||||||||||          |||||||||| |||| ||| ||||||| |||||||    
T  19112766 gtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattcttc 19112865  T
Q  364 cactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    |||| ||||||||| ||| ||||| || || |||||||||| |||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19112866 cacttttggtcccttattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggagaaatctgaaattacagggaccaaa 19112965  T
Q  464 agtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||||||||||| ||| ||||||    
T  19112966 agtgggaggaatctgaaattacaaggacgtaatt 19112999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 255 - 497
Target Start/End: Original strand, 52552681 - 52552922
Alignment:
Q  255 ttgtttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn---gatttagattatgtctctgtaat 351  Q
    |||||||||  || |||| ||||||| |||||| ||||||||||||||||||||||||||| ||||           |||||||||| |||| |||||||    
T  52552681 ttgtttttaaggttaatatctcttttcgtccctctaatattagcaaatttcgattttagtctctgtaaaaaaaaatagatttagattttgtccctgtaat 52552780  T
Q  352 ttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaatt 451  Q
    |||| ||||||||||| ||| ||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||    
T  52552781 ttcagattcttccacttttgatcccttattccaccatgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtgaaggaatttgaaatt 52552880  T
Q  452 acagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||    |||||||||||||||||||||||| ||||||    
T  52552881 acagggaccaa----gggaggaatctgaaattacagggacgtaatt 52552922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 329 - 497
Target Start/End: Complemental strand, 15328772 - 15328604
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| |||| ||||||||||| ||| ||||||| ||||||||| ||| ||||| ||||| |||||||||| | ||||||||||||||||| |||    
T  15328772 gatttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagac 15328673  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15328672 caaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaatt 15328604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 266 - 501
Target Start/End: Complemental strand, 33372780 - 33372546
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||||         |||||||||| |||| ||||||||||| ||||||||    
T  33372780 gtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagttcctgttaaaaaaaagatttagattttgtccctgtaatttcagattcttcc 33372681  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||| |||| |||| ||||| ||||| |||||||||| || ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||    
T  33372680 acttttgatccc-cattccaccacgtcagcagaatctgcatac-tgacacgtaaaatgagggatcaaaagtggaggaatatgaaattacagagaccaaaa 33372583  T
Q  465 gtgggaggaatctgaaattacagggatgtaattgatg 501  Q
    |||||||||||||||||||||| |||  |||||||||    
T  33372582 gtgggaggaatctgaaattacaaggacttaattgatg 33372546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 258 - 477
Target Start/End: Original strand, 35995672 - 35995892
Alignment:
Q  258 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngattt-agattatgtctctgtaatttcaa 356  Q
    ||||||| ||||||||||||||| || |||||||||||||| |||| || |||||||||||||          ||| ||||| |||| |||||||||||     
T  35995672 tttttagggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcag 35995771  T
Q  357 attcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagg 456  Q
    ||||||||||| ||||||||||||| ||||| || || |||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  35995772 attcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaacatgaaattacagg 35995871  T
Q  457 gaccaaaagtgggaggaatct 477  Q
    ||| |||||||||||||||||    
T  35995872 gacaaaaagtgggaggaatct 35995892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 261 - 497
Target Start/End: Complemental strand, 45003876 - 45003640
Alignment:
Q  261 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattc 360  Q
    |||| |||||||  || ||| ||||||||||||||||| ||||||| ||||||| |||||        ||||||||||  ||| || |||||||| ||||    
T  45003876 ttagggtaaatatatcgtttcgtccctgtaatattagcgaatttcggttttagttcctgtaaaaaaaagatttagatttagtccctataatttcatattc 45003777  T
Q  361 ttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacc 460  Q
    ||||||| ||||||||||||| ||||| || || |||||||||| ||||| || ||||||||||||| ||||||||||||||| |||||||||||||| |    
T  45003776 ttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatatgaaattacagggaac 45003677  T
Q  461 aaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  45003676 aaaagtgggaggaatctgaaattacaaggacgtaatt 45003640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 269 - 497
Target Start/End: Original strand, 14262041 - 14262270
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaaattcttccact 367  Q
    |||| ||||||| ||||||||||||||||| |||| || ||||||||| |||          ||||||||| |||| ||||||||||| |||||||||||    
T  14262041 aatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagattcttccact 14262140  T
Q  368 gttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtg 467  Q
     ||||||||| ||| |||||  |||| |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  14262141 tttggtcccttattccaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggatcaaaagtg 14262240  T
Q  468 ggaggaatctgaaattacagggatgtaatt 497  Q
    | |||||||| |||||||||||| ||||||    
T  14262241 gaaggaatctaaaattacagggacgtaatt 14262270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 259 - 497
Target Start/End: Original strand, 17465362 - 17465601
Alignment:
Q  259 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctc-tgtaatttcaa 356  Q
    |||||| |||||||||||||||||||| | |||||||||| ||||  ||||||||| |||||         ||||||||||  ||||| ||||||||||     
T  17465362 ttttagggtaaatacctctttttgtccttttaatattagcgaattctgattttagtacctgtaaaaaaaatgatttagatttcgtctcctgtaatttcag 17465461  T
Q  357 attcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagg 456  Q
    ||||||||| | ||| || |||||| ||||| || || |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| |    
T  17465462 attcttccatttttgatctctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattaca-g 17465560  T
Q  457 gaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  17465561 gaccaaaagtgggaggaatctgaaattacagagacgtaatt 17465601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 330 - 495
Target Start/End: Complemental strand, 38283861 - 38283696
Alignment:
Q  330 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggacc 429  Q
    ||||||||| |||| || |||||||| ||||||||||| ||| ||||| |||||| || ||||| |||||||||| ||||| ||||||||||||||||||    
T  38283861 atttagattttgtccctataatttcagattcttccacttttgatcccttatttcatcacgtcagcagaatctgcatacatggcacgtaaaatgagggacc 38283762  T
Q  430 aaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaa 495  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||| |||||||||||| ||||    
T  38283761 aaaagtggaggaatttgaaattacacggacaaaaagtgggaggaatcttaaattacagggacgtaa 38283696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 269 - 497
Target Start/End: Complemental strand, 5800977 - 5800749
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttccact 367  Q
    |||||||||||| ||||||||||||||||| |||| || ||| |||||||||         |||||||||| ||||  |||||||||| |||||||||||    
T  5800977 aatacctcttttcgtccctgtaatattagcgaattccggttt-agtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccact 5800879  T
Q  368 gttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtg 467  Q
     ||||||||| ||| |||||  |||| | ||| |||| ||||| || ||||||||||||||||||| ||||||||| |||||||||||||||||||| |     
T  5800878 tttggtcccttattccaccacttcagcaaaatttgcatacatggcatgtaaaatgagggaccaaaaatggaggaatttgaaattacagggaccaaaacta 5800779  T
Q  468 ggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||||||||||| ||||||    
T  5800778 ggaggaatctgaaattacagggacgtaatt 5800749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 329 - 497
Target Start/End: Original strand, 47575339 - 47575506
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| ||| | |||||||| | |||||| |||| ||||||||| ||| ||||| | ||| |||||||||| ||||| ||||||||||||||||     
T  47575339 gatttagattttgtttatgtaattttatattctttcacttttggtccct-attccaccacggcagcagaatctgcatacatggcacgtaaaatgagggat 47575437  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||| |||||    
T  47575438 caaaagtggaggaatttgaaattacagggacaaaaaatgggaggaatttgaaattacagggatataatt 47575506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 430 - 501
Target Start/End: Complemental strand, 11003943 - 11003872
Alignment:
Q  430 aaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaattgatg 501  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11003943 aaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaattgatg 11003872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 5800607 - 5800746
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||        | |||||||||||||| ||||||||||| ||||||||    
T  5800607 gtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattcttcc 5800706  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    | | |||||||||| ||||| || ||||| ||||||||||    
T  5800707 atttttggtccctcctttcatcacgtcagcagaatctgca 5800746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 404
Target Start/End: Complemental strand, 14171970 - 14171823
Alignment:
Q  258 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaa 356  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||      
T  14171970 tttttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctg 14171871  T
Q  357 attcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||||||||||| ||||||| || ||||| || ||||| | ||||||||    
T  14171870 attcttccacttttggtccttcctttcatcacgtcagcaaaatctgca 14171823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 14262412 - 14262273
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||| ||||    
T  14262412 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattgttcc 14262313  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| || ||||||| ||||| || ||||| ||||||||||    
T  14262312 acttttagtccctcctttcatcacgtcagcagaatctgca 14262273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 258 - 404
Target Start/End: Complemental strand, 9267358 - 9267212
Alignment:
Q  258 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaa 357  Q
    ||||||| ||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||          |||||||| |||| ||||||| ||| |    
T  9267358 tttttagggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtatataaattttttagattttgtccctgtaatatcaga 9267259  T
Q  358 ttcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||| ||| |||||||||| ||||| || ||||  ||||||||||    
T  9267258 ttcttctacttttggtccctcctttcatcaagtcaacagaatctgca 9267212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 406
Target Start/End: Original strand, 43572385 - 43572535
Alignment:
Q  260 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnnga-tttagattatgtctctgtaatttcaaat 358  Q
    ||||| |||||||| |||||| || |||||||||||||| ||||||| |||||||||||||         | |||||||| |||| ||||||||||| ||    
T  43572385 tttagggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagat 43572484  T
Q  359 tcttccactgttggtccctcatttcaccat---gtcagtagaatctgcaca 406  Q
    ||||||||| |||||||||| ||||| |||   ||||| ||||||||||||    
T  43572485 tcttccacttttggtccctcctttcatcatcaagtcagcagaatctgcaca 43572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 404
Target Start/End: Original strand, 14161937 - 14162012
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||||||||||||||| ||||||||||| ||||||||||| |||||||||| ||||| || ||||| ||||||||||    
T  14161937 gatttagattatgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgca 14162012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 393
Target Start/End: Complemental strand, 30500416 - 30500289
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||||||||||||||||| |||| |  |||||||||||||         ||||||||| |||| ||||||||||| ||| |||||    
T  30500416 gtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaatttagattttgtccctgtaatttcatattgttcca 30500317  T
Q  366 ctgttggtccctcatttcaccatgtcag 393  Q
    || |||||||||| ||||| || |||||    
T  30500316 cttttggtccctcctttcatcacgtcag 30500289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 404
Target Start/End: Complemental strand, 52553000 - 52552925
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||||| |||||||||||||||| ||||||||||| |||||||||| ||||| || ||||| ||||||||||    
T  52553000 gatttagattttgtctctgtaatttcatattcttccacttttggtccctcctttcatcacgtcagcagaatctgca 52552925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 250 - 384
Target Start/End: Complemental strand, 20854086 - 20853953
Alignment:
Q  250 tatatttgtttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgt 348  Q
    |||||||||||| || ||||||| ||||||| |||| |||||||||||| ||||||| ||||||||| |||         |||||||||| |||| ||||    
T  20854086 tatatttgtttt-agggtaaatatctcttttcgtccatgtaatattagcgaatttcggttttagtcc-tgtaaaaaaaaagatttagattttgtccctgt 20853989  T
Q  349 aatttcaaattcttccactgttggtccctcatttca 384  Q
    ||||||| ||||||||||| |||||||||| |||||    
T  20853988 aatttcagattcttccacttttggtccctcctttca 20853953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 404
Target Start/End: Original strand, 33372400 - 33372547
Alignment:
Q  258 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaa 356  Q
    ||||||| ||||||| ||||||| ||||||||||||||||| ||||  | ||||||| |||||         |||||||||| |||| |||||||||||     
T  33372400 tttttagggtaaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgtaaataaaaagatttagattttgtccctgtaatttcag 33372499  T
Q  357 attcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| ||||||| |||||||||| ||||| || ||||| | ||||||||    
T  33372500 attattccacttttggtccctcctttcatcacgtcagcaaaatctgca 33372547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 45969917 - 45970056
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||  |||| || |||||||||||||         |||||||||| |||| ||||||||||| |||||| |    
T  45969917 gtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctttc 45970016  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| |||||| ||| ||||| || ||||  ||||||||||    
T  45970017 acttttggtctctcctttcatcaagtcaacagaatctgca 45970056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 35996051 - 35995915
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    |||||||| |||||| ||||||||||||||||| |||| ||||||||||||||||         | ||||| | |||||| ||||||||| |||||||||    
T  35996051 gtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaa--aattagaatttgtctcagtaatttcagattcttcca 35995954  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || |||||||||  ||||| || ||| | ||||||||||    
T  35995953 cttttggtcccttctttcatcacgtccgcagaatctgca 35995915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 16721993 - 16722132
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||| ||||          ||||||||| ||||  |||||||||| ||||||||    
T  16721993 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagattcttcc 16722092  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| |||||||||  ||||| || ||||  ||||||||||    
T  16722093 acttttggtcccttctttcatcaagtcaacagaatctgca 16722132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 19113141 - 19113002
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| |||||| |||||||| | |||| || |||||||||||||         |||||||||| | || ||||||||||| |||||||     
T  19113141 gtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattcttct 19113042  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| |||||||||| ||||| || ||||  ||||||||||    
T  19113041 acttttggtccctcctttcatcaagtcaacagaatctgca 19113002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 320
Target Start/End: Original strand, 27946114 - 27946165
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt 27946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 15328465 - 15328519
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||||||||||||| || ||||||||||||| |||||||| |||||||||||||    
T  15328465 gtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgt 15328519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 459
Target Start/End: Complemental strand, 4204827 - 4204786
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  4204827 aaatgagggaccaaaagtggaagaatctgaaattacagggac 4204786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 459
Target Start/End: Original strand, 43572650 - 43572691
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  43572650 aaatgagggaccaaaagtggaagaatctgaaattacagggac 43572691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 402
Target Start/End: Original strand, 45003498 - 45003635
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||| ||||||| ||||| |||||||||||||||| || ||| ||||||| |         |||||||||| |||| ||||||||||| ||||||||    
T  45003498 gtaaatatctcttttcgtccccgtaatattagcaaattccggtttcagtccctataaaataaaagatttagattttgtccctgtaatttcagattcttcc 45003597  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctg 402  Q
    ||| || ||||||| ||||| || ||||  ||||||||    
T  45003598 actttttgtccctcctttcatcacgtcaacagaatctg 45003635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 21633156 - 21633196
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  21633156 aatgagggaccaaaagtggaagaatctgaaattacagggac 21633196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 35995796 - 35995756
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  35995796 aatgagggaccaaaagtggaagaatctgaaattacagggac 35995756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 384
Target Start/End: Original strand, 11003734 - 11003853
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    |||||||||||||||||||| |||||||||| | |||| || |||||||||||||         || ||||||| ||||  |||||||||| ||||||||    
T  11003734 gtaaatacctctttttgtccttgtaatattaccgaattccggttttagtccctgtaaataaaaagacttagattttgtccttgtaatttcagattcttcc 11003833  T
Q  365 actgttggtccctcatttca 384  Q
    ||| ||||||| || |||||    
T  11003834 acttttggtccatcctttca 11003853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 406
Target Start/End: Complemental strand, 32998444 - 32998369
Alignment:
Q  331 tttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcaca 406  Q
    |||||||| |||| ||||||||||| |||| |||||| || ||||||| ||| |||||||||| ||||| ||||||    
T  32998444 tttagattctgtccctgtaatttcagattcctccacttttagtccctcgtttaaccatgtcagcagaatttgcaca 32998369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 276 - 379
Target Start/End: Complemental strand, 36991025 - 36990922
Alignment:
Q  276 ctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggtcc 375  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||          |||||||| |||| ||||||||| | ||||||||||| || ||||    
T  36991025 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagtttagattctgtccctgtaattttagattcttccacttttagtcc 36990926  T
Q  376 ctca 379  Q
    ||||    
T  36990925 ctca 36990922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 276 - 379
Target Start/End: Complemental strand, 37016465 - 37016362
Alignment:
Q  276 ctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggtcc 375  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||          |||||||| |||| ||||||||| | ||||||||||| || ||||    
T  37016465 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagtttagattctgtccctgtaattttagattcttccacttttagtcc 37016366  T
Q  376 ctca 379  Q
    ||||    
T  37016365 ctca 37016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 49986523 - 49986649
Alignment:
Q  260 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt--nnnnnnnngatttagattatgtctctgtaatttcaaa 357  Q
    ||||| ||||||||||||||| ||||||||||||||||  |||| || |||||||| ||||          |||||||||| |||| ||||||||||| |    
T  49986523 tttagggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcaga 49986622  T
Q  358 ttcttccactgttggtccctcatttca 384  Q
    |||||| ||| |||||| ||| |||||    
T  49986623 ttcttctacttttggtctctcctttca 49986649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 19720335 - 19720389
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||||| ||||||| ||||||||||||||||| |||| || |||||||||||||    
T  19720335 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 19720389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 27946241 - 27946187
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||||||||||||| ||||| ||||||||||| |||| || |||||||||||||    
T  27946241 gtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccctgt 27946187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 20853959 - 20853996
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  20853959 gagggaccaaaagtggaagaatctgaaattacagggac 20853996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 32998397 - 32998434
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  32998397 gagggactaaaagtggaggaatctgaaattacagggac 32998434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 43572504 - 43572467
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43572504 gagggaccaaaagtggaagaatctgaaattacagggac 43572467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 45058803 - 45058742
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgt 390  Q
    |||||||||| |||||||||||||||| ||||||||| | ||| ||||| ||| ||||||||    
T  45058803 gatttagattttgtctctgtaatttcagattcttccatttttgatcccttattccaccatgt 45058742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 9267093 - 9267053
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  9267093 aatgagggaccaaaagtggaagaatatgaaattacagggac 9267053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 14262150 - 14262114
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| ||||||||||||||||||||    
T  14262150 agggaccaaaagtggaagaatctgaaattacagggac 14262114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 47575581 - 47575509
Alignment:
Q  332 ttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||||||| |||||||||||||||| ||| ||| ||| |||||| ||| ||||| || ||||| ||||||||||    
T  47575581 ttagattttgtctctgtaatttcagatttttcaacttttggtctctcctttcatcacgtcagcagaatctgca 47575509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 21632903 - 21633037
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| |||     |||||||||||||         ||| |||||  |||| ||||||||||| |||||| |    
T  21632903 gtaaatacctcttttcgtccctgtaatattagcgaat-----ttttagtccctgtaaaaaaaaagatctagatgttgtccctgtaatttcagattctttc 21632997  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| |||||||||| ||||| || ||||  ||||||||||    
T  21632998 acttttggtccctcctttcatcaagtcaacagaatctgca 21633037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 379
Target Start/End: Original strand, 35740829 - 35740931
Alignment:
Q  276 ctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggtcc 375  Q
    ||||| ||||||||||||||||| |||| || |||||||||| ||        | |||||||| |||| ||||||||| ||||||||||||| || ||||    
T  35740829 cttttggtccctgtaatattagcgaattccggttttagtccccgtaaaaaaaag-tttagattttgtccctgtaattttaaattcttccacttttagtcc 35740927  T
Q  376 ctca 379  Q
    ||||    
T  35740928 ctca 35740931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 14161986 - 14161949
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  14161986 gagggaccaaaagtggaagaatatgaaattacagggac 14161949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 14262228 - 14262191
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcattt 382  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  14262228 ctgtaatttcaaattcctccacttttggtccctcattt 14262191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 21633011 - 21632974
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  21633011 gagggaccaaaagtgaaagaatctgaaattacagggac 21632974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 33372521 - 33372484
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||  |||||||||||||||||||    
T  33372521 gagggaccaaaagtggaataatctgaaattacagggac 33372484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 45003611 - 45003574
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  45003611 gagggacaaaaagtggaagaatctgaaattacagggac 45003574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 3426021 - 3425973
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccc 317  Q
    |||||||||||| | ||||||||||||||| |||| || ||||||||||    
T  3426021 aatacctcttttggcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 14162135 - 14162171
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  14162135 agggaccaaaagtggaagaatctgaaattacaaggac 14162171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 14171704 - 14171664
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||| |||||||||| |||| |||||||||||||||    
T  14171704 aatgagggatcaaaagtggaagaatttgaaattacagggac 14171664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 15328724 - 15328760
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||  |||||||||||||||||||    
T  15328724 agggaccaaaagtggaaaaatctgaaattacagggac 15328760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 16722105 - 16722069
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  16722105 agggaccaaaagtggaagaatctgaaattacatggac 16722069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 490
Target Start/End: Complemental strand, 16722209 - 16722174
Alignment:
Q  454 agggaccaaaagtgggaggaatctgaaattacaggga 490  Q
    ||||||||||||||| |||||||||||||||||||||    
T  16722209 agggaccaaaagtgg-aggaatctgaaattacaggga 16722174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 16722255 - 16722291
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| |||| |||||||||||||||    
T  16722255 agggaccaaaagtggaagaatatgaaattacagggac 16722291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 458
Target Start/End: Original strand, 19113028 - 19113064
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacaggga 458  Q
    |||||||||||||| || |||||||||||||||||||    
T  19113028 gagggaccaaaagtagaagaatctgaaattacaggga 19113064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 20853814 - 20853774
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||| ||||||    
T  20853814 aatgagggaccaaaagtggaagaatatgaaattatagggac 20853774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 30500155 - 30500119
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| |||| |||||||||||||||    
T  30500155 agggaccaaaagtggaagaatatgaaattacagggac 30500119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 38283737 - 38283773
Alignment:
Q  346 tgtaatttcaaattcttccactgttggtccctcattt 382  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  38283737 tgtaatttcaaattcctccacttttggtccctcattt 38283773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 45003756 - 45003796
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||| ||||||    
T  45003756 aatgagggaccaaaagtggaagaatatgaaattatagggac 45003796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 459
Target Start/End: Original strand, 45970183 - 45970215
Alignment:
Q  427 accaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||| ||||||||||||||||||||    
T  45970183 accaaaagtggaagaatctgaaattacagggac 45970215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 52552806 - 52552770
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  52552806 agggatcaaaagtggaagaatctgaaattacagggac 52552770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 139; Significance: 2e-72; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 259 - 497
Target Start/End: Complemental strand, 4945 - 4707
Alignment:
Q  259 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaat 358  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| || ||||| |||||||        |||||||||| ||||  |||||||||| ||    
T  4945 ttttagggtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgtaaaaataagatttagattttgtccttgtaatttcatat 4846  T
Q  359 tcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 458  Q
    ||||||||| ||||||||||||| ||||| || || |||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  4845 tcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 4746  T
Q  459 ccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  4745 ccaaaagtgggaggaatctgaaattacacggacgtaatt 4707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 4564 - 4618
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||    
T  4564 gtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgt 4618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 4823 - 4863
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  4823 aatgagggaccaaaagtggaagaatatgaaattacaaggac 4863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 2e-72; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 259 - 497
Target Start/End: Complemental strand, 9397081 - 9396843
Alignment:
Q  259 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaat 358  Q
    |||||| |||||||| |||||| |||||||||||||||||||||| || |||||||||||||        |||||||||| |||| ||||||||||| ||    
T  9397081 ttttagggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagat 9396982  T
Q  359 tcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 458  Q
    ||||||||| |||| || ||||| || || ||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9396981 tcttccacttttggaccatcattccaacacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatgaaattacaggga 9396882  T
Q  459 ccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
     ||||||||||||||||||||||||||||||| ||||||    
T  9396881 tcaaaagtgggaggaatctgaaattacagggacgtaatt 9396843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 266 - 501
Target Start/End: Original strand, 38573971 - 38574206
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| |||| |||||||||||  |||| |||||||| |||||||        |||||||||| |||| ||||||||||| |||||||||    
T  38573971 gtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 38574070  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || ||||||||||||| ||||| ||||| |||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  38574071 cttttggtccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggaccaaaagtggaggaatatgaaattacagagaccaaaag 38574170  T
Q  466 tgggaggaatctgaaattacagggatgtaattgatg 501  Q
    ||||||||||||||||||||||||| | ||||||||    
T  38574171 tgggaggaatctgaaattacagggacgcaattgatg 38574206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 266 - 501
Target Start/End: Original strand, 46046432 - 46046662
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    |||||||||| |||| ||||||||||||||||| |||| ||||||||||||||||         |  |||||| |||| ||||||||||| |||||||||    
T  46046432 gtaaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaa-----aaatagattttgtccctgtaatttcatattcttcca 46046526  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || ||| ||||||||| ||||| || ||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46046527 cttttgatccctcattccaccacgttagtagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaag 46046626  T
Q  466 tgggaggaatctgaaattacagggatgtaattgatg 501  Q
    ||||||||||||||||||||| ||| ||||||||||    
T  46046627 tgggaggaatctgaaattacaaggacgtaattgatg 46046662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 266 - 497
Target Start/End: Original strand, 9516612 - 9516844
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||| ||||||| ||||||||||||||||| |||| || ||||||||| |||         |||||||||| ||||  |||||||||| ||||||||    
T  9516612 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttcc 9516711  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||||||||||||| ||||| || || |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9516712 acttttggtccctcattccaccacgtaagcagaatctgcatacatgatacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 9516811  T
Q  465 gtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||||| ||| ||||||    
T  9516812 gtgggaggaatctgaaattacaaggacgtaatt 9516844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 269 - 497
Target Start/End: Complemental strand, 4356253 - 4356025
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    ||||||||||||  |||||||||||||||| ||||||| ||||| || ||||         | || |||| ||||||||||||||||||||||||||||     
T  4356253 aatacctcttttcatccctgtaatattagcgaatttcggttttaatctctgtaataaaaaaaatttgattttgtctctgtaatttcaaattcttccactt 4356154  T
Q  369 ttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgg 468  Q
    ||||||||| ||| ||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |    
T  4356153 ttggtcccttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattacaaggaccaaaagtag 4356054  T
Q  469 gaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||| ||| ||||||    
T  4356053 gaggaatctgaaattacaaggacgtaatt 4356025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 329 - 497
Target Start/End: Complemental strand, 15641027 - 15640859
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||| ||||| ||||| |||| |||||||||||||||||| ||||    
T  15641027 gatttagattatgtccctgtaatttcagattcttccacttttggttcctcatttcaccacgtcagcagaatatgcatacatgacacgtaaaatgatggac 15640928  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  15640927 caaaagtggaggaatctgaaattacaaggatcaaaagtgggaggaatctgaaattacagggacgtaatt 15640859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 266 - 497
Target Start/End: Original strand, 31090062 - 31090295
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 363  Q
    |||||||| |||||||||||||||||||||||  |||||||||||||||||||||          |||||||||| |||| ||||||||||| |||||||    
T  31090062 gtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 31090161  T
Q  364 cactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    |||| ||||||||||||| ||||| || || ||||| |||| |||||  ||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  31090162 cacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgaaggaccaaaagtggaggaatctgaaattacggggaccaaa 31090261  T
Q  464 agtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||| |||||||||||||| ||| ||||||    
T  31090262 agtgggagaaatctgaaattacaaggacgtaatt 31090295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 264 - 486
Target Start/End: Complemental strand, 48260128 - 48259906
Alignment:
Q  264 gagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttc 363  Q
    ||||||||| ||||||| ||||||||||||||||| ||||| ||||||| || ||||        |||||||||| |||| |||||||||||||||||||    
T  48260128 gagtaaatatctcttttcgtccctgtaatattagcgaattttgattttaatctctgtaaaaaaaagatttagattttgtccctgtaatttcaaattcttc 48260029  T
Q  364 cactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    |||| ||| || |||||| || || ||||| | |||||||| ||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  48260028 cacttttgatcgctcattccatcacgtcagcataatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaataacagggaccaaa 48259929  T
Q  464 agtgggaggaatctgaaattaca 486  Q
    ||| |||||||||||||||||||    
T  48259928 agtaggaggaatctgaaattaca 48259906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 333 - 501
Target Start/End: Complemental strand, 7819322 - 7819154
Alignment:
Q  333 tagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaa 432  Q
    |||||| |||| ||||||| ||| ||||||||||| ||||||||||||| ||||| ||||| |||||||||| ||||| |||||||||||||||||||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaa 7819223  T
Q  433 agtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaattgatg 501  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  7819222 agtggaggaatatgaaattacatggaccaaaagtgggaggaatctgaaattacatggacgtaattgatg 7819154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 266 - 497
Target Start/End: Complemental strand, 3273994 - 3273766
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||||| ||||||||||| ||||||| ||||||||||| |        |||||||||| | || ||||||||||| |||||||||    
T  3273994 gtaaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccctataaaaaaaagatttagattttatccctgtaatttcagattcttcca 3273896  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || ||| ||||||||||||||| |||||||||||||||| ||||| |||||||||||| |||||||| |||||| |||||||||||||| ||||||||||    
T  3273895 cttttgatccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatga-ggaccaaacgtggagtaatctgaaattaca-ggaccaaaag 3273798  T
Q  466 tgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||| |||||||||| ||| ||||||    
T  3273797 tgggaggaatatgaaattacaaggacgtaatt 3273766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 269 - 486
Target Start/End: Complemental strand, 3018383 - 3018167
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    |||| ||||||| ||||||||||||||| | ||||||| |||||||||||||        |||||||||| ||||  |||||||||| ||||| |||||     
T  3018383 aatatctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaagatttagatt-tgtccgtgtaatttcagattctaccactt 3018285  T
Q  369 ttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgg 468  Q
    ||||||||| ||| ||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  3018284 ttggtcccttattccaccacgtcagcataatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattatagggaccaaaagtgg 3018185  T
Q  469 gaggaatctgaaattaca 486  Q
    ||||||| ||||||||||    
T  3018184 gaggaatgtgaaattaca 3018167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 266 - 497
Target Start/End: Original strand, 34063984 - 34064216
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||| | ||||    |||||||||||||         |||||||||| |||||||||||||||| ||||||||    
T  34063984 gtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttcc 34064083  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||||||||||||| |||||  ||||  |||||| || ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34064084 acttttggtccctcattccaccacatcagccgaatctacatacatggcatgtaaaatgagggactaaaagtggaggaatctgaaattacagggaccaaaa 34064183  T
Q  465 gtgggaggaatctgaaattacagggatgtaatt 497  Q
    || ||||||||||||||||||| ||| ||||||    
T  34064184 gtaggaggaatctgaaattacaaggacgtaatt 34064216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 266 - 490
Target Start/End: Complemental strand, 9619355 - 9619130
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||||||||||||||||||||| ||||  | |||||||||||||         |||||||||| ||||  |||||||||| ||||||||    
T  9619355 gtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcatattcttcc 9619256  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||||||| ||||| ||||| || || |||||||| | || || ||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  9619255 acttttggtccttcattccaccacgtaagcagaatctgtatacctggcacgtaaaaagagggagcaaaagtggaggaatctgaaattacagggaccaaaa 9619156  T
Q  465 gtgggaggaatctgaaattacaggga 490  Q
     |||||||||| ||||||||||||||    
T  9619155 atgggaggaatatgaaattacaggga 9619130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 267 - 497
Target Start/End: Original strand, 13131943 - 13132175
Alignment:
Q  267 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    |||||||||||||| |||| |||||||||| | ||||||  |||||||||||||          ||||||||||||||   |||||||||| ||||||||    
T  13131943 taaatacctcttttcgtccttgtaatattaacgaatttctgttttagtccctgtaaaaaaaaaagatttagattatgttcatgtaatttcagattcttcc 13132042  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||| ||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| | |||||||||| |||||||||||||| |||||||||    
T  13132043 acttttgatccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgaggggctaaaagtggagtaatctgaaattacatggaccaaaa 13132142  T
Q  465 gtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||| ||| |||||||||| ||| ||||||    
T  13132143 gtgggagaaatatgaaattacaaggacgtaatt 13132175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 266 - 501
Target Start/End: Complemental strand, 31944326 - 31944090
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaaattcttcc 364  Q
    |||||||| |||||| |||| |||||||||||| ||||||| |||||||| ||||          | ||||||| ||||  |||||||||| ||||||||    
T  31944326 gtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtctctgtaaaaaaaaataattagattttgtccatgtaatttcatattcttcc 31944227  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| || |||||||||| ||||| ||||  |||||||||| || || ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31944226 actttttgtccctcattccaccacgtcaacagaatctgcatacttggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacatggaccaaaa 31944127  T
Q  465 gtgggaggaatctgaaattacagggatgtaattgatg 501  Q
    |||||||||||||||||||||| |||  |||||||||    
T  31944126 gtgggaggaatctgaaattacatggacataattgatg 31944090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 329 - 497
Target Start/End: Original strand, 37012773 - 37012941
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| |||| ||||||||||| ||||||||||| ||||||||| ||| ||||| ||||| |||||||||| ||||| |||||||||||||||||    
T  37012773 gatttagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggac 37012872  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||| |||||||||| ||||||||||| ||| |||| |||||||||||||| ||||||    
T  37012873 caaaagtggaggaatttgaaattacaaggaccaaaagtaggaagaatatgaaattacagggacgtaatt 37012941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 345 - 497
Target Start/End: Complemental strand, 18667585 - 18667433
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatc 444  Q
    ||||||||||| ||||||||| | || |||||| ||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||     
T  18667585 ctgtaatttcagattcttccagtttttgtcccttattccaccacgtcagtagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatt 18667486  T
Q  445 tgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    | |||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  18667485 taaaattacagggaccaaaagttggaggaatctgaaattacagggacgtaatt 18667433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 269 - 497
Target Start/End: Complemental strand, 18713335 - 18713104
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtc---cctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    |||||||||||| || |||||| ||||||| | ||||| ||||||||   |||||        |||||||||| |||||||||||||||| |||||||||    
T  18713335 aatacctcttttcgtacctgtattattagcgagtttcggttttagtcgtccctgtaaaaaaaagatttagattttgtctctgtaatttcagattcttcca 18713236  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
     | ||||||||| ||| ||||| ||||| ||||||| || ||||   ||||||| ||||||||||||||| ||||||| |||||||||| ||||||||||    
T  18713235 gttttggtcccttattccaccacgtcagcagaatctacatacattgaacgtaaactgagggaccaaaagttgaggaatttgaaattacatggaccaaaag 18713136  T
Q  466 tgggaggaatctgaaattacagggatgtaatt 497  Q
     |||||||||||||||||||||||| ||||||    
T  18713135 agggaggaatctgaaattacagggacgtaatt 18713104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 269 - 497
Target Start/End: Original strand, 48579871 - 48580100
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttccact 367  Q
    |||||||||||| ||||||||||||||| | || |||| ||||||||  |||         |||||||||| |||||||||||||||| |||||| || |    
T  48579871 aatacctcttttcgtccctgtaatattaacgaagttcggttttagtctatgtaaaaaaaaagatttagattttgtctctgtaatttcagattctttcaat 48579970  T
Q  368 gttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtg 467  Q
     ||||||||| ||| ||||| ||||| ||||||| || ||||| |||||||||||||||| ||||||||||||||| |||||||| || |||||||||||    
T  48579971 tttggtcccttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggagcaaaagtggaggaatttgaaattagagagaccaaaagtg 48580070  T
Q  468 ggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||| |||||||||| ||| ||||||    
T  48580071 ggaggaatttgaaattacaaggacgtaatt 48580100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 267 - 446
Target Start/End: Complemental strand, 35376502 - 35376322
Alignment:
Q  267 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccac 366  Q
    |||||| ||||||| |||||||||||||||||||||| |  |||||||||||||        |||||| ||| |||| ||||||||||| | ||||||||    
T  35376502 taaatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgtaaaaaaaagatttaaattttgtccctgtaatttcagaatcttccac 35376403  T
Q  367 tgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagt-ggaggaatctg 446  Q
    | ||||||||||||| ||||| ||||| | |||||| | |||||||||||||||||||||||||||||| |||||||||||    
T  35376402 ttttggtccctcattccaccacgtcagcaaaatctgtatacatgacacgtaaaatgagggaccaaaagtgggaggaatctg 35376322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 266 - 459
Target Start/End: Complemental strand, 26252613 - 26252418
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||| ||||||| ||||||||||||||||| |||| |  ||||||| |||||         |||||||||| |||| ||||||||||| ||||||||    
T  26252613 gtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 26252514  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagt-ggaggaatctgaaattacagggac 459  Q
    ||| |||||||| |||| ||| | || || |||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26252513 acttttggtcccccattccactacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 26252418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 267 - 404
Target Start/End: Original strand, 9396702 - 9396840
Alignment:
Q  267 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctg-tnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||| ||| |        |||||||||| |||| || |||||||||||| |||||    
T  9396702 taaatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatttcaaatttttcca 9396801  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || |||||||||| ||||| || ||||| ||||||||||    
T  9396802 cttttggtccctcctttcatcacgtcagcagaatctgca 9396840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 13132315 - 13132178
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||||| |||||        |||||||||| |||| ||||||||||| |||||||||    
T  13132315 gtaaatacctattttcgtccctgtaatattagcgaatttcgattttagt-cctgtaaaaaaaagatttagattctgtccctgtaatttcatattcttcca 13132217  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || |||||||||  ||||| ||  |||| ||||||||||    
T  13132216 cttttggtcccttctttcatcaaatcagcagaatctgca 13132178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 267 - 404
Target Start/End: Original strand, 3018014 - 3018153
Alignment:
Q  267 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    |||||||||||||| ||||||||||||||||| |||| || |||||||||| ||          |||||||||| |||| ||||||||||| ||||||||    
T  3018014 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 3018113  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| |||||||||| ||||| || ||||| ||||||||||    
T  3018114 acttttggtccctcctttcatcacgtcagcagaatctgca 3018153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 261 - 404
Target Start/End: Original strand, 9618977 - 9619121
Alignment:
Q  261 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaatt 359  Q
    ||||||||||||||| |||| |||| |||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| |||    
T  9618977 ttagagtaaatacctattttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagatt 9619076  T
Q  360 cttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||| |||||||||| ||||| || ||||  ||||||||||    
T  9619077 cttccacttttggtccctcctttcatcaagtcaacagaatctgca 9619121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 266 - 400
Target Start/End: Original strand, 35376165 - 35376299
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    |||||||||| |||| ||||||||||||||||| ||||  | |||||||||||||        |||||||||| |||||||||||||| | |||||||||    
T  35376165 gtaaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaagatttagattttgtctctgtaattttagattcttcca 35376264  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatc 400  Q
    || |||||| ||| ||||| || ||||| ||||||    
T  35376265 cttttggtctctcctttcatcacgtcagcagaatc 35376299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 266 - 401
Target Start/End: Complemental strand, 31090437 - 31090301
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||          | ||||||| |||| ||||||||||| |||||||     
T  31090437 gtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattcttct 31090338  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatct 401  Q
    ||| |||||||||| ||||| || |||| ||||||||    
T  31090337 acttttggtccctcctttcatcaagtcaatagaatct 31090301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 404
Target Start/End: Original strand, 3273618 - 3273763
Alignment:
Q  261 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngattta--gattatgtctctgtaatttcaaat 358  Q
    |||| ||||||| ||||||| ||||||||||||||||| |||| ||||||||||||| ||          ||||  |||| |||| ||||||||||| ||    
T  3273618 ttagggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtccccgtaatttttttttttatagattttgtccctgtaatttcatat 3273717  T
Q  359 tcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||||||||| |||||||||| ||||| || |||| |||||||||||    
T  3273718 tcttccacttttggtccctcctttcatcaagtcattagaatctgca 3273763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 384
Target Start/End: Original strand, 15640724 - 15640836
Alignment:
Q  272 acctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttg 371  Q
    ||||||||| ||||||||||||||||| |||| || ||||||| |||||        |||||||||| |||| ||||||||||| |||||| |||| |||    
T  15640724 acctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattctttcacttttg 15640823  T
Q  372 gtccctcatttca 384  Q
    ||||||| |||||    
T  15640824 gtccctcctttca 15640836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 269 - 404
Target Start/End: Original strand, 4355887 - 4356022
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    ||||||||||||||| | | |||||||||| |||| || ||||||| |||||        | |||||||| ||||| |||||||||| |||||| ||||     
T  4355887 aatacctctttttgttcatataatattagcgaattccggttttagttcctgtaaaaacaagctttagattttgtctatgtaatttcatattctttcactt 4355986  T
Q  369 ttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||||||||||| || || || ||||||||||    
T  4355987 ttggtccctcatttcatcacgttagcagaatctgca 4356022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 266 - 384
Target Start/End: Complemental strand, 9516986 - 9516867
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||| ||||||| ||||||||||||||||| ||||||| |||||||| ||||         |||||||||| |||| ||||||||||| |||||||     
T  9516986 gtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttct 9516887  T
Q  365 actgttggtccctcatttca 384  Q
    ||| |||||||||| |||||    
T  9516886 acttttggtccctcctttca 9516867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 329 - 404
Target Start/End: Complemental strand, 34064294 - 34064219
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||||| |||||||||||||||| ||||||||||| |||||||||  ||||| || ||||| ||||||||||    
T  34064294 gatttagattttgtctctgtaatttcagattcttccacttttggtcccttctttcatcacgtcagcagaatctgca 34064219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 46046799 - 46046661
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    |||||||||| |||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  46046799 gtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcc 46046701  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| ||| |||||| ||||| || ||||| | ||||||||    
T  46046700 acttttgatccctcctttcatcacgtcagcaaaatctgca 46046661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 37013082 - 37012944
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||| ||| ||||||||||||||||| ||||  | |||||||||||||         | ||||||| |||| ||||||||||| |||||||||    
T  37013082 gtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgtataaaaaaaaattagattttgtccctgtaatttcatattcttcca 37012983  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || |||||| ||| ||||| || ||||| | ||||||||    
T  37012982 cttttggtcactcctttcatcacgtcagcaaaatctgca 37012944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 267 - 384
Target Start/End: Complemental strand, 38574343 - 38574225
Alignment:
Q  267 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||| |||| ||||||||||||||||| ||||  | |||||||||||||         |||||||||| |||| ||||||||||| |||||||||    
T  38574343 taaataccttttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttcca 38574244  T
Q  366 ctgttggtccctcatttca 384  Q
    || |||||||||| |||||    
T  38574243 cttttggtccctcctttca 38574225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 406
Target Start/End: Complemental strand, 36889051 - 36888915
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    |||||| ||||| |||||| |||||||||| ||||| | ||||||||| |||         |||||||||||||| ||||||||||| |||| ||||||     
T  36889051 aataccacttttggtccctataatattagcgaattttggttttagtcc-tgtaaaaaaaaaatttagattatgtccctgtaatttcagattcctccactt 36888953  T
Q  369 ttggtccctcatttcaccatgtcagtagaatctgcaca 406  Q
    || ||||||| ||| ||| |||||| ||||||||||||    
T  36888952 ttagtccctcgtttaaccttgtcagcagaatctgcaca 36888915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 497
Target Start/End: Complemental strand, 26252455 - 26252412
Alignment:
Q  454 agggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  26252455 agggaccaaaagtgggaggaatctgaaattacagggacgtaatt 26252412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 31218357 - 31218303
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||    
T  31218357 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 31218303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 387
Target Start/End: Original strand, 12904749 - 12904870
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||| ||||||| |||||| |||||||||| ||||| | |||||||||||||         ||||||||| ||||  | |||||||| |||||||||    
T  12904749 gtaaatatctcttttcgtccctataatattagcgaattttggttttagtccctgtaaaaaaaaaatttagattttgtccttataatttcagattcttcca 12904848  T
Q  366 ctgttggtccctcatttcacca 387  Q
    || |||||| |||||| |||||    
T  12904849 cttttggtctctcattccacca 12904870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 26252337 - 26252409
Alignment:
Q  332 ttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||||||| |||| ||||||||||| ||||||||||| |||||||||| ||||| || ||||  ||||||||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcaagtcaacagaatctgca 26252409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 404
Target Start/End: Original strand, 7819080 - 7819155
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||||| |||| ||||||||||| ||||||||||| ||||| |||| ||||| || || |||| ||||||||    
T  7819080 gatttagattttgtccctgtaatttcagattcttccacttttggttcctcctttcatcacgttagtaaaatctgca 7819155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 31943946 - 31944071
Alignment:
Q  260 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaa 357  Q
    ||||| |||||||| |||||| ||||||||||||||||| |||| || ||||||| |||||          |||||||||| |||| ||||||||||| |    
T  31943946 tttagggtaaatac-tcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcata 31944044  T
Q  358 ttcttccactgttggtccctcatttca 384  Q
    |||||||||| |||||| ||| |||||    
T  31944045 ttcttccacttttggtctctcctttca 31944071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 320
Target Start/End: Original strand, 36887685 - 36887736
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    |||||||||||| ||||||||||||||||| ||||| | |||||||||||||    
T  36887685 aatacctcttttggtccctgtaatattagcgaattttggttttagtccctgt 36887736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 41947230 - 41947180
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 316  Q
    ||||||| ||||||| ||||||||||||||||| ||||||| |||||||||    
T  41947230 gtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtcc 41947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 320
Target Start/End: Original strand, 43312227 - 43312265
Alignment:
Q  282 gtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  43312227 gtccctgtaatattagcaaattccgattttagtccctgt 43312265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 9619095 - 9619058
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  9619095 gagggaccaaaagtggaagaatctgaaattacagggac 9619058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 459
Target Start/End: Original strand, 15640974 - 15641015
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  15640974 aaatgaggaaccaaaagtggaagaatctgaaattacagggac 15641015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 26252383 - 26252346
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  26252383 gagggaccaaaagtggaagaatctgaaattacagggac 26252346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 36888943 - 36888980
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  36888943 gagggactaaaagtggaggaatctgaaattacagggac 36888980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 319
Target Start/End: Original strand, 41946967 - 41947020
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctg 319  Q
    ||||||||||||||| ||||||||||||||||  |||| || ||||||||||||    
T  41946967 gtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctg 41947020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 43312324 - 43312287
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  43312324 gagggactaaaagtggaggaatctgaaattacagggac 43312287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 458
Target Start/End: Original strand, 3273879 - 3273919
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacaggga 458  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  3273879 aaatgagggatcaaaagtggaagaatctgaaattacaggga 3273919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 7819274 - 7819314
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  7819274 aatgagggaccaaaagtggaagaatctgacattacagggac 7819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 31090179 - 31090139
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  31090179 aatgagggaccaaaagtggaagaatatgaaattacagggac 31090139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 34064100 - 34064064
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacag 455  Q
    |||||||||||||||||||| ||||||||||||||||    
T  34064100 aatgagggaccaaaagtggaagaatctgaaattacag 34064064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 35376388 - 35376428
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  35376388 aatgagggaccaaaagtggaagattctgaaattacagggac 35376428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 37012821 - 37012785
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| ||||||||||||||||||||    
T  37012821 agggaccaaaagtggaagaatctgaaattacagggac 37012785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 38574086 - 38574046
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  38574086 aatgagggaccaaaagtggaagaatatgaaattacagggac 38574046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 404
Target Start/End: Original strand, 18713026 - 18713101
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||||| |||| ||||||||||| ||| ||||| | |||||||||| ||||| || ||||| | ||||||||    
T  18713026 gatttagattttgtccctgtaatttcatattgttccaattttggtccctcctttcatcacgtcagcaaaatctgca 18713101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 384
Target Start/End: Complemental strand, 48580178 - 48580123
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttca 384  Q
    |||||||||| |||| ||||||||||| ||| ||||||| |||||||||| |||||    
T  48580178 gatttagattttgtccctgtaatttcatattgttccacttttggtccctcctttca 48580123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 46935212 - 46935170
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgatttt 311  Q
    |||||||||||| |||||| |||||||||| ||||||||||||    
T  46935212 aatacctcttttggtccctataatattagcgaatttcgatttt 46935170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 48259825 - 48259879
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||||| ||||||| ||||||||||||||||| |||| || ||||| |||||||    
T  48259825 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttaatccctgt 48259879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 320
Target Start/End: Complemental strand, 51029141 - 51029095
Alignment:
Q  274 ctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||||| ||||||||||||| ||| ||||||| |||||||||||||    
T  51029141 ctcttttggtccctgtaatatgagcgaatttcggttttagtccctgt 51029095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 3018127 - 3018090
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  3018127 gagggaccaaaagtggaagaatatgaaattacagggac 3018090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 3273737 - 3273700
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  3273737 gagggaccaaaagtggaagaatatgaaattacagggac 3273700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 7819129 - 7819092
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  7819129 gaggaaccaaaagtggaagaatctgaaattacagggac 7819092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 9516873 - 9516910
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||| || ||||||||||||||||||||    
T  9516873 gagggaccaaaagtagaagaatctgaaattacagggac 9516910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 31090324 - 31090361
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||| || ||||||||||||||||||||    
T  31090324 gagggaccaaaagtagaagaatctgaaattacagggac 31090361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 38574164 - 38574123
Alignment:
Q  341 gtctctgtaatttcaaattcttccactgttggtccctcattt 382  Q
    ||||||||||||||| |||| |||||| ||||||||||||||    
T  38574164 gtctctgtaatttcatattcctccacttttggtccctcattt 38574123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 38574231 - 38574268
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  38574231 gagggaccaaaagtggaagaatatgaaattacagggac 38574268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 46046687 - 46046724
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  46046687 gagggatcaaaagtggaagaatctgaaattacagggac 46046724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 4356068 - 4356104
Alignment:
Q  346 tgtaatttcaaattcttccactgttggtccctcattt 382  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  4356068 tgtaatttcaaattcctccacttttggtccctcattt 4356104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 9396959 - 9396999
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||| || ||||||||||| ||||||||||||||||||||    
T  9396959 aatgatggtccaaaagtggaagaatctgaaattacagggac 9396999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 9516728 - 9516688
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  9516728 aatgagggaccaaaagtggaagaatatgaaattacaaggac 9516688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 418 - 454
Target Start/End: Complemental strand, 13132060 - 13132024
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattaca 454  Q
    |||||||||| |||||||||| |||||||||||||||    
T  13132060 aaatgagggatcaaaagtggaagaatctgaaattaca 13132024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 13132205 - 13132241
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| |||| |||||||||||||||    
T  13132205 agggaccaaaagtggaagaatatgaaattacagggac 13132241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 403
Target Start/End: Complemental strand, 20069610 - 20069538
Alignment:
Q  331 tttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgc 403  Q
    ||||||||||||| || | |||| | ||||||||||| |||||| ||||||  | |||||||| |||||||||    
T  20069610 tttagattatgtccctatcatttgagattcttccacttttggtctctcattgaaacatgtcagcagaatctgc 20069538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 26252497 - 26252537
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||| ||||||||||||||| |||| |||||||||||||||    
T  26252497 aatgggggaccaaaagtggaagaatatgaaattacagggac 26252537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 455
Target Start/End: Original strand, 34064246 - 34064278
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacag 455  Q
    |||||||||||||||| ||||||||||||||||    
T  34064246 agggaccaaaagtggaagaatctgaaattacag 34064278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 37012898 - 37012862
Alignment:
Q  346 tgtaatttcaaattcttccactgttggtccctcattt 382  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  37012898 tgtaatttcaaattcctccacttttggtccctcattt 37012862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 46046542 - 46046502
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||| |||||||||| |||| |||||||||||||||    
T  46046542 aatgagggatcaaaagtggaagaatatgaaattacagggac 46046502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 6e-69; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 269 - 497
Target Start/End: Original strand, 7125923 - 7126151
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    |||||||||||| || |||||||||||||| |||| ||||||||||||||||        |||||||||| |||| || |||||||| |||||||||||     
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtccctataatttcagattcttccactt 7126022  T
Q  369 ttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgg 468  Q
    ||||||||| ||| ||||| ||||| |||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7126023 ttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaagtgg 7126122  T
Q  469 gaggaatctgaaattacagggatgtaatt 497  Q
    ||||||| |||||||||||||| ||||||    
T  7126123 gaggaatatgaaattacagggacgtaatt 7126151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 329 - 497
Target Start/End: Original strand, 20709278 - 20709446
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||    
T  20709278 gatttagattctgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggac 20709377  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
     |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20709378 aaaaagtggaggaatatgaaattacagggatcaaaagtgggaggaatctgaaattacagggatgtaatt 20709446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 266 - 497
Target Start/End: Complemental strand, 23979277 - 23979046
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||||||||||||    
T  23979277 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattcttcc 23979178  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||||||||||||||||||| ||||| |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||| |||||||||||    
T  23979177 acttttggtccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatga-ggaccaaacgtggagtaatctgaaattaaagggaccaaaa 23979079  T
Q  465 gtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||| ||| |||||||||| ||| ||||||    
T  23979078 gtgggagaaatatgaaattacaaggacgtaatt 23979046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 260 - 497
Target Start/End: Complemental strand, 14144283 - 14144045
Alignment:
Q  260 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaat 358  Q
    ||||| || |||||||||||| ||| ||||||||||| | |||| ||||||||||||||||         |||||||||| |||| ||||||||||||||    
T  14144283 tttagggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaat 14144184  T
Q  359 tcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 458  Q
    ||||||||| ||||||||| ||| ||||| ||||  |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| |||    
T  14144183 tcttccacttttggtcccttattccaccacgtcaccagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacatgga 14144084  T
Q  459 ccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  14144083 ccaaaagtggaaggaatctgaaattacagggacgtaatt 14144045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 266 - 497
Target Start/End: Original strand, 6817125 - 6817355
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| |||| |||||||||||  |||| || |||||||||||||        |||||||||||||||  |||||||||| |||||||||    
T  6817125 gtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaagatttagattatgtccatgtaatttcagattcttcca 6817224  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || ||||||||||||||||||| ||||| |||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||||| | | ||||||    
T  6817225 cttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaataagggaccaaaaatggaggaatctgaaattaca-gaatcaaaag 6817323  T
Q  466 tgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||| |||||||||||||| ||||||    
T  6817324 tgggaggaatttgaaattacagggacgtaatt 6817355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 266 - 497
Target Start/End: Original strand, 24837171 - 24837403
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| |||||||||||| |||| |||| || |||||||||||||         |||||||||| ||||  |||||||||| ||||||||    
T  24837171 gtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttcc 24837270  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||||||||||||| ||||| || || |||||||| | |||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24837271 acttttggtccctcattccaccacgtaagcagaatctgtatacatggtacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaa 24837370  T
Q  465 gtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||| |||||||||||||||||| ||| ||||||    
T  24837371 gtgagaggaatctgaaattacaaggacgtaatt 24837403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 266 - 497
Target Start/End: Original strand, 993752 - 993980
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    |||||||| |||||| ||| ||||||||||||| |||| || |||||||||||||         | |||||||  |||  |||||||||| |||||||||    
T  993752 gtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaa--aattagatttagtccttgtaatttcatattcttcca 993849  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || ||||||||||||| ||||| || || |||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  993850 cttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatg-aattacagggaccaaaag 993948  T
Q  466 tgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||||||||||||| ||||||    
T  993949 tgggaggaatctgaaattacagggacgtaatt 993980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 266 - 497
Target Start/End: Original strand, 31799642 - 31799874
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| |||||| |||||||||| |||| || ||| |||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  31799642 gtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcc 31799741  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||||||||| ||| ||||| || || ||||| || | ||||| || ||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  31799742 acttttggtcccttattccaccacgtaagcagaatttgtatacatggcatgtaaaatgagggaccaaaagtggaggattttgaaattacagggaccaaaa 31799841  T
Q  465 gtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||| ||||| ||||||    
T  31799842 gtgggaggaatctgaaattaaagggacgtaatt 31799874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 259 - 497
Target Start/End: Complemental strand, 17762665 - 17762426
Alignment:
Q  259 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaa 357  Q
    |||||| ||||||||||||||| ||||||||| ||||||| ||||  | |||||||||||||         |||||||||| |||| |  |||||||| |    
T  17762665 ttttagggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccataatttcaga 17762566  T
Q  358 ttcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggg 457  Q
    |||||||||| ||||||||||||| ||||| || || ||||| |||| |||||  || |||||||||||||||||||||||||||||| |||||||||||    
T  17762565 ttcttccacttttggtccctcattccaccacgtaagcagaatttgcatacatgggacataaaatgagggaccaaaagtggaggaatctaaaattacaggg 17762466  T
Q  458 accaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||| ||||||||| |||||||||||||| ||||||    
T  17762465 accaaaagcgggaggaatatgaaattacagggacgtaatt 17762426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 266 - 497
Target Start/End: Original strand, 4918991 - 4919224
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 363  Q
    |||||||||||||||  || ||||||||||||| ||||||| ||||||| |||||          |||||||||| |||| ||||||||||| |||||||    
T  4918991 gtaaatacctcttttcatctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 4919090  T
Q  364 cactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    |||| ||||||||||||| ||||| || || ||||| |||| |||||  ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  4919091 cacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgagggaccaaaagtggaggaatttgaaattacagtgaccaaa 4919190  T
Q  464 agtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||| |||||||| |||||||||| ||| ||||||    
T  4919191 agttggaggaatatgaaattacaaggacgtaatt 4919224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 266 - 497
Target Start/End: Original strand, 24650704 - 24650933
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||||||||||||||| | ||||||| ||||| ||  |||        |||||||||| |||  ||||||||||| |||||||||    
T  24650704 gtaaatacctcttttcgtccctgtaatattaacgaatttcggttttaatctatgtaaaaaaa-gatttagattttgttcctgtaatttcatattcttcca 24650802  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || |||||  |||||| ||||| ||||| | |||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  24650803 cttttggtagctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaaaaatggaggaatctgaaattacagggacc-aaag 24650901  T
Q  466 tgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||| ||| |||||||||||||||||||||    
T  24650902 tgggagaaatatgaaattacagggatgtaatt 24650933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 282 - 487
Target Start/End: Original strand, 41001374 - 41001577
Alignment:
Q  282 gtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatt 381  Q
    ||||||||||||||||| ||||||| |||||||||||||         | ||||||| |||| ||||||||||| ||||||||||| ||||||| |||||    
T  41001374 gtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaa--aattagattttgtccctgtaatttcatattcttccacttttggtccttcatt 41001471  T
Q  382 tcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaa 481  Q
     |||||||| || |||||||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||  |||||    
T  41001472 ccaccatgtaagcagaatctgcatacatggcacgtaaaatgagggactaaaaatggaggaatctgaaattacagggaccagaagtgggaggaagatgaaa 41001571  T
Q  482 ttacag 487  Q
    ||||||    
T  41001572 ttacag 41001577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 329 - 497
Target Start/End: Complemental strand, 29445118 - 29444950
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| ||||  |||||||||| ||||||||||| ||||||||| ||| ||||| ||||||| ||| |||| |||||||||||||||||||||||    
T  29445118 gatttagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagtaaaatttgcatacatgacacgtaaaatgagggac 29445019  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
     |||| || |||||| |||||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  29445018 aaaaaatgtaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacagggacgtaatt 29444950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 266 - 459
Target Start/End: Complemental strand, 18336831 - 18336638
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| |||||||||| |||||| |||| || |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  18336831 gtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcc 18336733  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||| ||| ||||| ||| |||||||| || ||||| || | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18336732 acttttgatcccttattacaccatgtaagcagaatttgtatacatgtcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 18336638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 259 - 459
Target Start/End: Complemental strand, 14412048 - 14411847
Alignment:
Q  259 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaat 358  Q
    |||||| |||||||||||||||  || || |||||||| | ||||||| |||||||||||||         ||||||||| ||||  |||||||||| ||    
T  14412048 ttttagggtaaatacctcttttcatctctataatattaacgaatttcggttttagtccctgtaaaaaaaaaatttagattttgtccttgtaatttcagat 14411949  T
Q  359 tcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagt-ggaggaatctgaaattacaggg 457  Q
    ||||||||  ||||||||||||| ||||| || || ||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14411948 tcttccacgtttggtccctcattccaccacgtaagcagaatctacatacatgacacgtaaaatgagggaccaaaagtgggaggaatctgaaattacaggg 14411849  T
Q  458 ac 459  Q
    ||    
T  14411848 ac 14411847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 277 - 497
Target Start/End: Original strand, 22571090 - 22571311
Alignment:
Q  277 tttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnnga-tttagattatgtctctgtaatttcaaattcttccactgttggtcc 375  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||         | |||||||||| |||||||||||||| ||||||||||| |||||||    
T  22571090 tttttgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatttagattatatctctgtaatttcatattcttccacttttggtcc 22571189  T
Q  376 ctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaat 475  Q
    |||||||||||| ||||  ||||| ||    | ||| |||| ||||||||||||||||| ||| |||| |||||||| |||||||||| || |||||||     
T  22571190 ctcatttcaccacgtcaaaagaatatgtgtgcgtgatacgtgaaatgagggaccaaaagcggatgaatatgaaattagagggaccaaatgtaggaggaac 22571289  T
Q  476 ctgaaattacagggatgtaatt 497  Q
    ||||||||||||||| ||||||    
T  22571290 ctgaaattacagggacgtaatt 22571311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 329 - 497
Target Start/End: Complemental strand, 24074614 - 24074447
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| ||||  |||||||||| ||||||||||| ||||||||| |||| |||| ||||| |||||||||| | ||| |||||||||||||||||    
T  24074614 gatttagattttgtccttgtaatttcatattcttccacttttggtcccttatttaaccacgtcagcagaatctgcatatatggcacgtaaaatgagggac 24074515  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||| ||| |||||||||| ||| ||||||||||| |||||||||||||  |||| ||||||    
T  24074514 caaaagtggagaaatttgaaattaca-ggatcaaaagtgggatgaatctgaaattatggggacgtaatt 24074447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 14143904 - 14144042
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||        |||||||||| |||| ||||||||||| |||||||||    
T  14143904 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 14144003  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || ||||| |||||||||| || ||||||||||||||||    
T  14144004 cttttggtacctcatttcatcacgtcagtagaatctgca 14144042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 459
Target Start/End: Original strand, 27158996 - 27159185
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    |||||||||||| |||| |||||||||||| ||||||  |||||||| | ||        |||||| ||| |||| ||||||||||| |||||||||||     
T  27158996 aatacctcttttcgtccatgtaatattagcgaatttcagttttagtctcagttaaaaaaagatttaaattttgtccctgtaatttcagattcttccactt 27159095  T
Q  369 ttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagt-ggaggaatctgaaattacagggac 459  Q
    ||||||||| ||| ||||| ||||| | |||||  ||| | | |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  27159096 ttggtcccttattccaccacgtcagcaaaatct--acatacggcacgtaaaatgagggatcaaaagtgggaggaatctgaaattacagggac 27159185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 266 - 434
Target Start/End: Original strand, 30512290 - 30512459
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||| ||||||| ||||||||||||||||  ||||| | |||||||||||||        ||||||||||  ||| ||||||||||| ||| |||||    
T  30512290 gtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaggatttagatttggtccctgtaatttcagatttttcca 30512389  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgt-aaaatgagggaccaaaag 434  Q
    || ||||||||||||| ||||| || || |||||||||| ||||| ||||| |||||||||||| |||||    
T  30512390 cttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaaatgagggacgaaaag 30512459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 266 - 434
Target Start/End: Original strand, 30552630 - 30552799
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||| ||||||| ||||||||||||||||  ||||| | |||||||||||||        ||||||||||  ||| ||||||||||| ||| |||||    
T  30552630 gtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaggatttagatttggtccctgtaatttcagatttttcca 30552729  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgt-aaaatgagggaccaaaag 434  Q
    || ||||||||||||| ||||| || || |||||||||| ||||| ||||| |||||||||||| |||||    
T  30552730 cttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaaatgagggacgaaaag 30552799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 261 - 404
Target Start/End: Original strand, 24074300 - 24074444
Alignment:
Q  261 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaaatt 359  Q
    |||| ||||||||||||||| |||| |||||||||||| ||||||| |||||||||||||          ||||||||| |||||||||||||||| |||    
T  24074300 ttagggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatatt 24074399  T
Q  360 cttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||| |||||||||| ||||| || ||||| ||||||||||    
T  24074400 cttccacttttggtccctcctttcatcacgtcagcagaatctgca 24074444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 17762285 - 17762423
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||||||||||||||||||||| |||| || |||||||||||||        |||||| ||| |||  ||||||||||| |||||||||    
T  17762285 gtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttatattttgttcctgtaatttcagattcttcca 17762384  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || |||||||||| ||| | || || || ||||||||||    
T  17762385 cttttggtccctcctttaatcacgtaagcagaatctgca 17762423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 260 - 404
Target Start/End: Original strand, 14411693 - 14411838
Alignment:
Q  260 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaat 358  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||         |||||| ||| ||||| |||||||||| ||    
T  14411693 tttagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtataaaaaaagatttatattttgtctatgtaatttcagat 14411792  T
Q  359 tcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||||||||| |||||||||| ||||| || ||||| ||||| ||||    
T  14411793 tcttccacttttggtccctcctttcatcacgtcagcagaatttgca 14411838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 404
Target Start/End: Complemental strand, 7126299 - 7126154
Alignment:
Q  260 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaat 358  Q
    ||||| |||||||||||||||  |||||||||||||||| |||| || ||||||||  |||         |||||||||| |||| ||||||||||| ||    
T  7126299 tttagggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatat 7126200  T
Q  359 tcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||||||||| |||||||||| ||||| || ||||| ||||||||||    
T  7126199 tcttccacttttggtccctcctttcatcacgtcagcagaatctgca 7126154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 24837545 - 24837406
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| |||| |  |||||||||||||         |||||||||| |||| |||||||||||||||||||     
T  24837545 gtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattcttct 24837446  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| ||| |||||| ||||| || ||||  ||||||||||    
T  24837445 acttttgctccctcctttcatcaagtcaacagaatctgca 24837406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 266 - 384
Target Start/End: Complemental strand, 41001728 - 41001610
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    |||||||||| |||| ||||||||||||||||| |||| || ||||||||| |||        |||||||||| |||| || |||||||| |||||||||    
T  41001728 gtaaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaagatttagattttgtccctataatttcagattcttcca 41001629  T
Q  366 ctgttggtccctcatttca 384  Q
    || |||||||||| |||||    
T  41001628 cttttggtccctcctttca 41001610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 29444810 - 29444947
Alignment:
Q  268 aaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaaattcttccac 366  Q
    ||||| ||||||| ||||||||||||||| | ||||  |||||||||||||||        | ||||||||||||||  |||||||||| ||||||| ||    
T  29444810 aaatatctcttttcgtccctgtaatattaacgaattctgattttagtccctgtaaaaaaaaggatttagattatgtccttgtaatttcatattcttctac 29444909  T
Q  367 tgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    | |||||||||| ||||| || ||||| ||||||||||    
T  29444910 ttttggtccctcctttcatcacgtcagcagaatctgca 29444947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 402
Target Start/End: Complemental strand, 994121 - 993985
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    |||||||||| |||||||||| |||||| |||| ||||||| |||||||||||||         |||||||||| |||| |||||||| || ||||||||    
T  994121 gtaaatacct-tttttgtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagattcttcc 994023  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctg 402  Q
    ||| |||||||||| ||| | |||||||  ||||||||    
T  994022 acttttggtccctccttttatcatgtcaacagaatctg 993985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 497
Target Start/End: Complemental strand, 14411884 - 14411841
Alignment:
Q  454 agggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  14411884 agggaccaaaagtgggaggaatctgaaattacagggacgtaatt 14411841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 404
Target Start/End: Complemental strand, 27159327 - 27159194
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    |||||||||||| |||| |||||||||||| ||||||| ||||||||| |||         ||||||||| |||| ||||||||| | ||||||||| |     
T  27159327 aatacctcttttcgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaa--atttagattttgtccctgtaattttatattcttccattt 27159230  T
Q  369 ttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||||  ||||| || ||||| ||||||||||    
T  27159229 ttggtcccttctttcatcacgtcagcagaatctgca 27159194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 384
Target Start/End: Original strand, 18336469 - 18336589
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt--nnnnnnnngatttagattatgtctctgtaatttcaaattcttc 363  Q
    ||||||| ||||||| |||||| |||||||||| |||| ||||||||||||||||          |||||||||| |||| ||||||||||| |||||||    
T  18336469 gtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttc 18336568  T
Q  364 cactgttggtccctcatttca 384  Q
    | || ||| |||||| |||||    
T  18336569 cgcttttgatccctcctttca 18336589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 463
Target Start/End: Complemental strand, 30512405 - 30512361
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  30512405 aatgagggaccaaaagtggaaaaatctgaaattacagggaccaaa 30512361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 463
Target Start/End: Complemental strand, 30552745 - 30552701
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  30552745 aatgagggaccaaaagtggaaaaatctgaaattacagggaccaaa 30552701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 497
Target Start/End: Original strand, 27159148 - 27159191
Alignment:
Q  454 agggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||    
T  27159148 agggatcaaaagtgggaggaatctgaaattacagggacgtaatt 27159191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 459
Target Start/End: Complemental strand, 6817241 - 6817200
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||||||| ||||||||||||||| ||||    
T  6817241 aaatgagggaccaaaagtggaagaatctgaaattacatggac 6817200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 459
Target Start/End: Complemental strand, 20709331 - 20709290
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  20709331 aaatgagggaccaaaagtggaagaatttgaaattacagggac 20709290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 454
Target Start/End: Original strand, 20947056 - 20947097
Alignment:
Q  413 acgtaaaatgagggaccaaaagtggaggaatctgaaattaca 454  Q
    |||| ||||||| |||||||||||||||||||||||||||||    
T  20947056 acgtgaaatgagtgaccaaaagtggaggaatctgaaattaca 20947097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 459
Target Start/End: Original strand, 23979160 - 23979201
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  23979160 aaatgagggaccaaaagtggaagaatttgaaattacagggac 23979201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 4919108 - 4919068
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  4919108 aatgagggaccaaaagtggaagaatatgaaattacagggac 4919068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 27159104 - 27159068
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| ||||||||||||||||||||    
T  27159104 agggaccaaaagtggaagaatctgaaattacagggac 27159068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 31799754 - 31799718
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| ||||||||||||||||||||    
T  31799754 agggaccaaaagtggaagaatctgaaattacagggac 31799718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 459
Target Start/End: Original strand, 994003 - 994046
Alignment:
Q  416 taaaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||    
T  994003 taaaaggagggaccaaaagtggaagaatctgcaattacagggac 994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 402
Target Start/End: Original strand, 41424584 - 41424655
Alignment:
Q  331 tttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctg 402  Q
    |||||||| |||| |||| |||||| ||||||||||| || ||||||||||| | |||||||| | ||||||    
T  41424584 tttagattctgtccctgtcatttcagattcttccacttttagtccctcatttaaacatgtcagcaaaatctg 41424655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 384
Target Start/End: Complemental strand, 6817432 - 6817378
Alignment:
Q  330 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttca 384  Q
    ||||||||| |||| ||||||||||| ||||||||||| |||||| ||| |||||    
T  6817432 atttagattttgtccctgtaatttcatattcttccacttttggtcactcctttca 6817378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 456
Target Start/End: Complemental strand, 17762397 - 17762363
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagg 456  Q
    ||||||||||||||||| |||||||||||||||||    
T  17762397 gagggaccaaaagtggaagaatctgaaattacagg 17762363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 460
Target Start/End: Complemental strand, 20947053 - 20947011
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggacc 460  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||    
T  20947053 aaatgagggactaaaaatggaggaatctgaaattacagagacc 20947011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 24651075 - 24651025
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 316  Q
    ||||||||||||||| ||| ||||||||||||| |||| || |||||||||    
T  24651075 gtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtcc 24651025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 4919182 - 4919145
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcattt 382  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  4919182 ctgtaatttcaaattcctccacttttggtccctcattt 4919145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 7126109 - 7126072
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcattt 382  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  7126109 ctgtaatttcaaattcctccacttttggtccctcattt 7126072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 7126180 - 7126217
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  7126180 gagggaccaaaagtggaagaatatgaaattacagggac 7126217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 459
Target Start/End: Complemental strand, 14144020 - 14143979
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||| |||||||||||| |||| |||||||||||||||    
T  14144020 aaatgaggtaccaaaagtggaagaatatgaaattacagggac 14143979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 452
Target Start/End: Original strand, 17762542 - 17762575
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaatta 452  Q
    |||||||||||||||||||| |||||||||||||    
T  17762542 aatgagggaccaaaagtggaagaatctgaaatta 17762575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 459
Target Start/End: Original strand, 20959358 - 20959391
Alignment:
Q  426 gaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||||||||| |||||||    
T  20959358 gaccaaaagtggaggaatctgaaattgcagggac 20959391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 455
Target Start/End: Complemental strand, 22571196 - 22571159
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacag 455  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  22571196 aaatgagggaccaaaagtggaagaatatgaaattacag 22571159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 31800013 - 31799877
Alignment:
Q  268 aaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttccac 366  Q
    ||||||||||||| |||||| |||||||||| |||| || ||||||| |||||         |||||||||| ||||  |||||||||| |||||||| |    
T  31800013 aaatacctcttttcgtccctataatattagcgaattccggttttagt-cctgtaaaaaaaaagatttagattttgtccatgtaatttcagattcttcctc 31799915  T
Q  367 tgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    | ||| |||||| ||||| || ||||| ||||| ||||    
T  31799914 ttttgatccctcctttcatcacgtcagcagaatttgca 31799877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 41001616 - 41001653
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  41001616 gagggaccaaaagtggaagaatctgaaattatagggac 41001653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 459
Target Start/End: Complemental strand, 41424635 - 41424594
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||    
T  41424635 aaatgagggactaaaagtggaagaatctgaaatgacagggac 41424594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 993865 - 993825
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  993865 aatgagggaccaaaagtggaagaatatgaaattacaaggac 993825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 7126031 - 7125995
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  7126031 agggaccaaaagtggaagaatctgaaattatagggac 7125995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 14144088 - 14144124
Alignment:
Q  346 tgtaatttcaaattcttccactgttggtccctcattt 382  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  14144088 tgtaatttcaaattcctccacttttggtccctcattt 14144124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 14144165 - 14144201
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| |||| |||||||||||||||    
T  14144165 agggaccaaaagtggaagaatttgaaattacagggac 14144201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 454
Target Start/End: Complemental strand, 14411812 - 14411780
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattaca 454  Q
    ||||||||||||||||| |||||||||||||||    
T  14411812 gagggaccaaaagtggaagaatctgaaattaca 14411780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 14411926 - 14411966
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||| ||||| ||||||||||||||| ||||    
T  14411926 aatgagggaccaaacgtggaagaatctgaaattacaaggac 14411966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 490
Target Start/End: Complemental strand, 18336674 - 18336639
Alignment:
Q  454 agggaccaaaagtgggaggaatctgaaattacaggga 490  Q
    ||||||||||||||| |||||||||||||||||||||    
T  18336674 agggaccaaaagtgg-aggaatctgaaattacaggga 18336639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 18336720 - 18336756
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  18336720 agggatcaaaagtggaagaatctgaaattacagggac 18336756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 24837287 - 24837247
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  24837287 aatgagggaccaaaagtggaagaatatgaaattacaaggac 24837247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 29445070 - 29445106
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  29445070 agggaccaaaagtggaagaatctgaaattacaaggac 29445106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 41001471 - 41001431
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||| |||||||||||||| |||| |||||||||||||||    
T  41001471 aatgaaggaccaaaagtggaagaatatgaaattacagggac 41001431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 9e-65; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 276 - 497
Target Start/End: Original strand, 42510027 - 42510248
Alignment:
Q  276 ctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggtcc 375  Q
    |||||| |||||||||||||||| |||| || ||||| |||||||         ||||||||| |||| ||||||||||| ||||||||||| || ||||    
T  42510027 ctttttatccctgtaatattagcgaattccggttttaatccctgtaaaaaaataatttagattttgtccctgtaatttcatattcttccacttttagtcc 42510126  T
Q  376 ctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaat 475  Q
    ||||||||||||  |||| |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42510127 ctcatttcaccacatcagcagaatctgcatacatggcacgtgaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaat 42510226  T
Q  476 ctgaaattacagggatgtaatt 497  Q
    |||||||||||||| |||||||    
T  42510227 ctgaaattacaggggtgtaatt 42510248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 269 - 497
Target Start/End: Complemental strand, 20996040 - 20995813
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    |||||||||||||||||||||||||||||| |||||   ||||||||| |||        |||||||||| |||||||||||||||| |||||||||||     
T  20996040 aatacctctttttgtccctgtaatattagcgaattttagttttagtccatgtaaaaaaaagatttagattttgtctctgtaatttcatattcttccactt 20995941  T
Q  369 ttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgg 468  Q
    ||||||||| ||| ||||| ||||| |||||||||| ||||| |||||||| ||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  20995940 ttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaa-tgagggaccaaaagtggagaaatttgaaattacagggacgaaaagtgg 20995842  T
Q  469 gaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||||| ||||||    
T  20995841 gaggaatctgaaattacagggacgtaatt 20995813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 266 - 501
Target Start/End: Original strand, 39826052 - 39826288
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| |||| | |||||||||| |||||||||||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  39826052 gtaaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcc 39826151  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||| ||||||||| ||||| || || |||||||||| ||||| |||||||||||||||| ||||||||||||||| |||||||||||||| |||||    
T  39826152 acttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatatgaaattacagggatcaaaa 39826251  T
Q  465 gtgggaggaatctgaaattacagggatgtaattgatg 501  Q
    ||||||||||||| |||||||| ||| ||||||||||    
T  39826252 gtgggaggaatctaaaattacaaggacgtaattgatg 39826288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 258 - 497
Target Start/End: Complemental strand, 48072345 - 48072105
Alignment:
Q  258 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaa 356  Q
    ||||||| ||||||||||||||| |||  |||||||||||  |||| || ||||||||| |||          |||||||||||||| |||||||||||     
T  48072345 tttttagggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtccttgtaaaaaaaaatatttagattatgtccctgtaatttcat 48072246  T
Q  357 attcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagg 456  Q
    ||||||||||| ||||  ||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48072245 attcttccacttttgggtcctcatttcaccacgtcagcagaatctgcatacatgtcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagg 48072146  T
Q  457 gaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    || |||||||||||||||| |||||||||||||| ||||||    
T  48072145 gatcaaaagtgggaggaatttgaaattacagggacgtaatt 48072105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 269 - 497
Target Start/End: Complemental strand, 17606679 - 17606452
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactg 368  Q
    |||||||||||| ||||||||||||||||| |||| || |||||||||||||        |||||||||| ||||  |||||||||| |||||||||||     
T  17606679 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaa-gatttagattttgtccttgtaatttcagattcttccactt 17606581  T
Q  369 ttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgg 468  Q
    ||||||||| ||| ||||| ||||| | ||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17606580 ttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaagtgg 17606481  T
Q  469 gaggaatctgaaattacagggatgtaatt 497  Q
    ||||||| |||||||||||||| ||||||    
T  17606480 gaggaatatgaaattacagggacgtaatt 17606452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 266 - 497
Target Start/End: Complemental strand, 30299607 - 30299375
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    |||||||||| |||| ||| ||||||||||||||||||||| ||||||| |||||         |||||||||| |||| ||||||||| | ||||||||    
T  30299607 gtaaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgtaaaaaaaaagatttagattttgtccctgtaattttagattcttcc 30299508  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||||||||||||| ||||| || || |||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| | || ||||    
T  30299507 acttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaaaagtggaggaatctgaaattacaagaactaaaa 30299408  T
Q  465 gtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||||||||| ||||||    
T  30299407 gtgggaggaatctgaaattacagggacgtaatt 30299375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 266 - 497
Target Start/End: Original strand, 4906964 - 4907196
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||  ||||    |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  4906964 gtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattcttcc 4907063  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||||||||||||| ||||| |||||  ||||||||| ||||| || |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  4907064 acttttggtccctcattccaccacgtcagccgaatctgcatacatggcatgtaaaatgagggactaaaagtggatgaatctgaaattacagggaccaaaa 4907163  T
Q  465 gtgggaggaatctgaaattacagggatgtaatt 497  Q
    || ||||||||||||||||||||||| ||||||    
T  4907164 gtaggaggaatctgaaattacagggacgtaatt 4907196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 266 - 497
Target Start/End: Complemental strand, 39711448 - 39711216
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| ||||  | |||||||||||||         |||||||||| |||| | ||||||||| ||||||||    
T  39711448 gtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattcttcc 39711349  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||||||||||||| ||||| || || ||||| |||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39711348 acttttggtccctcattccaccacgtaagcagaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatccgaaattacagggaccaaaa 39711249  T
Q  465 gtgggaggaatctgaaattacagggatgtaatt 497  Q
    | ||||||||| |||||||||| ||| ||||||    
T  39711248 gcgggaggaatatgaaattacaaggacgtaatt 39711216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 329 - 497
Target Start/End: Original strand, 52058077 - 52058245
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||| |||||| ||||||||||| ||||||||||| |||||||||||||||||||  |||| |||||||||| |||||||||||||||||||||||    
T  52058077 gatttagactatgtccctgtaatttcagattcttccacttttggtccctcatttcaccacatcagcagaatctgcatacatgacacgtaaaatgagggac 52058176  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| | ||||| ||||||    
T  52058177 caaaagtggagtaatatgaaattacaaggaccaaaagtgggaggaatctgaaatcatagggacgtaatt 52058245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 329 - 486
Target Start/End: Complemental strand, 24467939 - 24467783
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| |||| ||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| ||||    
T  24467939 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatga-ggac 24467841  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattaca 486  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  24467840 caaatgtggagtaatctgaaattacagggaccaaaagtgggaggaatatgaaattaca 24467783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 260 - 490
Target Start/End: Original strand, 33628686 - 33628917
Alignment:
Q  260 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaat 358  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||  | |||||||||| ||         |||||||||| |||| | ||||||||| ||    
T  33628686 tttagggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaatttcagat 33628785  T
Q  359 tcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 458  Q
    |||| |||| ||||||||||||| |||||  | || ||||| |||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  33628786 tctttcacttttggtccctcattccaccacataagcagaatttgcatacatggcacgtaaaatgagggaccaaaagtagaggaatctgaaattacaggga 33628885  T
Q  459 ccaaaagtgggaggaatctgaaattacaggga 490  Q
    ||||||| ||||||||| ||||||||||||||    
T  33628886 ccaaaagcgggaggaatttgaaattacaggga 33628917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 332 - 497
Target Start/End: Complemental strand, 13230040 - 13229876
Alignment:
Q  332 ttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaa 431  Q
    ||||||| || |||| ||||||||  |||||||||| ||||||||||||| ||||| || || |||||||||| |||||||||| |||||||||||||||    
T  13230040 ttagattttgcctctttaatttcatcttcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgcaaaatgagggaccaa 13229941  T
Q  432 aagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  13229940 aagtggaggaatctgaaattaca-ggaccaaaagtgagaggaatctgaaattacagggacgtaatt 13229876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 266 - 490
Target Start/End: Original strand, 39970647 - 39970872
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttc 363  Q
    ||||||||||||||| |||| |||||||||| | |||||| |||||| || ||||          |||||||||| ||||| |||||||||| |||||||    
T  39970647 gtaaatacctcttttcgtccatgtaatattaacgaatttcaattttaatctctgtaaaaaaaaaagatttagattttgtctatgtaatttcagattcttc 39970746  T
Q  364 cactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaa 463  Q
    |||| ||||||||||||| ||||| ||||| | |||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  39970747 cacttttggtccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaaaagtggatgaatctgaaattaca-tgaccaaa 39970845  T
Q  464 agtgggaggaatctgaaattacaggga 490  Q
    |||||||||||||| ||||| ||||||    
T  39970846 agtgggaggaatctaaaatttcaggga 39970872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 346 - 497
Target Start/End: Complemental strand, 43539642 - 43539491
Alignment:
Q  346 tgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatct 445  Q
    |||||||||||||||||||| | ||||||||| ||| ||||| |||||  ||||||||| |||||||||||||||||||| ||||||||||||||||| |    
T  43539642 tgtaatttcaaattcttccagttttggtcccttattccaccacgtcagccgaatctgcatacatgacacgtaaaatgaggtaccaaaagtggaggaattt 43539543  T
Q  446 gaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  43539542 gaaattacagggagcaaaagtgggaggaatctaaaattacagggacgtaatt 43539491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 333 - 473
Target Start/End: Original strand, 7473862 - 7474002
Alignment:
Q  333 tagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaa 432  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||  |||||||||| ||||| ||||| |||||| ||| ||||    
T  7473862 tagattatgtctctgtaatttcatattcttccacttttggtccctcatttcaccacgtcaaaagaatctgcatacatggcacgtgaaatgatggatcaaa 7473961  T
Q  433 agtggaggaatctgaaattacagggaccaaaagtgggagga 473  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  7473962 agtggaggaatctgaaattacaaggaccaaaagtgggagga 7474002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 329 - 497
Target Start/End: Complemental strand, 8293119 - 8292948
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| |||| ||||||||||| ||||||||||| ||||||||||||| |||||||||||  ||||||||| ||||| || | ||||||||||||    
T  8293119 gatttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccatgtcagccgaatctgcatacatggcatgaaaaatgagggac 8293020  T
Q  429 ca---aaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
     |   ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||    
T  8293019 taattaaagtggaggaatctaaaattacatggaccaaaagtaggaggaatctgaaattacagggacgtaatt 8292948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 266 - 458
Target Start/End: Original strand, 34749140 - 34749332
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    |||||||| ||||||  |||||||||||||||| ||||  ||||||||||||| |        |||||||||| |||| | ||||||||| |||||||||    
T  34749140 gtaaatacatcttttcatccctgtaatattagcgaattctgattttagtccctataaaaaaaagatttagattttgtccccgtaatttcatattcttcca 34749239  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 458  Q
    || ||||||||||||| ||||| || || ||||| |||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  34749240 cttttggtccctcattccaccacgtaagcagaatttgcatacatggcatgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 34749332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 268 - 486
Target Start/End: Complemental strand, 18462658 - 18462440
Alignment:
Q  268 aaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttccac 366  Q
    |||||||||||||  ||||||||||||||||||||| || ||||||| | |||         |||||||||| |||| | ||||||||| ||||||||||    
T  18462658 aaatacctcttttcctccctgtaatattagcaaattccggttttagttcttgtataaaaaaagatttagattttgtccccgtaatttcagattcttccac 18462559  T
Q  367 tgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagt 466  Q
    | |||||| |||||||||||| ||||  |||||||||| ||||| |||| ||||||| |||||||| |||||| ||| |||||||| |||||||||||||    
T  18462558 ttttggtctctcatttcaccacgtcaacagaatctgcatacatggcacgcaaaatga-ggaccaaacgtggagtaatatgaaattatagggaccaaaagt 18462460  T
Q  467 gggaggaatctgaaattaca 486  Q
    ||||||||| ||||||||||    
T  18462459 gggaggaatatgaaattaca 18462440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 266 - 490
Target Start/End: Complemental strand, 29696933 - 29696715
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||   |||||||||||| |||| || |||||||| ||||         | ||||||| ||||  |||||||||| |||||||||    
T  29696933 gtaaatacctcttttcgtttatgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaattagattttgtccatgtaatttcagattcttcca 29696834  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || ||||||||||||| ||||| || || ||||||||||    || |||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  29696833 cttttggtccctcattccaccacgtaagcagaatctgca----tg-cacgtaaaatgagggaccaaaagtggaggaatctgaaaatacagggacc-aaag 29696740  T
Q  466 tgggaggaatctgaaattacaggga 490  Q
    |||||||||| |||||||| |||||    
T  29696739 tgggaggaatatgaaattataggga 29696715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 18462288 - 18462426
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||        |||||||||| |||| ||||||||||| |||||||||    
T  18462288 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 18462387  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
     | |||||||||| ||||| || |||| |||||||||||    
T  18462388 tttttggtccctcctttcatcaagtcattagaatctgca 18462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 24467631 - 24467769
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    |||||||| |||||| ||||||||||||||||| |||| | ||||||||||||||        |||||||||| |||| ||||||||||| |||||||||    
T  24467631 gtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 24467730  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || |||||||||| ||||| || |||| |||||||||||    
T  24467731 cttttggtccctcctttcatcaagtcattagaatctgca 24467769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 267 - 402
Target Start/End: Original strand, 17606307 - 17606447
Alignment:
Q  267 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-----nnnnnnnngatttagattatgtctctgtaatttcaaattct 361  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||             |||||||||| |||  ||||||||||| |||||    
T  17606307 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaaaagatttagattttgttcctgtaatttcatattct 17606406  T
Q  362 tccactgttggtccctcatttcaccatgtcagtagaatctg 402  Q
    |||||| |||||||||||||||| || ||||| ||||||||    
T  17606407 tccacttttggtccctcatttcatcacgtcagcagaatctg 17606447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 266 - 393
Target Start/End: Complemental strand, 52058384 - 52058256
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| ||||| | ||||||| |||||         ||||||||||||||| ||||||||||| ||||||||    
T  52058384 gtaaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgtagaaaaaaagatttagattatgtccctgtaatttcagattcttcc 52058285  T
Q  365 actgttggtccctcatttcaccatgtcag 393  Q
    ||| |||||||||| ||||| || |||||    
T  52058284 acttttggtccctcctttcatcacgtcag 52058256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 215044 - 215135
Alignment:
Q  395 agaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattaca 486  Q
    |||||||||| | ||||||||| ||||||  |||||||||||||||||||| |||||||| ||||| |||||| ||| ||||||||||||||    
T  215044 agaatctgcatatatgacacgtgaaatgaatgaccaaaagtggaggaatcttaaattacacggaccgaaagtgagagaaatctgaaattaca 215135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 404
Target Start/End: Complemental strand, 4907274 - 4907199
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||||| |||| ||||||||||| ||||||||||| |||||||||| ||||| || ||||||||||||||||    
T  4907274 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacgtcagtagaatctgca 4907199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 266 - 384
Target Start/End: Original strand, 29696567 - 29696685
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||        |||||||||| |||| | ||||||||| |||||||||    
T  29696567 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaagatttagattttgtccccgtaatttcatattcttcca 29696666  T
Q  366 ctgttggtccctcatttca 384  Q
    || || ||| ||| |||||    
T  29696667 ctttttgtcactcctttca 29696685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 39711076 - 39711213
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| |||  |||||||||||| |||| || |||||||||||||        |||||||||| ||||  |||||||||| |||||||||    
T  39711076 gtaaatacctcttttcgtct-tgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccttgtaatttcatattcttcca 39711174  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || |||||||||| ||| | || ||||| ||||||||||    
T  39711175 cttttggtccctcctttaatcacgtcagcagaatctgca 39711213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 266 - 375
Target Start/End: Complemental strand, 39826422 - 39826312
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| |||| |||||||||||| ||||||| |||||||||||||         |||||||||| |||| ||||||||||| ||||||||    
T  39826422 gtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcc 39826323  T
Q  365 actgttggtcc 375  Q
    ||| |||||||    
T  39826322 acttttggtcc 39826312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 266 - 401
Target Start/End: Original strand, 30299234 - 30299369
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| || |||||||||||| |||||         |||||||||| |||| ||||||||||| ||||||||    
T  30299234 gtaaatacctcttttcgtccctgtaatattagcgaacttcgattttagt-cctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 30299332  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatct 401  Q
    ||| |||||| ||| ||||| || ||||  |||||||    
T  30299333 acttttggtctctcctttcatcaagtcaacagaatct 30299369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 287 - 401
Target Start/End: Complemental strand, 16294302 - 16294187
Alignment:
Q  287 tgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcac 385  Q
    ||||||||||||||||||||||||||||||||||          ||||||||| ||||  |||||||||| |||| |||||| ||||||||| |||| ||    
T  16294302 tgtaatattagcaaatttcgattttagtccctgtaaaataaaaaatttagattttgtccttgtaatttcatattcctccacttttggtcccttatttaac 16294203  T
Q  386 catgtcagtagaatct 401  Q
    |||||||| |||||||    
T  16294202 catgtcagcagaatct 16294187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 266 - 404
Target Start/End: Complemental strand, 34749481 - 34749342
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||||||| ||||||||||| | |||| |||||||||||| |||         |||||||||| | || ||||||||||| ||||||||    
T  34749481 gtaaatacctctttttgtctctgtaatattatcgaattccgattttagtccttgtaaaaaaaaagatttagattttatccctgtaatttcagattcttcc 34749382  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| ||||| |||| ||| | || ||||| ||||||||||    
T  34749381 acttttggtacctcctttaatcacgtcagcagaatctgca 34749342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 262 - 404
Target Start/End: Original strand, 43539345 - 43539488
Alignment:
Q  262 tagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattc 360  Q
    ||||||||||| |||||||  ||| ||||| ||||||||||| |||||||||||| |||         |||||||||| |||| ||||||||| | |||     
T  43539345 tagagtaaatatctcttttcatccatgtaagattagcaaattccgattttagtccttgtaaaaaaaacgatttagattttgtccctgtaattttatattg 43539444  T
Q  361 ttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||||||| |||||||||| ||||| || ||||| ||||||||||    
T  43539445 ttccacttttggtccctcctttcatcacgtcagcagaatctgca 43539488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 401
Target Start/End: Complemental strand, 33629063 - 33628930
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttccact 367  Q
    |||||||||||||||||||||||||||||| |||| || |||||||||||||          | || |||| |||| ||||||||||| |||||||||||    
T  33629063 aatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaatttgattttgtccctgtaatttcagattcttccact 33628964  T
Q  368 gttggtccctcatttcaccatgtcagtagaatct 401  Q
     |||||||||| ||| | || ||||| |||||||    
T  33628963 tttggtccctcctttaatcacgtcagcagaatct 33628930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 8292806 - 8292945
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||| ||||||| ||||||||| ||||||| |||  || |||||||||||||         |||||||||| |||| ||| ||||||| ||||||||    
T  8292806 gtaaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgtaaaataaaagatttagattttgtccctgaaatttcatattcttcc 8292905  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| ||||| |||| ||||| || ||||| ||||||||||    
T  8292906 acttttggttcctcttttcatcacgtcagcagaatctgca 8292945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 18342393 - 18342339
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    |||||||||| |||| ||||||||||||||||| ||||||| |||||||||||||    
T  18342393 gtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgt 18342339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 459
Target Start/End: Original strand, 24467886 - 24467927
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  24467886 aaatgagggaccaaaagtggaagaatctgaaattacagggac 24467927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 400
Target Start/End: Complemental strand, 39971022 - 39970886
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt--nnnnnnnngatttagattatgtctctgtaatttcaaattcttc 363  Q
    ||||||||||||||| |||| |||||||||| | ||||||| |||||||||||||          |||||||||| |||| ||||||||| | || ||||    
T  39971022 gtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattttagatccttc 39970923  T
Q  364 cactgttggtccctcatttcaccatgtcagtagaatc 400  Q
    |||| |||||||||  ||||| || ||||| ||||||    
T  39970922 cacttttggtcccttctttcatcacgtcagcagaatc 39970886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 459
Target Start/End: Complemental strand, 52058130 - 52058089
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  52058130 aaatgagggaccaaaagtggaagaatctgaaattacagggac 52058089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 406
Target Start/End: Complemental strand, 17502040 - 17501965
Alignment:
Q  331 tttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcaca 406  Q
    |||||||| |||| ||||||||||| |||| |||||| || ||||||| ||| ||| |||||| ||||||||||||    
T  17502040 tttagattctgtccctgtaatttcagattcctccacttttagtccctcgtttaaccctgtcagcagaatctgcaca 17501965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 497
Target Start/End: Original strand, 34749297 - 34749339
Alignment:
Q  454 agggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  34749297 agggaccaaaagtgg-aggaatctgaaattacagggatgtaatt 34749339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 4907225 - 4907262
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  4907225 gagggaccaaaagtggaagaatctgaaattacagggac 4907262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 17501993 - 17502030
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  17501993 gagggactaaaagtggaggaatctgaaattacagggac 17502030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 24467743 - 24467706
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  24467743 gagggaccaaaagtggaagaatctgaaattacagggac 24467706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 33628953 - 33628990
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  33628953 gagggaccaaaagtggaagaatctgaaattacagggac 33628990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 52058271 - 52058308
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  52058271 gagggaccaaaagtggaagaatctgaaattacagggac 52058308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 4907080 - 4907040
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  4907080 aatgagggaccaaaagtggaagaatatgaaattacagggac 4907040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 8293067 - 8293107
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  8293067 aatgagggaccaaaagtggaagaatatgaaattacagggac 8293107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 29696818 - 29696858
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  29696818 aatgagggaccaaaagtggaagaatctgaaattacatggac 29696858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 30299491 - 30299531
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  30299491 aatgagggaccaaaagtggaagaatctaaaattacagggac 30299531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 39826168 - 39826128
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  39826168 aatgagggatcaaaagtggaagaatctgaaattacagggac 39826128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 454
Target Start/End: Complemental strand, 39970764 - 39970729
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattaca 454  Q
    |||||||||||||||||||| |||||||||||||||    
T  39970764 aatgagggaccaaaagtggaagaatctgaaattaca 39970729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 320
Target Start/End: Complemental strand, 43539720 - 43539669
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    |||| ||||||| |||||||||||||||||||||| || ||||||| |||||    
T  43539720 aatagctcttttcgtccctgtaatattagcaaattccggttttagttcctgt 43539669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 314
Target Start/End: Original strand, 16294045 - 16294099
Alignment:
Q  260 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagt 314  Q
    ||||| || ||||||  |||| ||||||||||||||||| |||||||||||||||    
T  16294045 tttagggttaataccgattttggtccctgtaatattagcgaatttcgattttagt 16294099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 456
Target Start/End: Complemental strand, 17606427 - 17606389
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagg 456  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  17606427 aaatgagggaccaaaagtggaagaatatgaaattacagg 17606389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 20995700 - 20995754
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    |||||||||||||||  || ||||||||||||| |||| || |||||||||||||    
T  20995700 gtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccctgt 20995754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 459
Target Start/End: Original strand, 39826312 - 39826346
Alignment:
Q  425 ggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||| ||||||||||||||||||||    
T  39826312 ggaccaaaagtggaagaatctgaaattacagggac 39826346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 455
Target Start/End: Complemental strand, 7473911 - 7473874
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacag 455  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  7473911 aaatgagggaccaaaagtggaagaatatgaaattacag 7473874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 13230108 - 13230059
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtc 315  Q
    ||||||||||||||| ||| ||| ||||||||| ||||||| ||||||||    
T  13230108 gtaaatacctcttttcgtctctgaaatattagcgaatttcggttttagtc 13230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 459
Target Start/End: Original strand, 16294206 - 16294247
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||| ||||||||||||||||||||| |||||||||| ||||    
T  16294206 aaataagggaccaaaagtggaggaatatgaaattacaaggac 16294247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 17606494 - 17606531
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcattt 382  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  17606494 ctgtaatttcaaattcctccacttttggtccctcattt 17606531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 18462400 - 18462363
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  18462400 gagggaccaaaaatggaagaatctgaaattacagggac 18462363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 459
Target Start/End: Original strand, 18462543 - 18462584
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||| ||||||||||||| |||||||||||||| |||||    
T  18462543 aaatgagagaccaaaagtggaagaatctgaaattacggggac 18462584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 459
Target Start/End: Complemental strand, 42510133 - 42510092
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||| ||||||||| |||| |||||||||||||||    
T  42510133 aaatgagggactaaaagtggaagaatatgaaattacagggac 42510092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 17606572 - 17606608
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  17606572 agggaccaaaagtggaagaatctgaaattacaaggac 17606608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 33628808 - 33628768
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||| | |||||||||||||| |||||    
T  33628808 aatgagggaccaaaagtgaaagaatctgaaattacggggac 33628768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 34749255 - 34749215
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| ||||||||| |||||    
T  34749255 aatgagggaccaaaagtggaagaatatgaaattacggggac 34749215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 458
Target Start/End: Original strand, 34749368 - 34749404
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacaggga 458  Q
    |||| |||||||||||| |||||||||||||||||||    
T  34749368 gaggtaccaaaagtggaagaatctgaaattacaggga 34749404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 39711332 - 39711372
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| ||||||||| |||||    
T  39711332 aatgagggaccaaaagtggaagaatatgaaattacggggac 39711372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 42510206 - 42510166
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcatttcac 385  Q
    ||||||||||| |||| |||||| |||||||||||||||||    
T  42510206 ctgtaatttcagattcctccacttttggtccctcatttcac 42510166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 1e-60; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 266 - 490
Target Start/End: Original strand, 18500317 - 18500542
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| |||||| |||||||||| ||||||| |||||||||||||        |||||||||| |||| ||||||||||| |||||||||    
T  18500317 gtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgtaagaaaaagatttagattttgtccctgtaatttcatattcttcca 18500416  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatct-gaaattacagggaccaaaa 464  Q
    || ||||||||||||| ||||| || || |||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  18500417 cttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctaaaaattacagggaccaaaa 18500516  T
Q  465 gtgggaggaatct-gaaattacaggga 490  Q
    || ||||||||||  ||||||||||||    
T  18500517 gt-ggaggaatctaaaaattacaggga 18500542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 266 - 497
Target Start/End: Complemental strand, 24732313 - 24732082
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| |||| | |||| |||||||||         |||||||||| ||||  |||||||||| ||||||||    
T  24732313 gtaaatacctcttttcgtccctgtaatattagcgaattccaattt-agtccctgtaaaaaaaaagatttagattttgtccatgtaatttcatattcttcc 24732215  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||||||||||||| ||||| || || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24732214 acttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattatagggaccaaaa 24732115  T
Q  465 gtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||||| ||| ||||||    
T  24732114 gtgggaggaatctgaaattacaaggacgtaatt 24732082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 266 - 490
Target Start/End: Original strand, 26385280 - 26385505
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||| ||||||||||||| ||||  | ||||||||| |||         |||||||||| |||| ||||||||| | ||||||||    
T  26385280 gtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgtagaaaaaaagatttagattttgtccctgtaattttatattcttcc 26385379  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| ||||||||||||| ||||| || || |||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26385380 acttttggtccctcattccaccacgtaagcagaatctgtatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 26385479  T
Q  465 gtgggaggaatctgaaattacaggga 490  Q
     |||||||||| ||||||||||||||    
T  26385480 ctgggaggaatatgaaattacaggga 26385505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 329 - 497
Target Start/End: Original strand, 33714553 - 33714721
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| ||||  |||||||||| ||||||||||| ||||||||||||| ||||| || || |||||||||| |||||  ||||||||||||||||    
T  33714553 gatttagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggac 33714652  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||||||    
T  33714653 caaaagtggaggaatctgaaattacagagaccaaaagtgagaggaatctgaaattacaaggacgtaatt 33714721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 330 - 496
Target Start/End: Original strand, 14680949 - 14681115
Alignment:
Q  330 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggacc 429  Q
    ||||||||| ||||| |||||||||| ||||||||||| ||||||| ||||||||||| ||||| |||||||||| ||||||||||| ||| ||| ||||    
T  14680949 atttagattttgtctttgtaatttcatattcttccacttttggtccttcatttcaccacgtcagcagaatctgcatacatgacacgtgaaaagagagacc 14681048  T
Q  430 aaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaat 496  Q
    |||||||||| |||||||||||| | |||||||||||| ||| |||||||||||||||||| |||||    
T  14681049 aaaagtggagaaatctgaaattatatggaccaaaagtgagagtaatctgaaattacagggacgtaat 14681115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 267 - 497
Target Start/End: Original strand, 30458903 - 30459135
Alignment:
Q  267 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn--gatttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||| |||||| ||||||||||||||||  ||||||| ||||||| || ||          ||||||||||||||| ||||||||||| |||||||     
T  30458903 taaatacatcttttcgtccctgtaatattagtgaatttcggttttagttcccgtaaaaaaaaaagatttagattatgtcactgtaatttcagattcttca 30459002  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 464  Q
    ||| || ||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| || |||||||| |  |||||||||||||| |||||||||    
T  30459003 acttttagtctctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgagagatcaaaagtgaaataatctgaaattacaaggaccaaaa 30459102  T
Q  465 gtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||| |||||||| ||||| ||||||    
T  30459103 gtgggaggaatttgaaattatagggacgtaatt 30459135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 330 - 497
Target Start/End: Complemental strand, 30618272 - 30618106
Alignment:
Q  330 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggacc 429  Q
    ||||||||| |||| ||||||||| | ||||||||||| || ||| || ||| ||||| ||||| ||||||| || ||||| ||||||||||||||||||    
T  30618272 atttagattttgtccctgtaattttagattcttccactttttgtctcttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggacc 30618173  T
Q  430 aaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||| ||||||    
T  30618172 aaaagtggaggaatttgaaattacagtgatcaaaagtggga-gaatctgaaattacagggacgtaatt 30618106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 329 - 497
Target Start/End: Complemental strand, 9481494 - 9481326
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| ||||  |||||||||| ||||||||||| ||||||||| ||| ||||| ||||| | ||| |||| ||||| |||| ||||||||||||    
T  9481494 gatttagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgcaaaatgagggac 9481395  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
     |||| ||||||||| |||||||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  9481394 aaaaaatggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacaggaacgtaatt 9481326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 274 - 458
Target Start/End: Original strand, 32017550 - 32017731
Alignment:
Q  274 ctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccactgttggt 373  Q
    |||||||||||| ||| |||||||| |||||||||||||||| ||||         ||||||||| ||| |  ||||||||| ||||||||||| |||||    
T  32017550 ctctttttgtccatgtgatattagcgaatttcgattttagtctctgtaaaaaaac-atttagattttgttt--gtaatttcagattcttccacttttggt 32017646  T
Q  374 ccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 458  Q
    || | ||| ||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32017647 cctttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattacaggga 32017731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 345 - 497
Target Start/End: Original strand, 2299393 - 2299543
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatc 444  Q
    |||||||||||| |||||||||| || |||||||||| ||||| || || ||||| || | ||||| |||||||||||||||||||||||||| ||||||    
T  2299393 ctgtaatttcaa-ttcttccacttttagtccctcattccaccacgtaagcagaatatgtatacatggcacgtaaaatgagggaccaaaagtggcggaatc 2299491  T
Q  445 tgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    | |||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  2299492 taaaattacaaggaccaaaagtgggaggaatctgaaa-tacagggacgtaatt 2299543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 268 - 497
Target Start/End: Original strand, 10321737 - 10321965
Alignment:
Q  268 aaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttccact 367  Q
    |||||| |||||| ||||||||||||||||| |||| || ||||||||||||            ||||||||| || ||||||||||| |||||| ||||    
T  10321737 aaatacttcttttcgtccctgtaatattagcgaattccggttttagtccctgaaaaaaaata--ttagattatatccctgtaatttcatattcttacact 10321834  T
Q  368 gttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac-caaaagtggaggaatctgaaattacagggaccaaaagt 466  Q
     ||| ||||||||||||||| ||||| || ||||||| ||||| |||||||||| |||| |  |||| ||||| |||||||||||||| | |||||||||    
T  10321835 tttgctccctcatttcaccacgtcagcagtatctgcatacatggcacgtaaaataaggggctaaaaattggagtaatctgaaattacatgaaccaaaagt 10321934  T
Q  467 gggaggaatctgaaattacagggatgtaatt 497  Q
    |||||||||||||||||||| ||| ||||||    
T  10321935 gggaggaatctgaaattacaaggacgtaatt 10321965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 340 - 459
Target Start/End: Complemental strand, 33637829 - 33637709
Alignment:
Q  340 tgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagt-gga 438  Q
    |||| ||||||||||| |||||| |||| ||| ||||||||| ||||| ||||| |||||||||| |||| ||||||||||||||||||||||||| |||    
T  33637829 tgtccctgtaatttcatattctttcacttttgatccctcattccaccacgtcagcagaatctgcatacataacacgtaaaatgagggaccaaaagtggga 33637730  T
Q  439 ggaatctgaaattacagggac 459  Q
    |||||||||||||||||||||    
T  33637729 ggaatctgaaattacagggac 33637709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 395 - 490
Target Start/End: Original strand, 3229995 - 3230090
Alignment:
Q  395 agaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaggga 490  Q
    |||||||||| |||||| || |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||    
T  3229995 agaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacaggga 3230090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 423 - 490
Target Start/End: Original strand, 17142798 - 17142865
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaggga 490  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17142798 agggaccaaaagtggaggaatctgaaattacagggaccaaaagtgagaggaatctgaaattacaggga 17142865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 9481184 - 9481323
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnng-atttagattatgtctctgtaatttcaaattcttcc 364  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||        | |||||||||||||| ||||||||||| ||||||||    
T  9481184 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattcttcc 9481283  T
Q  365 actgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    | | |||||||||| ||||| || ||||| ||||||||||    
T  9481284 aattttggtccctcctttcatcacgtcagcagaatctgca 9481323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 266 - 393
Target Start/End: Complemental strand, 32017879 - 32017752
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||| ||||||| ||||||||||||||||| |||| || |||||||||||||        |||||||||| |||| ||||||||||| |||||||||    
T  32017879 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 32017780  T
Q  366 ctgttggtccctcatttcaccatgtcag 393  Q
    || |||||||||| ||||| || |||||    
T  32017779 cttttggtccctcctttcatcacgtcag 32017752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 410
Target Start/End: Complemental strand, 9854198 - 9854118
Alignment:
Q  330 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatg 410  Q
    ||||||||| ||||  |||||||||| ||||||||||| ||||||||||||||||||| ||||| | |||||||| |||||    
T  9854198 atttagattttgtccttgtaatttcatattcttccacttttggtccctcatttcaccacgtcagcaaaatctgcatacatg 9854118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 423 - 490
Target Start/End: Original strand, 18500506 - 18500574
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaa-ttacagggaccaaaagtgggaggaatctgaaattacaggga 490  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||| | | |||||||||||||||||    
T  18500506 agggaccaaaagtggaggaatctaaaaattacagggaccaaaagtggaaaggatctgaaattacaggga 18500574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 26385649 - 26385596
Alignment:
Q  267 taaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgt 26385596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 392
Target Start/End: Original strand, 19284195 - 19284258
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtca 392  Q
    |||||||||| |||| ||||||||||| ||||||||||| |||||||||| ||||| |||||||    
T  19284195 gatttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcatgtca 19284258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 384
Target Start/End: Original strand, 17142744 - 17142798
Alignment:
Q  330 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttca 384  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| ||| |||||    
T  17142744 atttagattatgtccctgtaatttcaaattcttccacttttggtctctcgtttca 17142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 18500705 - 18500655
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 316  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  18500705 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 24731937 - 24731991
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||||||    
T  24731937 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 24731991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 454 - 496
Target Start/End: Complemental strand, 33637746 - 33637704
Alignment:
Q  454 agggaccaaaagtgggaggaatctgaaattacagggatgtaat 496  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  33637746 agggaccaaaagtgggaggaatctgaaattacagggacgtaat 33637704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 404
Target Start/End: Original strand, 30617969 - 30618103
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||||| ||||||||||||||||  ||||  ||||||||||| |           ||||||||| |||| ||||||||||| ||| |||||    
T  30617969 gtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtcctt----taaaaaaatttagattttgtccctgtaatttcatattgttcca 30618064  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    || |||||||||| ||| | || ||||| ||||||||||    
T  30618065 cttttggtccctccttttatcacgtcagcagaatctgca 30618103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 19284244 - 19284207
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  19284244 gagggaccaaaagtggaagaatctgaaattacagggac 19284207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 10322036 - 10321968
Alignment:
Q  336 attatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    |||||||| ||||||||||| |||||| |||| ||||||| || ||||| || ||||| ||||||||||    
T  10322036 attatgtccctgtaatttcagattctttcacttttggtccttcctttcatcacgtcagcagaatctgca 10321968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 18500432 - 18500392
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  18500432 aatgagggaccaaaagtggaagaatatgaaattacagggac 18500392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 497
Target Start/End: Original strand, 32017696 - 32017738
Alignment:
Q  454 agggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  32017696 agggaccaaaagtgg-aggaatttgaaattacagggatgtaatt 32017738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 2299697 - 2299635
Alignment:
Q  258 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||||| ||||||| ||||||| || |||||||||||||| |||| || ||||||| |||||    
T  2299697 tttttagggtaaatatctcttttcgttcctgtaatattagcgaattccggttttagttcctgt 2299635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 365
Target Start/End: Original strand, 9154884 - 9154982
Alignment:
Q  269 aatacctctttttgtccctgtaata-ttagcaaatttcgattttagtccctgt-nnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    ||||||||||||  ||||||||||| ||||| |||| ||||||||||||||||         |||||||||| |||| ||||||||||| |||||||||    
T  9154884 aatacctcttttcctccctgtaatatttagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 9154982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 460
Target Start/End: Original strand, 17142829 - 17142867
Alignment:
Q  423 agggaccaaaagtg-gaggaatctgaaattacagggacc 460  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  17142829 agggaccaaaagtgagaggaatctgaaattacagggacc 17142867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 299
Target Start/End: Original strand, 3229962 - 3229995
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagca 299  Q
    ||||||| ||||||||||||||||||||||||||    
T  3229962 gtaaatatctctttttgtccctgtaatattagca 3229995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 459
Target Start/End: Original strand, 9854146 - 9854187
Alignment:
Q  418 aaatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||||||| |||| |||||||||| ||||    
T  9854146 aaatgagggaccaaaagtggaagaatatgaaattacaaggac 9854187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 367
Target Start/End: Complemental strand, 15942447 - 15942410
Alignment:
Q  330 atttagattatgtctctgtaatttcaaattcttccact 367  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  15942447 atttagattatgtctctataatttcatattcttccact 15942410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 490
Target Start/End: Original strand, 17142797 - 17142833
Alignment:
Q  453 cagggaccaaaagtgggaggaatctgaaattacaggga 490  Q
    |||||||||||||| |||||||||||||||||||||||    
T  17142797 cagggaccaaaagt-ggaggaatctgaaattacaggga 17142833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 24732053 - 24732016
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||| || ||||||||||||||||||||    
T  24732053 gagggaccaaaagtagaagaatctgaaattacagggac 24732016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 30618147 - 30618184
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcattt 382  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  30618147 ctgtaatttcaaattcctccacttttggtccctcattt 30618184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 32017728 - 32017691
Alignment:
Q  345 ctgtaatttcaaattcttccactgttggtccctcattt 382  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  32017728 ctgtaatttcaaattcctccacttttggtccctcattt 32017691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 32017767 - 32017804
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  32017767 gagggaccaaaagtggaagaatatgaaattacagggac 32017804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 33714683 - 33714642
Alignment:
Q  341 gtctctgtaatttcaaattcttccactgttggtccctcattt 382  Q
    ||||||||||||||| |||| |||||| ||||||||||||||    
T  33714683 gtctctgtaatttcagattcctccacttttggtccctcattt 33714642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 9481446 - 9481482
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  9481446 agggaccaaaagtggaagaatctgaaattacaaggac 9481482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 384
Target Start/End: Original strand, 24732007 - 24732059
Alignment:
Q  332 ttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttca 384  Q
    ||||||| |||| ||||||||||| ||||||| ||| |||||||||| |||||    
T  24732007 ttagattttgtccctgtaatttcagattcttctacttttggtccctcctttca 24732059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 24732198 - 24732238
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  24732198 aatgagggaccaaaagtggaagaatatgaaattacatggac 24732238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 26385396 - 26385356
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| | |||||||||||||    
T  26385396 aatgagggaccaaaagtggaagaatataaaattacagggac 26385356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 33714605 - 33714565
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  33714605 aatgagggaccaaaagtggaagaatatgaaattacaaggac 33714565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 117; Significance: 2e-59; HSPs: 3)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 329 - 501
Target Start/End: Complemental strand, 8634 - 8463
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggac 428  Q
    |||||||||| |||| ||||||||| | ||||||||||| ||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||||| ||    
T  8634 gatttagattttgtccctgtaattttagattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagg-ac 8536  T
Q  429 caaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggatgtaattgatg 501  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  8535 caaaaatggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggacgtaattgatg 8463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 317
Target Start/End: Original strand, 8319 - 8378
Alignment:
Q  258 tttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccc 317  Q
    ||||||| ||||||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  8319 tttttagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccc 8378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 8582 - 8622
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  8582 aatgagggaccaaaagtggaagaatctaaaattacagggac 8622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 108; Significance: 5e-54; HSPs: 4)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 266 - 497
Target Start/End: Complemental strand, 1782 - 1554
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaattcttcca 365  Q
    |||||| |||||||| ||||||||||||||| | |||| || ||||||||||| |         | ||||||||||||  |||||||||| |||||||||    
T  1782 gtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtccctataaaaaa---aattagattatgtccttgtaatttcagattcttcca 1686  T
Q  366 ctgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaag 465  Q
    || |||||||||||  ||||||  |||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  1685 cttttggtccctcacatcaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatctgaaattacaaggaccaaaag 1586  T
Q  466 tgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||||||| ||||| ||||||    
T  1585 tgggaggaatctgaaattatagggacgtaatt 1554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 255 - 401
Target Start/End: Original strand, 1402 - 1548
Alignment:
Q  255 ttgtttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttc 354  Q
    ||||||| || ||||||||||||||| | ||| |||||||| || |||||||||||||||||||||        ||||||||||||||| ||||||||||    
T  1402 ttgttttaagggtaaatacctcttttcgacccggtaatatttgcgaatttcgattttagtccctgtaaaaaaaagatttagattatgtccctgtaatttc 1501  T
Q  355 aaattcttccactgttggtccctcatttcaccatgtcagtagaatct 401  Q
    | ||||||||||| |||||||||| ||||| || ||||| |||||||    
T  1502 agattcttccacttttggtccctcctttcatcacgtcagcagaatct 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Complemental strand, 1525 - 1488
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  1525 gagggaccaaaagtggaagaatctgaaattacagggac 1488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 459
Target Start/End: Original strand, 1672 - 1710
Alignment:
Q  421 tgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  1672 tgagggaccaaaagtggaagaatctgaaattacaaggac 1710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 348 - 486
Target Start/End: Original strand, 305 - 443
Alignment:
Q  348 taatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggaccaaaagtggaggaatctga 447  Q
    |||||||| ||||||||||| ||||||||||||| |||||  | || ||||| |||| |||||  ||||||||||||||||||||||| |||||||||||    
T  305 taatttcagattcttccacttttggtccctcattccaccacataagcagaatttgcatacatggtacgtaaaatgagggaccaaaagtagaggaatctga 404  T
Q  448 aattacagggaccaaaagtgggaggaatctgaaattaca 486  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  405 aattacagggaccaaaatcgggaggaatctgaaattaca 443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 452
Target Start/End: Complemental strand, 338 - 305
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaatta 452  Q
    |||||||||||||||||||| |||||||||||||    
T  338 aatgagggaccaaaagtggaagaatctgaaatta 305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 330 - 464
Target Start/End: Complemental strand, 5059 - 4924
Alignment:
Q  330 atttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctgcacacatgacacgtaaaatgagggacc 429  Q
    |||||||||  ||| ||||||||| | ||||||||||| ||||||||||||| ||||| || || ||||||| || ||||| ||||||||||||||||||    
T  5059 atttagatttagtccctgtaattttagattcttccacttttggtccctcattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggacc 4960  T
Q  430 aaaagt-ggaggaatctgaaattacagggaccaaaa 464  Q
    |||||| |||| ||| |||||||||| |||| ||||    
T  4959 aaaagtgggagaaatatgaaattacatggactaaaa 4924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 4875 - 4932
Alignment:
Q  259 ttttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtcc 316  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  4875 ttttagggtaaatacctctttttgttcctgtaatattagcgaatttcggttttagtcc 4932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 5008 - 5048
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  5008 aatgagggaccaaaagtggaagaatctaaaattacagggac 5048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 62344 - 62440
Alignment:
Q  168 agttatagaaaatcatttgaagtaatttttaggtactg-ttatttaaaacgtgtaataaatggatgaaaacttcaaaaattattatatttgttttta 263  Q
    |||||||||||||||||||||||| ||||||| || || ||||| | || |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  62344 agttatagaaaatcatttgaagtagtttttagatattgattattaataatgtgtaacaaatggatgaaaagttcaaaaattattatatttgttttta 62440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 50; Significance: 2e-19; HSPs: 4)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 454
Target Start/End: Original strand, 7292 - 7422
Alignment:
Q  329 gatttagattatgtctctgtaatttcaaattcttccactgttggtccctcatttcaccatgtcagtagaatctg----cacacatgacacgtaaaatgag 424  Q
    |||||||||| |||| ||||||||||| ||||||||||| | ||||||||||| ||||| |  || | ||||||    || |||||  ||||||||||||    
T  7292 gatttagattttgtccctgtaatttcatattcttccactttcggtccctcattccaccacggaagcaaaatctgactgcatacatggtacgtaaaatgag 7391  T
Q  425 ggaccaaaagtgg-aggaatctgaaattaca 454  Q
    ||||||||||||| |||||||||||||||||    
T  7392 ggaccaaaagtggtaggaatctgaaattaca 7422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 497
Target Start/End: Original strand, 7390 - 7433
Alignment:
Q  454 agggaccaaaagtgggaggaatctgaaattacagggatgtaatt 497  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||    
T  7390 agggaccaaaagtggtaggaatctgaaattacaaggatgtaatt 7433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 374
Target Start/End: Complemental strand, 7576 - 7466
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt--nnnnnnnngatttagattatgtctctgtaatttcaaattcttc 363  Q
    |||||||||| |||| ||||||||||||||||| |||| || |||||||||||||          |||||||||| |||| ||||||||||| |||||||    
T  7576 gtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttc 7477  T
Q  364 cactgttggtc 374  Q
     ||| ||||||    
T  7476 tacttttggtc 7466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 7344 - 7304
Alignment:
Q  419 aatgagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    ||||||||||| |||||||| |||| |||||||||||||||    
T  7344 aatgagggaccgaaagtggaagaatatgaaattacagggac 7304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 269 - 404
Target Start/End: Complemental strand, 12355 - 12219
Alignment:
Q  269 aatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnn-gatttagattatgtctctgtaatttcaaattcttccact 367  Q
    |||||||||||| ||||||||||||||||| |||| || ||||||||||| |         |||||||||| |||| ||||||||||| |||||||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 12256  T
Q  368 gttggtccctcatttcaccatgtcagtagaatctgca 404  Q
     ||||||| || ||||| || ||||| ||||||||||    
T  12255 tttggtccatcctttcatcacgtcagcagaatctgca 12219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 459
Target Start/End: Original strand, 12248 - 12282
Alignment:
Q  425 ggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||| ||||||||||||||||||||    
T  12248 ggaccaaaagtggaagaatctgaaattacagggac 12282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 487
Target Start/End: Original strand, 15800 - 15857
Alignment:
Q  430 aaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacag 487  Q
    |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  15800 aaaagttgaggaatttgaaattacagagaccaaaagtgggaggaatctgaaattacag 15857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 404
Target Start/End: Complemental strand, 16010 - 15869
Alignment:
Q  260 tttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgtnnnnnnnngatttagattatgtctctgtaatttcaaatt 359  Q
    ||||| ||||||| ||||||| |||| |||||||||||| |||| || |||||||| ||||         |   ||||| |||| ||||||||||| |||    
T  16010 tttagggtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtctctgtaaaaaaaaaa---agattttgtccctgtaatttcatatt 15914  T
Q  360 cttccactgttggtccctcatttcaccatgtcagtagaatctgca 404  Q
    ||| |||| |||||| ||| ||||| || ||||| ||||||||||    
T  15913 ctttcacttttggtctctcctttcatcacgtcagcagaatctgca 15869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 5)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 6055 - 6001
Alignment:
Q  266 gtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccctgt 320  Q
    ||||||||||||||| ||||||| ||||||||| |||| ||||||||||||||||    
T  6055 gtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgt 6001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 4781 - 4745
Alignment:
Q  423 agggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||||||||||||||||||||||||||||||||||    
T  4781 agggaccaaaagtggaggaatctgaaattacagggac 4745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 5941 - 5978
Alignment:
Q  422 gagggaccaaaagtggaggaatctgaaattacagggac 459  Q
    |||||| |||||||||||||||||||||||||||||||    
T  5941 gagggatcaaaagtggaggaatctgaaattacagggac 5978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 4664 - 4721
Alignment:
Q  261 ttagagtaaatacctctttttgtccctgtaatattagcaaatttcgattttagtccct 318  Q
    |||| ||||||||||||||| ||||||| ||||||||| |||| |  |||||||||||    
T  4664 ttagggtaaatacctcttttagtccctgcaatattagcgaattccagttttagtccct 4721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 490
Target Start/End: Complemental strand, 4781 - 4746
Alignment:
Q  454 agggaccaaaagtgggaggaatctgaaattacaggga 490  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4781 agggaccaaaagtgg-aggaatctgaaattacaggga 4746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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