View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19069_high_15 (Length: 368)

Name: NF19069_high_15
Description: NF19069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19069_high_15
NF19069_high_15
[»] chr6 (21 HSPs)
chr6 (18-368)||(29519134-29519476)
chr6 (250-368)||(7734288-7734406)
chr6 (216-368)||(24604323-24604475)
chr6 (241-368)||(4508264-4508390)
chr6 (241-368)||(23406867-23406993)
chr6 (216-368)||(1945492-1945642)
chr6 (241-368)||(2539522-2539648)
chr6 (241-368)||(14587522-14587648)
chr6 (241-368)||(17264481-17264607)
chr6 (217-367)||(13800990-13801139)
chr6 (186-368)||(29289587-29289770)
chr6 (275-368)||(2813187-2813280)
chr6 (261-368)||(3717245-3717352)
chr6 (271-368)||(5699665-5699762)
chr6 (241-368)||(5638933-5639059)
chr6 (282-366)||(34528551-34528635)
chr6 (276-367)||(236899-236990)
chr6 (305-368)||(21514993-21515056)
chr6 (273-367)||(6704089-6704183)
chr6 (294-368)||(17500989-17501063)
chr6 (250-306)||(14037986-14038043)
[»] chr7 (35 HSPs)
chr7 (167-368)||(24690296-24690496)
chr7 (241-368)||(28230430-28230556)
chr7 (216-367)||(31985480-31985631)
chr7 (241-368)||(42925603-42925729)
chr7 (261-368)||(9151886-9151993)
chr7 (241-368)||(1518777-1518904)
chr7 (241-368)||(24042150-24042276)
chr7 (241-368)||(36468499-36468625)
chr7 (272-368)||(42865064-42865160)
chr7 (241-368)||(36946254-36946380)
chr7 (216-364)||(6467106-6467254)
chr7 (273-364)||(36408473-36408564)
chr7 (241-368)||(37518257-37518383)
chr7 (251-368)||(5278344-5278461)
chr7 (216-317)||(6467743-6467844)
chr7 (272-368)||(19225560-19225656)
chr7 (261-368)||(33151298-33151400)
chr7 (282-368)||(19818491-19818577)
chr7 (235-368)||(31643106-31643238)
chr7 (273-368)||(3936210-3936305)
chr7 (261-368)||(36629295-36629400)
chr7 (272-368)||(47202595-47202691)
chr7 (272-363)||(3304725-3304816)
chr7 (276-366)||(43185887-43185977)
chr7 (216-300)||(39581784-39581868)
chr7 (273-368)||(33574005-33574100)
chr7 (272-366)||(48775711-48775803)
chr7 (273-366)||(48776175-48776268)
chr7 (272-368)||(8155000-8155096)
chr7 (241-304)||(16983768-16983831)
chr7 (308-368)||(8214463-8214523)
chr7 (242-308)||(48706021-48706087)
chr7 (286-367)||(8214253-8214334)
chr7 (216-266)||(30861149-30861199)
chr7 (301-365)||(5730941-5731005)
[»] chr4 (47 HSPs)
chr4 (241-368)||(25491357-25491483)
chr4 (241-366)||(38536249-38536373)
chr4 (241-368)||(40703743-40703869)
chr4 (241-368)||(2505993-2506119)
chr4 (261-368)||(7931755-7931862)
chr4 (241-367)||(19835599-19835724)
chr4 (216-368)||(48319026-48319178)
chr4 (241-368)||(31582384-31582510)
chr4 (241-368)||(41323054-41323181)
chr4 (216-368)||(3703211-3703363)
chr4 (272-368)||(53893987-53894083)
chr4 (218-368)||(8106448-8106599)
chr4 (261-368)||(17933099-17933206)
chr4 (264-366)||(27879649-27879751)
chr4 (249-361)||(7863527-7863639)
chr4 (216-368)||(55052581-55052732)
chr4 (217-367)||(25752407-25752556)
chr4 (249-323)||(38416913-38416987)
chr4 (241-324)||(37222039-37222122)
chr4 (241-368)||(46440236-46440362)
chr4 (275-368)||(27742075-27742169)
chr4 (250-368)||(14474174-14474291)
chr4 (272-368)||(34972973-34973069)
chr4 (275-363)||(41413065-41413153)
chr4 (218-304)||(346191-346276)
chr4 (290-368)||(25538941-25539019)
chr4 (273-362)||(49002822-49002911)
chr4 (235-316)||(29822692-29822772)
chr4 (272-368)||(6003635-6003731)
chr4 (249-324)||(32600927-32601001)
chr4 (276-366)||(47784101-47784191)
chr4 (272-368)||(6228775-6228871)
chr4 (248-292)||(7863322-7863366)
chr4 (259-303)||(55433734-55433778)
chr4 (248-307)||(54631485-54631543)
chr4 (306-368)||(47873953-47874015)
chr4 (272-337)||(372028-372093)
chr4 (246-299)||(1788077-1788130)
chr4 (279-368)||(25140677-25140766)
chr4 (292-368)||(25140468-25140544)
chr4 (272-367)||(42497839-42497934)
chr4 (293-366)||(52089315-52089388)
chr4 (260-304)||(18487690-18487734)
chr4 (272-324)||(23524016-23524068)
chr4 (272-368)||(32441919-32442015)
chr4 (241-364)||(37770026-37770150)
chr4 (272-324)||(49397117-49397169)
[»] chr8 (35 HSPs)
chr8 (250-363)||(40392615-40392728)
chr8 (216-368)||(4259597-4259749)
chr8 (171-368)||(17119841-17120038)
chr8 (241-368)||(3094752-3094882)
chr8 (261-368)||(8885415-8885522)
chr8 (241-368)||(42280853-42280979)
chr8 (241-368)||(44106294-44106420)
chr8 (241-366)||(16310670-16310794)
chr8 (241-368)||(14164019-14164145)
chr8 (241-368)||(27927903-27928029)
chr8 (241-366)||(37248629-37248753)
chr8 (261-362)||(40994882-40994983)
chr8 (241-368)||(34853399-34853525)
chr8 (271-368)||(28916875-28916972)
chr8 (272-368)||(36165800-36165896)
chr8 (217-367)||(1076603-1076751)
chr8 (272-368)||(9073605-9073701)
chr8 (272-365)||(7982479-7982572)
chr8 (263-368)||(11698278-11698383)
chr8 (278-367)||(40328004-40328093)
chr8 (273-368)||(28423523-28423618)
chr8 (216-363)||(36317836-36317988)
chr8 (265-368)||(33472372-33472475)
chr8 (278-368)||(10833477-10833567)
chr8 (272-362)||(31519860-31519950)
chr8 (241-366)||(6395154-6395279)
chr8 (295-368)||(33472195-33472268)
chr8 (294-368)||(31234480-31234554)
chr8 (275-368)||(7981618-7981711)
chr8 (308-364)||(9845323-9845379)
chr8 (290-368)||(21004503-21004581)
chr8 (241-289)||(8621710-8621759)
chr8 (291-368)||(36980689-36980766)
chr8 (294-358)||(24627697-24627761)
chr8 (272-324)||(32504309-32504361)
[»] chr3 (44 HSPs)
chr3 (216-368)||(38977710-38977861)
chr3 (241-367)||(50716323-50716448)
chr3 (241-367)||(50796399-50796524)
chr3 (216-368)||(51258448-51258601)
chr3 (241-368)||(33438592-33438718)
chr3 (241-368)||(3902768-3902894)
chr3 (216-366)||(3352030-3352179)
chr3 (241-368)||(501103-501228)
chr3 (241-368)||(34821305-34821431)
chr3 (241-368)||(51540576-51540702)
chr3 (246-368)||(51492874-51492996)
chr3 (261-366)||(28873095-28873200)
chr3 (216-368)||(5127861-5128012)
chr3 (241-368)||(30721772-30721893)
chr3 (261-368)||(35142164-35142271)
chr3 (241-368)||(47739894-47740020)
chr3 (246-368)||(52777307-52777428)
chr3 (249-368)||(49096188-49096307)
chr3 (241-360)||(27143386-27143504)
chr3 (216-366)||(47979970-47980120)
chr3 (216-368)||(29048388-29048539)
chr3 (285-368)||(47123140-47123223)
chr3 (252-361)||(45712053-45712162)
chr3 (273-368)||(43472931-43473026)
chr3 (285-368)||(47130506-47130589)
chr3 (272-368)||(2358584-2358680)
chr3 (241-368)||(39149880-39150006)
chr3 (258-367)||(29035885-29035995)
chr3 (272-355)||(3937480-3937563)
chr3 (272-365)||(26053485-26053579)
chr3 (261-313)||(46622801-46622853)
chr3 (258-368)||(14828881-14828991)
chr3 (216-304)||(11266313-11266401)
chr3 (216-324)||(43420136-43420244)
chr3 (272-324)||(47302121-47302173)
chr3 (306-368)||(46624855-46624917)
chr3 (272-364)||(512214-512306)
chr3 (294-358)||(8735309-8735373)
chr3 (294-358)||(9087550-9087614)
chr3 (241-337)||(29035784-29035880)
chr3 (308-368)||(35345871-35345931)
chr3 (308-368)||(8735530-8735590)
chr3 (308-368)||(9087771-9087831)
chr3 (272-368)||(33842036-33842132)
[»] chr2 (31 HSPs)
chr2 (216-368)||(41203143-41203295)
chr2 (216-368)||(8388696-8388848)
chr2 (241-368)||(34517171-34517298)
chr2 (241-368)||(45153748-45153874)
chr2 (216-366)||(5507464-5507614)
chr2 (241-368)||(32187826-32187952)
chr2 (241-368)||(44465684-44465810)
chr2 (261-366)||(17474758-17474863)
chr2 (241-366)||(33452402-33452526)
chr2 (272-368)||(41510386-41510481)
chr2 (216-367)||(15995071-15995221)
chr2 (235-368)||(39447227-39447359)
chr2 (261-368)||(36948902-36949009)
chr2 (241-364)||(42894448-42894570)
chr2 (241-368)||(41854861-41854982)
chr2 (241-368)||(19109972-19110098)
chr2 (242-368)||(36875057-36875182)
chr2 (236-365)||(38066633-38066762)
chr2 (256-306)||(12885447-12885497)
chr2 (285-364)||(25217736-25217815)
chr2 (252-327)||(41204013-41204088)
chr2 (272-368)||(17766786-17766882)
chr2 (216-367)||(30763689-30763845)
chr2 (258-304)||(33833842-33833888)
chr2 (273-306)||(45293743-45293776)
chr2 (272-368)||(16750386-16750480)
chr2 (216-284)||(27900673-27900741)
chr2 (217-304)||(13704834-13704920)
chr2 (273-304)||(27900635-27900666)
chr2 (301-368)||(34519494-34519561)
chr2 (241-306)||(35251000-35251065)
[»] chr5 (50 HSPs)
chr5 (217-368)||(32841932-32842084)
chr5 (241-368)||(20891646-20891772)
chr5 (246-367)||(37183744-37183864)
chr5 (241-368)||(38871704-38871830)
chr5 (217-368)||(40613637-40613788)
chr5 (216-366)||(26095099-26095249)
chr5 (241-368)||(29862645-29862771)
chr5 (261-368)||(31929087-31929193)
chr5 (261-368)||(33487662-33487769)
chr5 (261-363)||(15957801-15957903)
chr5 (241-367)||(31221302-31221427)
chr5 (216-366)||(38372317-38372466)
chr5 (216-368)||(15799233-15799384)
chr5 (273-368)||(7884257-7884352)
chr5 (241-367)||(38692746-38692871)
chr5 (216-360)||(13908555-13908699)
chr5 (216-368)||(39524784-39524935)
chr5 (241-368)||(4064682-4064808)
chr5 (241-368)||(26093478-26093605)
chr5 (272-368)||(6156794-6156890)
chr5 (248-364)||(12847482-12847598)
chr5 (250-366)||(23269375-23269494)
chr5 (272-368)||(28083340-28083436)
chr5 (261-352)||(25747077-25747168)
chr5 (218-324)||(1350316-1350421)
chr5 (271-368)||(40619952-40620049)
chr5 (272-368)||(27158147-27158243)
chr5 (256-365)||(24203649-24203758)
chr5 (289-368)||(14111947-14112026)
chr5 (216-323)||(18514809-18514916)
chr5 (242-368)||(27212742-27212863)
chr5 (220-306)||(41639517-41639603)
chr5 (272-368)||(8738947-8739043)
chr5 (272-363)||(26190265-26190356)
chr5 (294-368)||(8739150-8739224)
chr5 (216-306)||(11186199-11186289)
chr5 (271-368)||(21070428-21070525)
chr5 (260-368)||(6800889-6800997)
chr5 (216-304)||(9439480-9439568)
chr5 (292-368)||(16429365-16429441)
chr5 (292-368)||(28445171-28445247)
chr5 (269-368)||(8973571-8973670)
chr5 (294-360)||(27494123-27494189)
chr5 (273-367)||(34530279-34530373)
chr5 (295-368)||(12465081-12465154)
chr5 (252-303)||(25968362-25968414)
chr5 (248-302)||(14001724-14001778)
chr5 (252-304)||(4028003-4028056)
chr5 (260-304)||(33901010-33901054)
chr5 (332-368)||(34530156-34530192)
[»] chr1 (35 HSPs)
chr1 (241-368)||(17000449-17000575)
chr1 (241-368)||(28866592-28866719)
chr1 (216-368)||(34006305-34006458)
chr1 (241-368)||(32817573-32817699)
chr1 (241-367)||(3561298-3561424)
chr1 (243-367)||(27794904-27795027)
chr1 (280-368)||(41584627-41584715)
chr1 (241-368)||(40650637-40650763)
chr1 (241-368)||(44573059-44573184)
chr1 (242-368)||(52744805-52744930)
chr1 (272-368)||(7011311-7011407)
chr1 (272-368)||(45046812-45046908)
chr1 (261-368)||(15069803-15069910)
chr1 (241-362)||(34162690-34162809)
chr1 (261-366)||(49677573-49677678)
chr1 (244-368)||(42546041-42546164)
chr1 (216-367)||(40907897-40908047)
chr1 (244-366)||(24472791-24472913)
chr1 (216-368)||(23442784-23442935)
chr1 (280-368)||(45567852-45567940)
chr1 (241-368)||(18583506-18583632)
chr1 (241-366)||(8704482-8704607)
chr1 (223-363)||(26723455-26723595)
chr1 (272-368)||(49786369-49786465)
chr1 (217-304)||(5210305-5210392)
chr1 (272-368)||(33611372-33611468)
chr1 (241-314)||(38885298-38885370)
chr1 (279-368)||(9446057-9446146)
chr1 (272-324)||(32542494-32542546)
chr1 (242-366)||(42928953-42929079)
chr1 (244-361)||(890587-890704)
chr1 (216-283)||(6223783-6223850)
chr1 (249-296)||(25563440-25563487)
chr1 (294-368)||(9445848-9445922)
chr1 (294-368)||(43318942-43319016)
[»] scaffold0027 (1 HSPs)
scaffold0027 (241-368)||(141925-142051)
[»] scaffold0508 (1 HSPs)
scaffold0508 (235-368)||(3357-3489)
[»] scaffold0137 (1 HSPs)
scaffold0137 (261-351)||(9476-9566)
[»] scaffold0182 (1 HSPs)
scaffold0182 (297-368)||(23228-23299)
[»] scaffold0006 (2 HSPs)
scaffold0006 (271-362)||(59938-60029)
scaffold0006 (285-362)||(59474-59551)
[»] scaffold0091 (1 HSPs)
scaffold0091 (216-296)||(2097-2177)
[»] scaffold0010 (1 HSPs)
scaffold0010 (306-368)||(140620-140682)
[»] scaffold0564 (1 HSPs)
scaffold0564 (261-304)||(4461-4504)


Alignment Details
Target: chr6 (Bit Score: 194; Significance: 1e-105; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 18 - 368
Target Start/End: Original strand, 29519134 - 29519476
Alignment:
Q  18 aaattaatgggtgtgcacaaggcatggtccaatcattacaaaaataggttgaagaaaacaaacaaggctctacaccaagtggcagacttatctggatttc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29519134 aaattaatgggtgtgcacaaggcatggtccaatcattacaaaaataggttgaagaaaacaaagaaggctctacaccaagtggcagacttatctggatttc 29519233  T
Q  118 atctaaataatgggtattatgctgtattttatttattattttgtg--tatatatgtaatccaaaaacttcaaaaaataggacccactatttgannnnnnn 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| || |||| ||||||||||   | || |||||           
T  29519234 atctaaataatgggtattatgctgtattttatttattattttgtgtatatatatgtaatccgaacactttaaaaaatagggtgcgctgtttgattttttc 29519333  T
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
     ||||||||||||  ||| ||||| ||||||| |||||||          ||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  29519334 agattatataatttaaacaccccaaaaacaccatttttca----------agttcggattatataatatgaactgtatcagcacaaattctaaacatgtt 29519423  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | ||||||||||||| |||||||||| | ||||||||||||||||| ||||||    
T  29519424 tgtaacatgaattgtcattttatggaaaatattaatcttcctaactatcatcc 29519476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 250 - 368
Target Start/End: Complemental strand, 7734406 - 7734288
Alignment:
Q  250 ttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtatta 349  Q
    ||||||||| |||||||||| ||||||||||||  |||||||||||  ||||||||||||||||||| ||||| ||||||| |||||||||||| |||||    
T  7734406 ttttcaaggaaaaaacagttcagattatataattcgaactgtatcaatacaaattctaaacatgtttgtaacacgaattgtcattttatggacaatatta 7734307  T
Q  350 atcttcctaactctcatcc 368  Q
    |||||||||||| ||||||    
T  7734306 atcttcctaactatcatcc 7734288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 216 - 368
Target Start/End: Complemental strand, 24604475 - 24604323
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| ||||| ||||| ||||  ||||||| ||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||| ||    
T  24604475 ggattacataatccgaacaccccttaaacaccatttttcaagggaaaaacagttcatattatataatctgaactctatcagcacaaattctaaacatatt 24604376  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | |||||   || || ||||||  |||| ||||||||||||||||| ||||||    
T  24604375 tgtaacaaagatagtcattttagagacaatattaatcttcctaactttcatcc 24604323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 4508390 - 4508264
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||| |||||||||||| |||| |||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| || || |||||| ||    
T  4508390 aaacaacttttttcaaggtaaaa-cagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttaggg 4508292  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||| ||||||    
T  4508291 acaatattaatcttcctaactttcatcc 4508264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 23406867 - 23406993
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||   ||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || |||||| ||    
T  23406867 aaacaccatttttcaaggtaaaa-cagttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 23406965  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  23406966 acaatattaatcttcctaactctcatcc 23406993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 368
Target Start/End: Complemental strand, 1945642 - 1945492
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    ||||||||||||  |||| ||||  |||| || ||||||||| ||||| || || ||||||||||||| |||||||||| ||||||||||||||||||||    
T  1945642 ggattatataatctgaacacccct-aaaccccatttttcaagtgaaaa-caattcagattatataatccgaactgtatcggcacaaattctaaacatgtt 1945545  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | ||||||| || || |||||| ||| | ||||||||||||||||||||||||    
T  1945544 tgtaacatggatagtcattttagggataatattaatcttcctaactctcatcc 1945492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 2539522 - 2539648
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| ||||| |||| ||||||||||| ||||||||| ||||||| || || |||||| ||    
T  2539522 aaacaccctttttcaaggtaaaa-cagttcggattatataatccgaactctatccgcacaaattctgaacatgtttgtaacatggatagtcattttaggg 2539620  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  2539621 acaatattaatcttcctaactctcatcc 2539648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 14587648 - 14587522
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  ||||||||||||  ||||||||| ||||||||||||||||||||| ||||||| || || |||||| ||    
T  14587648 aaacaccatttttcaaggtaaaa-cagttcggattatataatcataactgtatcggcacaaattctaaacatgtttgtaacatggatagtcattttacgg 14587550  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||| ||||    
T  14587549 acaatattaatcttcctaactctaatcc 14587522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 17264481 - 17264607
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| ||||  ||||  |||||||||||||||||||||||||||||||||||||||||||||  ||||||  | || |||||| ||    
T  17264481 aaacaccctttttcaaggtaaaat-agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgcaacatggttagtcattttaggg 17264579  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| |||| |||||||||||||||||||    
T  17264580 acaatatttatcttcctaactctcatcc 17264607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 217 - 367
Target Start/End: Complemental strand, 13801139 - 13800990
Alignment:
Q  217 gattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgttt 316  Q
    ||||||||||| ||||| ||||  ||||||| |||| ||||| || |||||||  ||||| |||||| ||||||||| |||| |||||||||||||||||    
T  13801139 gattatataatccgaacaccccttaaacaccctttt-caaggaaagaacagttcggattacataatcggaactgtattagcataaattctaaacatgttt 13801041  T
Q  317 ataacatgaattgttattttatggacagtattaatcttcctaactctcatc 367  Q
     ||||||  ||| | |||||||| ||| |||||||||||||||||||||||    
T  13801040 gtaacatagattatcattttatgaacaatattaatcttcctaactctcatc 13800990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 186 - 368
Target Start/End: Complemental strand, 29289770 - 29289587
Alignment:
Q  186 aaaaaataggacccactatttgannnnnnnggattatataattcgaacgccccacaaacacc-ttttttcaagggaaaaacagtttagattatataatct 284  Q
    |||||||||||| | ||||||||       ||||||||||||  |||| ||||  ||||||| |||||||||| |||||||| ||  |||||||||||||    
T  29289770 aaaaaataggacacgctatttgatttttccggattatataatctgaacaccccttaaacaccattttttcaagtgaaaaacaattcggattatataatct 29289671  T
Q  285 gaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||||||||||| | ||||| ||| ||||||  ||  | |||||||||||| ||||||| |||||||||| |||||    
T  29289670 gaactgtatcagcacaaattatgaacatctttgtaacatagatattaattttatggacaatattaattttcctaactcgcatcc 29289587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 275 - 368
Target Start/End: Complemental strand, 2813280 - 2813187
Alignment:
Q  275 tatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||| ||||||||||| |||||||||||||||| ||| |||||||||| || |||||||||| | ||||||||||||||||||||||||    
T  2813280 tatataatccgaactgtatcaccacaaattctaaacatatttttaacatgaatagtcattttatggataatattaatcttcctaactctcatcc 2813187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 261 - 368
Target Start/End: Complemental strand, 3717352 - 3717245
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||||||  |||||||||||| ||||||||||| |||||||||||||||||| | ||||||| || || |||||| ||||| ||||||| || |||||    
T  3717352 aaaacagttcggattatataatccgaactgtatcatcacaaattctaaacatgtctgtaacatggatagtcattttagggacaatattaatttttctaac 3717253  T
Q  361 tctcatcc 368  Q
    ||||||||    
T  3717252 tctcatcc 3717245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 271 - 368
Target Start/End: Original strand, 5699665 - 5699762
Alignment:
Q  271 agattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||||| ||||||||| | ||||||||||||| |||||| ||||||| || || |||||| ||||| ||||||||||| ||||||||||||    
T  5699665 agattatataatccgaactgtattaacacaaattctaaatatgtttgtaacatggatagtcattttaaggacaatattaatcttcataactctcatcc 5699762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 5638933 - 5639059
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| |||||||||||||||| ||  ||||||||| | ||||||  || |  ||| || ||    
T  5638933 aaacaccctttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacatatcataaacatgtctgtaacatatatagccattctaggg 5639031  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||| ||||||| ||||    
T  5639032 acaatattaatcttcttaactcttatcc 5639059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 366
Target Start/End: Original strand, 34528551 - 34528635
Alignment:
Q  282 tctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcat 366  Q
    ||||||||||||||||||||||| | ||||||||| ||||||| ||  | |||| | ||| | |||||||||| |||||||||||    
T  34528551 tctgaactgtatcagcacaaattatgaacatgtttgtaacatggatattcatttcaaggataatattaatctttctaactctcat 34528635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 367
Target Start/End: Original strand, 236899 - 236990
Alignment:
Q  276 atataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatc 367  Q
    |||||||  ||||| |||||||||||||| | ||||||||| ||||||| |   | |||||| ||||  |||||||||||||||||||||||    
T  236899 atataattcgaactatatcagcacaaattatgaacatgtttgtaacatggaaaatcattttaaggaccatattaatcttcctaactctcatc 236990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 305 - 368
Target Start/End: Complemental strand, 21515056 - 21514993
Alignment:
Q  305 ctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||| |||||| ||||||| || || |||||| ||||| ||||||||||||||||||||||||    
T  21515056 ctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcc 21514993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 367
Target Start/End: Complemental strand, 6704183 - 6704089
Alignment:
Q  273 attatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatc 367  Q
    ||||||||||| ||||||| | ||||||||||| |||  | ||| ||||||| ||   || |||| ||||| |||||||||||||||||||||||    
T  6704183 attatataatccgaactgtgttagcacaaattccaaatctatttgtaacatggataactagtttaaggacaatattaatcttcctaactctcatc 6704089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 368
Target Start/End: Original strand, 17500989 - 17501063
Alignment:
Q  294 cagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||| || ||| ||||||||| |||||||||| || |||||| ||||| ||||||||||||||| | ||||||    
T  17500989 cagcaccaaatctgaacatgtttgtaacatgaatagtcattttaaggacattattaatcttcctaattttcatcc 17501063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 14038043 - 14037986
Alignment:
Q  250 ttttcaagggaa-aaacagtttagattatataatctgaactgtatcagcacaaattct 306  Q
    |||||||||| | ||||||||  |||||||||| | ||||||||||||||||||||||    
T  14038043 ttttcaagggtagaaacagttcggattatataacccgaactgtatcagcacaaattct 14037986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 8e-43; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 167 - 368
Target Start/End: Complemental strand, 24690496 - 24690296
Alignment:
Q  167 tatgtaatccaaaaacttcaaaaaataggacccactatttgannnnnnnggattatataattcgaacgccccacaaacaccttttttcaagggaaaaaca 266  Q
    ||||||||||  ||||||||||||||||| | ||||||||||        ||||||| ||| ||||| |||| |||||||| ||||||||||||||||||    
T  24690496 tatgtaatccggaaacttcaaaaaatagggctcactatttgattttttcagattatacaatccgaacacccctcaaacaccctttttcaagggaaaaaca 24690397  T
Q  267 gtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcat 366  Q
    | |  ||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||| || || |||||||||||| ||||||||| ||||||||||||    
T  24690396 gatg-gattatataatctgaactgtatcagcataaattttaagcatgtttgtaacatggatcgtcattttatggacaatattaatctacctaactctcat 24690298  T
Q  367 cc 368  Q
    ||    
T  24690297 cc 24690296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 28230556 - 28230430
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || |||||||||    
T  28230556 aaacaccctttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatgg 28230458  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  28230457 acaatattaatcttcctaactctcatcc 28230430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 216 - 367
Target Start/End: Complemental strand, 31985631 - 31985480
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| ||||||||||| ||||  ||||||| |||||||||||  ||||||||  |||||||||||  ||||||||||| |||||||| ||||||| ||    
T  31985631 ggattacataattcgaacaccccttaaacaccatttttcaagggggaaacagttcggattatataattcgaactgtatcaacacaaattttaaacatatt 31985532  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatc 367  Q
    | |||||||||| || |||||||||||| |||||||||| ||||||||||||    
T  31985531 tttaacatgaatagtcattttatggacaatattaatctttctaactctcatc 31985480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 42925729 - 42925603
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    |||||||||||||||||| |||| |||||  |||||||||||  |||||||||||||||||||||||||||||||| ||||||| || || |||||| ||    
T  42925729 aaacaccttttttcaaggtaaaa-cagttcggattatataatacgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 42925631  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  42925630 acaatattaatcttcctaactctcatcc 42925603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 261 - 368
Target Start/End: Original strand, 9151886 - 9151993
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    ||||||||  ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || |||||| ||||| ||||||||||||||||    
T  9151886 aaaacagtccagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 9151985  T
Q  361 tctcatcc 368  Q
    ||||||||    
T  9151986 tctcatcc 9151993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 1518777 - 1518904
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    |||||||  ||| ||||||||||||||||  |||||||||||| |||||||||||||||||||| ||||||||||| ||||||  ||  | |||||||||    
T  1518777 aaacacccgtttgcaagggaaaaacagttcggattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatcgataatcattttatgg 1518876  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||| ||||||||||||    
T  1518877 acaatattaatcttcttaactctcatcc 1518904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 24042276 - 24042150
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||  || || |||||| ||    
T  24042276 aaacaccatttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcattttaggg 24042178  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||| ||||||||||||||||||||    
T  24042177 acaatatcaatcttcctaactctcatcc 24042150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 36468625 - 36468499
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| ||||||  ||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || |||||| |     
T  36468625 aaacaccctttttcaaggtaaaa-cagtttgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagga 36468527  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||| ||||||||||||    
T  36468526 acaatattaatcttcataactctcatcc 36468499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 42865160 - 42865064
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||| ||||||||||||||||||||||||| |||||| ||||||| || || |||||| ||||| ||||||||||||||||||||||||    
T  42865160 gattatataatccgaactgtatcagcacaaattctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcc 42865064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 36946380 - 36946254
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    |||||||||||||||||||||||||| ||  |||||||||| | |||||||||||||||||||||| || |||||| ||||||||||  | ||||||  |    
T  36946380 aaacaccttttttcaagggaaaaacaattcggattatataacccgaactgtatcagcacaaattctgaatatgtttgtaacatgaataatcatttta-ag 36946282  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| |||||| |||||||||||||||||    
T  36946281 acaatattaagcttcctaactctcatcc 36946254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 364
Target Start/End: Complemental strand, 6467254 - 6467106
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||||| ||| ||||| |||   ||||| | |||||||||||||||||| || ||||||||||||| ||||| ||||| ||||| |||||||||||||    
T  6467254 ggattatagaatccgaacaccctctaaacatcatttttcaagggaaaaacaattcagattatataatccgaactatatcaacacaagttctaaacatgtt 6467155  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctc 364  Q
    | ||| ||| || ||||||||| || || ||||||| ||||||||||||    
T  6467154 tgtaatatggatagttattttaagggcaatattaattttcctaactctc 6467106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 273 - 364
Target Start/End: Original strand, 36408473 - 36408564
Alignment:
Q  273 attatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctc 364  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || |||||| ||||| ||||||||||| ||||||||    
T  36408473 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtaattttagggacaatattaatcttcttaactctc 36408564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 37518383 - 37518257
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| |||||||||||||| ||||||||||||||||| |||||   || || |||||| |     
T  37518383 aaacaccatttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcataaattctaaacatgtttgtaacagagatagtcattttagga 37518285  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  37518284 acactattaatcttcctaactctcatcc 37518257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 251 - 368
Target Start/End: Original strand, 5278344 - 5278461
Alignment:
Q  251 tttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaa 350  Q
    |||||||||||||| ||||  |||||||||||||||||||||| |||| ||||| | ||||||||| ||||||| || || |||||| ||| | ||||||    
T  5278344 tttcaagggaaaaatagttcggattatataatctgaactgtattagcataaattttgaacatgtttgtaacatggatagtcattttaaggataatattaa 5278443  T
Q  351 tcttcctaactctcatcc 368  Q
    ||||||||||||| ||||    
T  5278444 tcttcctaactcttatcc 5278461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 317
Target Start/End: Original strand, 6467743 - 6467844
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| ||||| ||||| ||||  ||||||| |||||||||||||||||||||  |||||||||||| |||||||||||||| ||||| ||||||||||    
T  6467743 ggattacataatccgaacaccccctaaacaccctttttcaagggaaaaacagttcggattatataatccgaactgtatcagcataaattttaaacatgtt 6467842  T
Q  316 ta 317  Q
    ||    
T  6467843 ta 6467844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 19225656 - 19225560
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||  | ||||||||||   ||| ||||||||||||||||||||    
T  19225656 gattatataatctgaacggtatcagcacaaattctaaacatgtttgtaacatggatattcattttatggatgatataaatcttcctaactctcatcc 19225560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 261 - 368
Target Start/End: Original strand, 33151298 - 33151400
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||||||  |||||||||||  |||||||||||||||||||||||||||||||| |||||||||| |     ||| ||||| ||||||||||||||||    
T  33151298 aaaacagttcggattatataattcgaactgtatcagcacaaattctaaacatgtttgtaacatgaatag-----ttagggacaatattaatcttcctaac 33151392  T
Q  361 tctcatcc 368  Q
    ||||||||    
T  33151393 tctcatcc 33151400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 368
Target Start/End: Original strand, 19818491 - 19818577
Alignment:
Q  282 tctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||| ||||||||||||| ||||||||| || ||||||| || ||||||||| ||||| ||||||||||||||||||||||||    
T  19818491 tctgaactctatcagcacaaatcctaaacatgcttgtaacatggatagttattttagggacaatattaatcttcctaactctcatcc 19818577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 235 - 368
Target Start/End: Original strand, 31643106 - 31643238
Alignment:
Q  235 ccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttatt 334  Q
    |||| |||||||| ||||| |||| ||||  ||||  ||||||||||||||||||| ||||||| |||| |||||||| ||| ||||||| || | ||||    
T  31643106 ccccccaaacacccttttttaaggtaaaat-agttcggattatataatctgaactggatcagcataaatcctaaacatatttttaacatgtatagctatt 31643204  T
Q  335 ttatggacagtattaatcttcctaactctcatcc 368  Q
    ||| ||||| ||||||||||||||||||| ||||    
T  31643205 ttagggacaatattaatcttcctaactcttatcc 31643238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 273 - 368
Target Start/End: Original strand, 3936210 - 3936305
Alignment:
Q  273 attatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||| ||| ||||| |||||||||| ||||||||||| ||||||| ||  | |||||| ||||| ||||||||||||||||||||||||    
T  3936210 attatataatccgaaatgtattagcacaaattgtaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatcc 3936305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 261 - 368
Target Start/End: Original strand, 36629295 - 36629400
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||||||  |||||||||||| ||||||||||||| |||||| ||||||||||| | |||||  | || |||||| ||| | ||||||||||||||||    
T  36629295 aaaacagttcggattatataatccgaactgtatcagcgcaaattttaaacatgtttgttacatg--tcgtcattttagggagaatattaatcttcctaac 36629392  T
Q  361 tctcatcc 368  Q
    ||||||||    
T  36629393 tctcatcc 36629400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 47202595 - 47202691
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||| ||||||| || |   ||||| ||||| ||||||||||||||||||| ||||    
T  47202595 gattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccgttttagggacaatattaatcttcctaactcttatcc 47202691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 272 - 363
Target Start/End: Complemental strand, 3304816 - 3304725
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactct 363  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||| ||||||| ||    |||||| ||||| |||||||||||||||||||    
T  3304816 gattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttagggacaatattaatcttcctaactct 3304725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 366
Target Start/End: Original strand, 43185887 - 43185977
Alignment:
Q  276 atataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcat 366  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||| ||  | ||||| |||||| ||||||  ||||||||||||||    
T  43185887 atataatccaaactgtatcagcacaaattttaaacatgtttataacatggataatcattttttggacaatattaacattcctaactctcat 43185977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 300
Target Start/End: Original strand, 39581784 - 39581868
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcaca 300  Q
    |||||||| ||||| ||| ||||| ||||||| |||||||||||| ||| | || ||||||||||||| ||||||||||||||||    
T  39581784 ggattatagaattcaaacaccccataaacaccctttttcaagggagaaataattcagattatataatccgaactgtatcagcaca 39581868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 273 - 368
Target Start/End: Complemental strand, 33574100 - 33574005
Alignment:
Q  273 attatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||||||||||||| |||||||||  ||||||| ||| ||||||| ||   ||||||| ||||| |||||||||| |||||||| ||||    
T  33574100 attatataatctgaactgtatgagcacaaatcataaacatatttgtaacatgtataactattttagggacaatattaatctttctaactcttatcc 33574005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 366
Target Start/End: Original strand, 48775711 - 48775803
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcat 366  Q
    |||||||||||| |||||||||  ||||||||| |||||||| || |||||||||| || | |||| ||||| ||||||||||||||||| ||||    
T  48775711 gattatataatccgaactgtat--gcacaaattttaaacatgcttgtaacatgaatagtcagtttaaggacaatattaatcttcctaactatcat 48775803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 273 - 366
Target Start/End: Complemental strand, 48776268 - 48776175
Alignment:
Q  273 attatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcat 366  Q
    |||||||||||  || | ||| |||||||||| | ||||||||||||||||| || || |||||| ||| | ||||||||||||||||||||||    
T  48776268 attatataatccaaattatattagcacaaattttgaacatgtttataacatggatagtgattttaaggataatattaatcttcctaactctcat 48776175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 8155000 - 8155096
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||||| |||| ||||||||||||| |||||||| ||| ||||||| || |  |||||| ||||| ||| |||||||||| |||| ||||    
T  8155000 gattatataatctaaactctatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatcaatcttcctagctcttatcc 8155096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 16983831 - 16983768
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaatt 304  Q
    ||||||| ||||||| || ||||||||||  |||||||||||||||| ||||||||||||||||    
T  16983831 aaacaccatttttcagggaaaaaacagttcggattatataatctgaattgtatcagcacaaatt 16983768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 8214523 - 8214463
Alignment:
Q  308 aacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||| ||||||  ||||| |||||| ||||| ||||||||||||||||||||||||    
T  8214523 aacatgtttgtaacatcgattgtcattttaaggacaatattaatcttcctaactctcatcc 8214463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 48706087 - 48706021
Alignment:
Q  242 aacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaa 308  Q
    |||||| || |||||||| |||||| ||  | ||||||||||||||||||||||||||| |||||||    
T  48706087 aacacccttattcaaggggaaaacaattcggtttatataatctgaactgtatcagcacagattctaa 48706021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 8214334 - 8214253
Alignment:
Q  286 aactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatc 367  Q
    ||||| |||| ||| |||||| |||||||||  |||||| || || ||| || ||||| |||||||||||||||||||||||    
T  8214334 aactgcatcaacaccaattctgaacatgtttgcaacatggatagtcattctaaggacaatattaatcttcctaactctcatc 8214253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 30861149 - 30861199
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaaca 266  Q
    |||||||| ||| ||||| ||||| ||||||||||||||| ||||||||||    
T  30861149 ggattatagaatccgaacaccccataaacaccttttttcaggggaaaaaca 30861199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 5731005 - 5730941
Alignment:
Q  301 aattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctca 365  Q
    |||||||||||||||| || ||||||| || ||||||   ||| |||||||||| ||||||||||    
T  5731005 aattctaaacatgtttgtagcatgaatagtcattttaaatacaatattaatctttctaactctca 5730941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 3e-42; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 25491483 - 25491357
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    |||||||||||||||||| |||| || ||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  25491483 aaacaccttttttcaaggtaaaa-caattcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttatgg 25491385  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  25491384 acaatattaatcttcctaactctcatcc 25491357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 241 - 366
Target Start/End: Original strand, 38536249 - 38536373
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    |||||||||||||||||| |||| |||||  ||||||||||||| || |||||| ||||||||||||||||||||| |||||||||| || |||||||||    
T  38536249 aaacaccttttttcaaggtaaaa-cagttcggattatataatctaaattgtatctgcacaaattctaaacatgtttgtaacatgaatagtcattttatgg 38536347  T
Q  341 acagtattaatcttcctaactctcat 366  Q
    ||| ||||||||||||||||||||||    
T  38536348 acaatattaatcttcctaactctcat 38536373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 40703743 - 40703869
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || |||||| ||    
T  40703743 aaacaccctttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 40703841  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  40703842 acaatattaatcttcctaactctcatcc 40703869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 2506119 - 2505993
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||| |||||||||||| |||||||||||||||||||| ||||||||||| ||||||| || || |||||| ||    
T  2506119 aaacaccctttttcaaggtaaaa-cagtttggattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttaggg 2506021  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||| ||||||||    
T  2506020 acaatattaatcttcctaattctcatcc 2505993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 261 - 368
Target Start/End: Original strand, 7931755 - 7931862
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||||||  |||||||||||||||||| ||| |||||||||||||||||||||| ||||||| || ||||||||| ||||| ||||||||||||||||    
T  7931755 aaaacagttcggattatataatctgaactatattagcacaaattctaaacatgtttgtaacatggatagttattttagggacaatattaatcttcctaac 7931854  T
Q  361 tctcatcc 368  Q
    ||||||||    
T  7931855 tctcatcc 7931862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 241 - 367
Target Start/End: Original strand, 19835599 - 19835724
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || |||||| |     
T  19835599 aaacaccctttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagga 19835697  T
Q  341 acagtattaatcttcctaactctcatc 367  Q
    ||| |||||||||||||||||||||||    
T  19835698 acaatattaatcttcctaactctcatc 19835724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 216 - 368
Target Start/End: Complemental strand, 48319178 - 48319026
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| ||||| ||||  ||||  |||||||||||||  | || ||||||| |  |||||||||||| |||||||||||||||||||||||||||||||    
T  48319178 ggattacataatccgaaaaccccctaaacacctttttttcaaggtaaaacagctcggattatataatccgaactgtatcagcacaaattctaaacatgtt 48319079  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | ||||||  || || |||||| ||||| ||||||||||||||||||||||||    
T  48319078 tgtaacattgatagtcattttagggacaatattaatcttcctaactctcatcc 48319026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 31582510 - 31582384
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||||| || || ||||||||     
T  31582510 aaacaccctttttcaaggtaaaa-cagttcggattatataatctgaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatga 31582412  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| | ||||| ||||||||||||||||    
T  31582411 acaatgttaattttcctaactctcatcc 31582384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 41323181 - 41323054
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||||||||||| ||  |||||||| || | ||| |||||| |||||||||||||||||||| ||||||| ||  | |||||||||    
T  41323181 aaacaccctttttcaagggaaaaacaattcggattatatcattttaaccgtatcaacacaaattctaaacatgtttgtaacatggataatcattttatgg 41323082  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  41323081 acaatattaatcttcctaactctcatcc 41323054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 368
Target Start/End: Complemental strand, 3703363 - 3703211
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| ||||||||||| ||||  ||||||| |||||||||||||||||||||  | |||||||||   ||||||||||||||||||||||||||| ||    
T  3703363 ggattacataattcgaacaccccctaaacaccatttttcaagggaaaaacagttatggttatataattcaaactgtatcagcacaaattctaaacatttt 3703264  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | ||||||  || || |||||| | | | ||||||||||| ||||||||||||    
T  3703263 tgtaacatagatagtcattttaggaagaatattaatcttcataactctcatcc 3703211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 53894083 - 53893987
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || |||||| ||||| |||||||||| |||||||||||||    
T  53894083 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatctttctaactctcatcc 53893987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 218 - 368
Target Start/End: Original strand, 8106448 - 8106599
Alignment:
Q  218 attatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgttta 317  Q
    |||| ||||| ||||| ||||  ||||||| |||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||| |||||||||||     
T  8106448 attacataatccgaacaccccctaaacaccatttttctagggaaaaatagttcagattatataatccgaactgtatcagcacaaattttaaacatgtttg 8106547  T
Q  318 taacatgaattgttatttta-tggacagtattaatcttcctaactctcatcc 368  Q
    ||||||| || || ||||||  | ||| | |||||||| |||||||||||||    
T  8106548 taacatggatagtcattttagagaacaatgttaatctttctaactctcatcc 8106599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 261 - 368
Target Start/End: Complemental strand, 17933206 - 17933099
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||||||  |||||||||||| |||| ||||||||||||||||||||||||||| ||||||| ||  | |||||| ||||| ||||||||||||||||    
T  17933206 aaaacagttcggattatataatccgaacagtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacattattaatcttcctaac 17933107  T
Q  361 tctcatcc 368  Q
    ||||||||    
T  17933106 tctcatcc 17933099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 264 - 366
Target Start/End: Original strand, 27879649 - 27879751
Alignment:
Q  264 acagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactct 363  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||| || |||||||||| || |||||| ||||  ||||||| |||||||||||    
T  27879649 acagttcagattatataatctgaactgtatcagcacaaattctgaacatgcttgtaacatgaatggtcattttaaggaccatattaatattcctaactct 27879748  T
Q  364 cat 366  Q
    |||    
T  27879749 cat 27879751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 361
Target Start/End: Original strand, 7863527 - 7863639
Alignment:
Q  249 tttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtatt 348  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |   | |||||| ||||| ||||    
T  7863527 tttttcaaggaaaaaacagttcggattatataatctgaactgtatctgcacaaattctaaacatgtttgtaacatggacaatcattttaaggacaatatt 7863626  T
Q  349 aatcttcctaact 361  Q
    ||| |||||||||    
T  7863627 aatattcctaact 7863639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 368
Target Start/End: Complemental strand, 55052732 - 55052581
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||||||||| || |  ||||  ||||||| |||||||||| |||| |||||   ||||||||||| ||||| |||||||||||||||||||||||||    
T  55052732 ggattatataatccggaaaccccctaaacaccctttttcaaggtaaaa-cagttcgaattatataatccgaactttatcagcacaaattctaaacatgtt 55052634  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | ||||||| || || |||||| ||||| | ||||||||||||||| ||||||    
T  55052633 tgtaacatggatagtcattttagggacaatgttaatcttcctaactatcatcc 55052581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 217 - 367
Target Start/End: Complemental strand, 25752556 - 25752407
Alignment:
Q  217 gattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgttt 316  Q
    ||||| ||||| ||||  ||||| ||||||| |||||||||| |||| |||||  |||||||| ||| ||| ||||| ||||||||||||||||||||||    
T  25752556 gattacataatccgaaaaccccataaacaccctttttcaaggtaaaa-cagttcggattatatgatccgaaatgtattagcacaaattctaaacatgttt 25752458  T
Q  317 ataacatgaattgttattttatggacagtattaatcttcctaactctcatc 367  Q
     ||||||| || || |||||| ||||| ||| |||||||||| ||||||||    
T  25752457 gtaacatggatagtcattttaaggacaatatcaatcttcctagctctcatc 25752407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 249 - 323
Target Start/End: Original strand, 38416913 - 38416987
Alignment:
Q  249 tttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacat 323  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  38416913 tttttcaagggaaaaacagttcaaattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacat 38416987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 37222039 - 37222122
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatg 324  Q
    ||||||| |||||||||||||||||||||  ||||||||||| |||| |||||||||| ||||||||||||||||| |||||||    
T  37222039 aaacaccctttttcaagggaaaaacagttcggattatataatttgaattgtatcagcataaattctaaacatgtttgtaacatg 37222122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 46440362 - 46440236
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| ||||| ||||||||||||||||||||||| || ||||||| ||  | |||||| ||    
T  46440362 aaacaccctttttcaaggtaaaa-cagttcggattatataatccgaactatatcagcacaaattctaaacatggttgtaacatggatattcattttaggg 46440264  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| || |||||||| ||||||||||||    
T  46440263 acaatactaatcttcataactctcatcc 46440236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 368
Target Start/End: Complemental strand, 27742169 - 27742075
Alignment:
Q  275 tatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg-acagtattaatcttcctaactctcatcc 368  Q
    |||||||| |||| |||||||||||||||| ||||||||||| |||||| ||| ||||||||| || ||| ||||||||||||||||||||||||    
T  27742169 tatataatttgaattgtatcagcacaaattttaaacatgtttgtaacataaatagttattttagggaacaatattaatcttcctaactctcatcc 27742075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 368
Target Start/End: Complemental strand, 14474291 - 14474174
Alignment:
Q  250 ttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtatta 349  Q
    |||||||||||||||||||| | ||||||||||||||| ||||||| |||||||| | ||||||||| ||||||| || | |  |||| | ||| |||||    
T  14474291 ttttcaagggaaaaacagttcatattatataatctgaattgtatcaacacaaattttgaacatgtttgtaacatggatag-tcgtttaagaacaatatta 14474193  T
Q  350 atcttcctaactctcatcc 368  Q
    ||||||||||| |||||||    
T  14474192 atcttcctaaccctcatcc 14474174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 34972973 - 34973069
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||| |||||||||||||| |||| |||||||| ||| ||||||| || |  |||||| ||||| ||||||||||||||||||| ||||    
T  34972973 gattatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcc 34973069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 275 - 363
Target Start/End: Complemental strand, 41413153 - 41413065
Alignment:
Q  275 tatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactct 363  Q
    ||||||||| ||||||||||||||||||| |||||||| ||| ||||||| || || |||||| | ||| |||||||||||||||||||    
T  41413153 tatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcattttaggaacaatattaatcttcctaactct 41413065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 218 - 304
Target Start/End: Complemental strand, 346276 - 346191
Alignment:
Q  218 attatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaatt 304  Q
    |||||||||||||||| ||||  ||||||| || |||||||||||| ||||| |||||||| |||||||||||||||| ||||||||    
T  346276 attatataattcgaacaccccttaaacaccattattcaagggaaaa-cagttcagattatagaatctgaactgtatcaacacaaatt 346191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 290 - 368
Target Start/End: Complemental strand, 25539019 - 25538941
Alignment:
Q  290 gtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||||||||||||||||||| ||||||| || || |||||| ||||| ||||||| ||| ||||||||||||    
T  25539019 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcttaactctcatcc 25538941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 273 - 362
Target Start/End: Complemental strand, 49002911 - 49002822
Alignment:
Q  273 attatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactc 362  Q
    |||||||| ||  |||| ||||||||||||||||||| |||||| |||||| ||| || |||||||||| | ||||||||||||||||||    
T  49002911 attatatattccaaactatatcagcacaaattctaaatatgtttgtaacataaatagtcattttatggaaaatattaatcttcctaactc 49002822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 316
Target Start/End: Original strand, 29822692 - 29822772
Alignment:
Q  235 ccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgttt 316  Q
    ||||| ||||||| | |||||||| |||| || ||  |||||||||||| ||||||||||||||||||||||||||||||||    
T  29822692 ccccataaacaccctctttcaaggtaaaa-caattcggattatataatccgaactgtatcagcacaaattctaaacatgttt 29822772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 6003731 - 6003635
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||| |||||||||| ||||||||  ||||||| ||| ||| ||| || || |||||| ||| | ||||||||||||||||||| ||||    
T  6003731 gattatataatccgaactgtatcggcacaaatcataaacatatttttaatatgtatagtcattttagggataatattaatcttcctaactcttatcc 6003635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 324
Target Start/End: Original strand, 32600927 - 32601001
Alignment:
Q  249 tttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatg 324  Q
    |||||||||| |||||||||| ||||||||| || |||| |||||||||||||||||| |||||| || |||||||    
T  32600927 tttttcaagg-aaaaacagttcagattatatgatatgaattgtatcagcacaaattctgaacatgcttgtaacatg 32601001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 366
Target Start/End: Original strand, 47784101 - 47784191
Alignment:
Q  276 atataatctgaactgtatcagcacaaattctaaaca-tgtttataacatgaattgttattttatggacagtattaatcttcctaactctcat 366  Q
    |||||||| ||||| ||||||||||||||||||||| ||||| ||| ||| || || |||||| ||||| |||||||| |||||||||||||    
T  47784101 atataatccgaactatatcagcacaaattctaaacattgtttgtaatatggatagtcattttaaggacaatattaatc-tcctaactctcat 47784191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 6228871 - 6228775
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||| ||||||||||| | ||||| ||||| || ||  ||||||| || |  |||||| ||||| ||||||||||||||||||| ||||    
T  6228871 gattatataatccgaactgtatcaactcaaatcctaaagatattagtaacatgtatagccattttagggacaatattaatcttcctaactcttatcc 6228775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 7863322 - 7863366
Alignment:
Q  248 ttttttcaagggaaaaacagtttagattatataatctgaactgta 292  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  7863322 ttttttcaagggaaaaacagttcggattatataatctgaactgta 7863366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 55433778 - 55433734
Alignment:
Q  259 gaaaaacagtttagattatataatctgaactgtatcagcacaaat 303  Q
    ||||||||||||  |||||||||||||||||||||||||||||||    
T  55433778 gaaaaacagtttgaattatataatctgaactgtatcagcacaaat 55433734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 54631543 - 54631485
Alignment:
Q  248 ttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattcta 307  Q
    ||||||||||| |||| |||||  ||||||| ||||||||||||||||||||||||||||    
T  54631543 ttttttcaaggtaaaa-cagttcggattatacaatctgaactgtatcagcacaaattcta 54631485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 368
Target Start/End: Original strand, 47873953 - 47874015
Alignment:
Q  306 taaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||||||||||| || || |||||| ||||| ||||||||||| ||| ||||||||    
T  47873953 taaacatgtttataacatggatagtcattttagggacaatattaatcttcttaattctcatcc 47874015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 337
Target Start/End: Original strand, 372028 - 372093
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttatttta 337  Q
    |||||||| |||| ||||||||||||||||||| | | ||||||||||||||| || || ||||||    
T  372028 gattatatcatctcaactgtatcagcacaaattatgagcatgtttataacatggatagtcatttta 372093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 1788077 - 1788130
Alignment:
Q  246 ccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcac 299  Q
    |||||||||||| |||||| |||| |||||||||||||  ||||||||||||||    
T  1788077 ccttttttcaagagaaaaatagttcagattatataatccaaactgtatcagcac 1788130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 368
Target Start/End: Complemental strand, 25140766 - 25140677
Alignment:
Q  279 taatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||| |||| | |||||||| |||||| ||||||||| ||||||| || || |||||  ||||| |||||||||||||| || ||||||    
T  25140766 taatccgaacagcatcagcaccaattctgaacatgtttgtaacatggatagtcattttgaggacaatattaatcttcctagctttcatcc 25140677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 368
Target Start/End: Complemental strand, 25140544 - 25140468
Alignment:
Q  292 atcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||| ||| |||||| ||||||||| ||||||| ||  | |||||| | ||| ||||||||||||||||||||||||    
T  25140544 atcaacaccaattctgaacatgtttgtaacatgtataatcattttaagaacaatattaatcttcctaactctcatcc 25140468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 42497934 - 42497839
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatc 367  Q
    |||||||||||||||| |||||||||||||||| | | | ||||| |||| |  || | || |||| ||||  |||||||||| ||||||||||||    
T  42497934 gattatataatctgaattgtatcagcacaaattatgagcttgtttgtaacttatatagctagtttaaggaccatattaatctttctaactctcatc 42497839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 366
Target Start/End: Original strand, 52089315 - 52089388
Alignment:
Q  293 tcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcat 366  Q
    |||||||||||  ||||||||||| ||||||| || || |||||  ||||| ||||||| ||||||||| ||||    
T  52089315 tcagcacaaatcttaaacatgtttgtaacatggatagtcatttttgggacaatattaattttcctaactttcat 52089388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 18487734 - 18487690
Alignment:
Q  260 aaaaacagtttagattatataatctgaactgtatcagcacaaatt 304  Q
    ||||||| || ||||||||||||||||| ||||||| ||||||||    
T  18487734 aaaaacaattcagattatataatctgaattgtatcatcacaaatt 18487690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 23524016 - 23524068
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatg 324  Q
    ||||||||||||   ||||||||||||||||| |||||||| ||| |||||||    
T  23524016 gattatataatccacactgtatcagcacaaatcctaaacatatttgtaacatg 23524068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 32441919 - 32442015
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||||  ||||||| ||||||| ||  ||||||| ||| ||||||| ||    ||||||  |||| ||||||||||||||||||| ||||    
T  32441919 gattatataatccaaactgtaccagcacatatcgtaaacatatttgtaacatgtataaccattttaaagacaatattaatcttcctaactcttatcc 32442015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 364
Target Start/End: Complemental strand, 37770150 - 37770026
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctg-aactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatg 339  Q
    ||||||| || |||||||||||| || || |||||||||||| || ||| |||||| || ||||| | |  |||||| |||||||||| || | ||||      
T  37770150 aaacacccttattcaagggaaaagcaattcagattatataatttgaaacggtatcaacataaattttgagtatgtttgtaacatgaatagtcaatttaat 37770051  T
Q  340 gacagtattaatcttcctaactctc 364  Q
    |||  ||||||||| ||||||||||    
T  37770050 gaccatattaatctccctaactctc 37770026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 49397117 - 49397169
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatg 324  Q
    |||||||||| | |||||||||||||| |||| |||||||| ||| |||||||    
T  49397117 gattatataaaccgaactgtatcagcaaaaatcctaaacatatttgtaacatg 49397169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 250 - 363
Target Start/End: Original strand, 40392615 - 40392728
Alignment:
Q  250 ttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtatta 349  Q
    ||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||| ||||||| || || |||||||||||| |||||    
T  40392615 ttttcaagggaaaaacagttcggattatataatctgtactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatatta 40392714  T
Q  350 atcttcctaactct 363  Q
    ||||||||||||||    
T  40392715 atcttcctaactct 40392728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 216 - 368
Target Start/End: Complemental strand, 4259749 - 4259597
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    ||||||||||||| || | ||||  ||||||| |||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  4259749 ggattatataatttgagcaccccctaaacaccatttttcaagggaaaaataattcggattatataatctgaactgtatcagcacaaattctaagcatgtt 4259650  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | ||||||  || || |||||||||||| ||||||||||||||||| ||||||    
T  4259649 tgtaacattgatagtcattttatggacaatattaatcttcctaactatcatcc 4259597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 171 - 368
Target Start/End: Complemental strand, 17120038 - 17119841
Alignment:
Q  171 taatccaaaaacttcaaaaaataggacccactatttgannnnnnnggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagttt 270  Q
    |||||| ||||||||||||||| || | | ||||||||       || |||||||||  |||| ||||  ||||||| |||||||  |||||| |||||     
T  17120038 taatccgaaaacttcaaaaaattgggcgcgctatttgattttttcggtttatataatctgaacaccccttaaacaccatttttcattggaaaaccagttc 17119939  T
Q  271 agattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
     |||||||||||||||| ||||||||||||||||||||| |||||| ||||||| ||||| |||||| ||||| ||||||||||||||||||||||||    
T  17119938 ggattatataatctgaattgtatcagcacaaattctaaatatgtttgtaacatggattgtcattttacggacaatattaatcttcctaactctcatcc 17119841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 3094752 - 3094882
Alignment:
Q  241 aaacaccttttttcaagggaaaa---acagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttatttta 337  Q
    ||||||| |||||||||| ||||   ||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  | ||||||    
T  3094752 aaacaccatttttcaaggtaaaacaaacagttccgattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcatttta 3094851  T
Q  338 tggacagtattaatcttcctaactctcatcc 368  Q
    |||||| ||||||||||||||||||||||||    
T  3094852 tggacaatattaatcttcctaactctcatcc 3094882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 261 - 368
Target Start/End: Complemental strand, 8885522 - 8885415
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||| ||||| ||||||||||||||||    
T  8885522 aaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 8885423  T
Q  361 tctcatcc 368  Q
    ||||||||    
T  8885422 tctcatcc 8885415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 42280979 - 42280853
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  ||||||||||||||||||||||||||||||||| ||||||||||| ||||||| || || |||||| ||    
T  42280979 aaacaccctttttcaaggtaaaa-cagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatgcatagtcattttaggg 42280881  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  42280880 acaatattaatcttcctaactctcatcc 42280853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 44106294 - 44106420
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||  ||||    
T  44106294 aaacaccctttttcaaggtaaaa-cagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattccatgg 44106392  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  44106393 acaatattaatcttcctaactctcatcc 44106420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 241 - 366
Target Start/End: Original strand, 16310670 - 16310794
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| ||||| | ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| || |||||| ||    
T  16310670 aaacaccctttttcaaggtaaaa-cagttcaaattatataatccgaactatatcagcacaaattctaaacatgtttgtaacatgaatagtcattttaggg 16310768  T
Q  341 acagtattaatcttcctaactctcat 366  Q
    ||| ||||||||||||||||||||||    
T  16310769 acaatattaatcttcctaactctcat 16310794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 14164145 - 14164019
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||||| || || |||||| ||    
T  14164145 aaacaccctttttcaaggtaaaa-cagttcggattatataatctgaaatgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 14164047  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||| ||||||||||||||||    
T  14164046 acaatattaattttcctaactctcatcc 14164019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 27928029 - 27927903
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || ||||||  |    
T  27928029 aaacaccatttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagag 27927931  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  27927930 acaatattaatcttcctaactctcatcc 27927903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 241 - 366
Target Start/End: Original strand, 37248629 - 37248753
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| ||||||  ||||||||||| ||| |||||||||||||||||||||||||||| | ||||| || || |||||| ||    
T  37248629 aaacaccatttttcaaggtaaaa-cagtttgaattatataatccgaattgtatcagcacaaattctaaacatgtttgttacatggatagtcattttaggg 37248727  T
Q  341 acagtattaatcttcctaactctcat 366  Q
    ||| ||||||||||||||||||||||    
T  37248728 acaatattaatcttcctaactctcat 37248753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 261 - 362
Target Start/End: Original strand, 40994882 - 40994983
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || |||||| ||||| ||||||||||||||||    
T  40994882 aaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 40994981  T
Q  361 tc 362  Q
    ||    
T  40994982 tc 40994983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 34853399 - 34853525
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| ||||   ||||||||||||  |||||||||||||||||||||||| |||||| ||||||| || || |||||| ||    
T  34853399 aaacaccctttttcaaggtaaaa-cagtccggattatataatccaaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttaggg 34853497  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  34853498 acaatattaatcttcctaactctcatcc 34853525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 368
Target Start/End: Original strand, 28916875 - 28916972
Alignment:
Q  271 agattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| | ||||| || || |||||| ||||| |||||||||| |||||||||||||    
T  28916875 agattatataatccgaactgtatcagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatctttctaactctcatcc 28916972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 36165896 - 36165800
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| ||||||| || |||||||||  |||| ||||||||||| ||||||||||||    
T  36165896 gattatataatccgaactgtatcagcacaaattgtaaacatgtttgtaacatggatagttattttagagacaatattaatcttcttaactctcatcc 36165800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 217 - 367
Target Start/End: Original strand, 1076603 - 1076751
Alignment:
Q  217 gattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgttt 316  Q
    ||||||||||| ||||| ||||  |||||| | |||||||||||||||||||| |  |||||||||| ||| ||||| |||||||||| |||||||||||    
T  1076603 gattatataatccgaacacccct-aaacacttattttcaagggaaaaacagttcaatttatataatccgaattgtat-agcacaaattttaaacatgttt 1076700  T
Q  317 ataacatgaattgttattttatggacagtattaatcttcctaactctcatc 367  Q
     ||||||||||    |||||||||||| ||||||||||| || ||||||||    
T  1076701 gtaacatgaatatccattttatggacaatattaatcttcatagctctcatc 1076751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 9073605 - 9073701
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||| | ||||||||| |||||||||||||||||||||| ||||||| || || |||||| ||||| ||||||||||||||| ||||||||    
T  9073605 gattatataacccgaactgtattagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaagtctcatcc 9073701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 272 - 365
Target Start/End: Original strand, 7982479 - 7982572
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctca 365  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||| |||||| ||| || |||||| ||||| |||||||||||| ||||||||    
T  7982479 gattatataatctgaactgtatcggcacaaattttgaacatgtttgtaacataaatagtcattttaaggacaatattaatcttcccaactctca 7982572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 263 - 368
Target Start/End: Complemental strand, 11698383 - 11698278
Alignment:
Q  263 aacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactc 362  Q
    |||||||  |||||||||||  |||||||||||||| ||||||||| ||||||| ||||||| || || |||||| ||| | ||||||||||||||||||    
T  11698383 aacagttcggattatataattcgaactgtatcagcagaaattctaagcatgtttttaacatggatagtcattttagggataatattaatcttcctaactc 11698284  T
Q  363 tcatcc 368  Q
    ||||||    
T  11698283 tcatcc 11698278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 278 - 367
Target Start/End: Original strand, 40328004 - 40328093
Alignment:
Q  278 ataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatc 367  Q
    ||||| |||| |||||||||| |||| |||||||||||| ||||||| ||||| |||||||||| | |||||||||||||||||||||||    
T  40328004 ataatttgaattgtatcagcataaatactaaacatgtttgtaacatggattgtcattttatggataatattaatcttcctaactctcatc 40328093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 273 - 368
Target Start/End: Original strand, 28423523 - 28423618
Alignment:
Q  273 attatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||||||||| ||||  ||||||||||||||||||| ||||||| ||    ||||||  |||| ||||||||||||||||||||||||    
T  28423523 attatataatctgaactgcatcactacaaattctaaacatgtttgtaacatggatgaacattttacagacaatattaatcttcctaactctcatcc 28423618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 36317836 - 36317988
Alignment:
Q  216 ggattatataattcgaacgccccacaaacacct-tttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatg- 313  Q
    |||||||| |||||||||  |||  |||||||  ||||| |||||||||||||||  |||||||||||||||||||||| |||||||||| | ||||||     
T  36317836 ggattatagaattcgaacaacccctaaacacccattttttaagggaaaaacagttcggattatataatctgaactgtattagcacaaattgtgaacatgt 36317935  T
Q  314 ---tttataacatgaattgttattttatggacagtattaatcttcctaactct 363  Q
       ||| ||||||| ||  | |||||| ||||| |||||||||| ||||||||    
T  36317936 taatttgtaacatggataatcattttaaggacaatattaatctttctaactct 36317988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 368
Target Start/End: Original strand, 33472372 - 33472475
Alignment:
Q  265 cagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctc 364  Q
    ||||| |||||| ||||||  ||||| |||| ||| |||||| ||||||||| ||||||| || || |||||| ||||| ||||||||||||||||| ||    
T  33472372 cagttcagattacataatccaaactgcatcatcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactatc 33472471  T
Q  365 atcc 368  Q
    ||||    
T  33472472 atcc 33472475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 368
Target Start/End: Complemental strand, 10833567 - 10833477
Alignment:
Q  278 ataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||| |||| | |||||| |||||| ||||||||| ||||||| || || |||||| ||||| ||||||||||||||||| ||||||    
T  10833567 ataatctggactgcaccagcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactttcatcc 10833477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 362
Target Start/End: Complemental strand, 31519950 - 31519860
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactc 362  Q
    |||||||||||| ||||||||||||||||||| ||||| ||  || ||||||| || |  |||||| ||||| ||||||||||||||||||    
T  31519950 gattatataatccgaactgtatcagcacaaatcctaaatataattgtaacatgtatagccattttagggacaatattaatcttcctaactc 31519860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 366
Target Start/End: Original strand, 6395154 - 6395279
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| ||| |||||  | |||||||||||| || ||||||||||| |||||  ||| | ||| || |||| ||  | |||||||||    
T  6395154 aaacaccctttttcaaggaaaagacagtgcaaattatataatcttaattgtatcagcaccaattccgaacttttttgtagcatggatattcattttatgg 6395253  T
Q  341 acagtattaatcttcctaactctcat 366  Q
    ||| |||||| |||||||||||||||    
T  6395254 acaatattaaacttcctaactctcat 6395279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 368
Target Start/End: Original strand, 33472195 - 33472268
Alignment:
Q  295 agcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||| |||||| ||||||||| ||||||| || || |||||| ||||| ||||||||||||||||||||||||    
T  33472195 agcaccaattcttaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctcatcc 33472268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 368
Target Start/End: Complemental strand, 31234554 - 31234480
Alignment:
Q  294 cagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||| |||||| ||||| ||| ||||||| || || |||||| ||||| |||||||||||||||||| |||||    
T  31234554 cagcaccaattctgaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaactcccatcc 31234480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 368
Target Start/End: Original strand, 7981618 - 7981711
Alignment:
Q  275 tatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||| ||||||||||||| || |||||||| | ||||||||| ||||||| ||  |||||||| ||||| | ||||  |||||||| |||||||    
T  7981618 tatagaatctgaactgtaccaacacaaattttgaacatgtttgtaacatggatatttattttaaggacaatgttaagtttcctaaccctcatcc 7981711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 9845323 - 9845379
Alignment:
Q  308 aacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctc 364  Q
    ||||||||| ||||||| || || |||||| ||||| ||||||||||||||||||||    
T  9845323 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctc 9845379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 368
Target Start/End: Original strand, 21004503 - 21004581
Alignment:
Q  290 gtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||| |||||| |||||||| ||| ||||||| || |  |||||| ||||| ||||||||||| ||||||| ||||    
T  21004503 gtatcagtacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcataactcttatcc 21004581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 8621759 - 8621710
Alignment:
Q  241 aaacaccttttttcaaggg-aaaaacagtttagattatataatctgaact 289  Q
    ||||||| | ||||||||| |||||||||| |||||||||||||||||||    
T  8621759 aaacaccctatttcaaggggaaaaacagttaagattatataatctgaact 8621710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 368
Target Start/End: Original strand, 36980689 - 36980766
Alignment:
Q  291 tatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||||| | ||||||||| ||||||| ||  | |||||| ||||| |||| ||||| |||||||| ||||    
T  36980689 tatcagcacaaattatgaacatgtttgtaacatggataatcattttaaggacaatattgatctttctaactcttatcc 36980766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 24627697 - 24627761
Alignment:
Q  294 cagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttccta 358  Q
    |||||| |||||| || |||||| ||||||| || || |||||| ||||| ||||||||||||||    
T  24627697 cagcaccaattctgaatatgtttgtaacatggatagtcattttaaggacaatattaatcttccta 24627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 32504361 - 32504309
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatg 324  Q
    ||||||||||| |||||| |||||||||||||| | || |||||| |||||||    
T  32504361 gattatataatatgaactatatcagcacaaattttgaatatgtttgtaacatg 32504309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 5e-38; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 216 - 368
Target Start/End: Complemental strand, 38977861 - 38977710
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| ||||| ||||  ||||  |||||||||||||||||| |||| ||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  38977861 ggattacataatccgaaaaccccctaaacaccttttttcaaggtaaaa-cagttcaaattatataatccgaactgtatcagcacaaattataaacatgtt 38977763  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | ||||||| || || |||||||||||| ||||||||||||||||||||||||    
T  38977762 tgtaacatggatagtcattttatggacaatattaatcttcctaactctcatcc 38977710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 241 - 367
Target Start/End: Original strand, 50716323 - 50716448
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| || ||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||| ||    
T  50716323 aaacaccctttttcaaggtaaaa-caattcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttaggg 50716421  T
Q  341 acagtattaatcttcctaactctcatc 367  Q
    ||| |||||||||||||||||||||||    
T  50716422 acaatattaatcttcctaactctcatc 50716448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 241 - 367
Target Start/End: Complemental strand, 50796524 - 50796399
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| || ||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||| ||    
T  50796524 aaacaccctttttcaaggtaaaa-caattcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttaggg 50796426  T
Q  341 acagtattaatcttcctaactctcatc 367  Q
    ||| |||||||||||||||||||||||    
T  50796425 acaatattaatcttcctaactctcatc 50796399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 216 - 368
Target Start/End: Original strand, 51258448 - 51258601
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| ||||| ||||| ||||  ||||||| |||||||||||||||||| |||  ||||||||||| |||||||||||||||||||| ||||||||||    
T  51258448 ggattacataatccgaacaccccctaaacaccatttttcaagggaaaaacaatttgaattatataatccgaactgtatcagcacaaattttaaacatgtt 51258547  T
Q  316 tataacatgaattgttattttatgg-acagtattaatcttcctaactctcatcc 368  Q
    ||||||||| || || |||||| || ||| ||||||||||| ||||||||||||    
T  51258548 tataacatggatagtcattttagggaacaatattaatcttcataactctcatcc 51258601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 33438592 - 33438718
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| || || |||||| ||    
T  33438592 aaacaccatttttcaaggtaaaa-cagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttaggg 33438690  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  33438691 acaatattaatcttcctaactctcatcc 33438718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 3902894 - 3902768
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||  | |||||||||    
T  3902894 aaacaccctttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatgatcattttatgg 3902796  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||| ||||||||||||    
T  3902795 acaatattaatcttcataactctcatcc 3902768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 216 - 366
Target Start/End: Complemental strand, 3352179 - 3352030
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| |||||||| |  ||||  ||||||| ||| |||||| |||| |||||   |||||||||||||||||||||||||||||||||||||||||||    
T  3352179 ggattacataattcggaaaccccctaaacaccctttatcaaggtaaaa-cagttcgaattatataatctgaactgtatcagcacaaattctaaacatgtt 3352081  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcat 366  Q
    | ||||||| || || |||||| ||||| ||||||||||||||||||||||    
T  3352080 tgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 3352030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 501228 - 501103
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    |||||||||||||||||| |||| |||||  |||||||||||| ||||||||| |||||||||||||||||||||| ||| ||| || || |||||||||    
T  501228 aaacaccttttttcaaggtaaaa-cagttc-gattatataatccgaactgtataagcacaaattctaaacatgtttgtaaaatggatagtcattttatgg 501131  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| |||||||||||||| |||||||||    
T  501130 acaatattaatcttcctagctctcatcc 501103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 34821431 - 34821305
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| ||||  ||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||  || || |||||||||    
T  34821431 aaacaccatttttcaaggtaaaat-agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttatgg 34821333  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||| | ||||||    
T  34821332 acaatattaatcttcctaaatttcatcc 34821305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 51540702 - 51540576
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  ||||||||||||||||  ||||||||||||||||||||||||||| |||| || || || |||||| ||    
T  51540702 aaacaccgtttttcaaggtaaaa-cagttcggattatataatctgaatagtatcagcacaaattctaaacatgtttgtaacttggatagtcattttaggg 51540604  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  51540603 acaatattaatcttcctaactctcatcc 51540576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 246 - 368
Target Start/End: Original strand, 51492874 - 51492996
Alignment:
Q  246 ccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagt 345  Q
    ||||||| ||| ||| ||||||||  |||| ||||||| ||||||||  |||||||||||||| ||||||| ||| |||||| ||||||||||||||| |    
T  51492874 cctttttccaacggagaaacagttcggattttataatccgaactgtactagcacaaattctaatcatgtttgtaatatgaatagttattttatggacaat 51492973  T
Q  346 attaatcttcctaactctcatcc 368  Q
    |||||||||||||||||||||||    
T  51492974 attaatcttcctaactctcatcc 51492996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 261 - 366
Target Start/End: Original strand, 28873095 - 28873200
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||  || || |||||| ||||| ||||||||||| ||||    
T  28873095 aaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttagggacaatattaatcttcttaac 28873194  T
Q  361 tctcat 366  Q
    ||||||    
T  28873195 tctcat 28873200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 368
Target Start/End: Complemental strand, 5128012 - 5127861
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||||||||| ||||| || |  |||||| | |||||||||||||||||||| || |||||||||||||| |||||||||| ||||| ||||||||||    
T  5128012 ggattatataatccgaacacctct-aaacacttattttcaagggaaaaacagttcagtttatataatctgaattgtatcagcataaattttaaacatgtt 5127914  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | ||||||| ||    |||||||||||| ||||||||||| || |||||||||    
T  5127913 tgtaacatggatatccattttatggacaatattaatcttcatagctctcatcc 5127861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 30721893 - 30721772
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||      | | |||||| ||    
T  30721893 aaacaccatttttcaagggaaaaatagttcagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaac------tctcattttaggg 30721800  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||| ||||    
T  30721799 acaatattaatcttcctaactcttatcc 30721772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 261 - 368
Target Start/End: Original strand, 35142164 - 35142271
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||||||  ||||||||||| |||| |||||||||||||||||||||||||||| ||||||| || || ||||||  |||| ||||||||||||||||    
T  35142164 aaaacagttcggattatataatatgaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaaagacaatattaatcttcctaac 35142263  T
Q  361 tctcatcc 368  Q
    ||||||||    
T  35142264 tctcatcc 35142271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 47740020 - 47739894
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| ||||   |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  || || |||| | ||    
T  47740020 aaacaccctttttcaaggtaaaatt-gttttgattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcatttaaggg 47739922  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||| ||||||||||||    
T  47739921 acaatattaatcttcataactctcatcc 47739894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 246 - 368
Target Start/End: Original strand, 52777307 - 52777428
Alignment:
Q  246 ccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagt 345  Q
    ||||||||||||| |||| |||||  ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| || |  |||||| ||||| |    
T  52777307 ccttttttcaaggtaaaa-cagttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaacatgtatagccattttagggacaat 52777405  T
Q  346 attaatcttcctaactctcatcc 368  Q
    |||||||||| ||||||| ||||    
T  52777406 attaatcttcttaactcttatcc 52777428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 368
Target Start/End: Complemental strand, 49096307 - 49096188
Alignment:
Q  249 tttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg-acagtat 347  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||||||||||| ||||||||||| ||||||  || || |||||| || ||| |||    
T  49096307 tttttcaagg-aaaaacagtttgaattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatagatagtcattttagggaacaatat 49096209  T
Q  348 taatcttcctaactctcatcc 368  Q
     ||||||||||||||||||||    
T  49096208 aaatcttcctaactctcatcc 49096188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 360
Target Start/End: Complemental strand, 27143504 - 27143386
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||||||||| | |||||||||||||| ||||||||||||||||||| ||||||||| ||||||| || ||||||||| ||    
T  27143504 aaacaccctttttcaagg-aaaaacagttcaaattatataatctgatctgtatcagcacaaattctgaacatgtttgtaacatggatagttattttaagg 27143406  T
Q  341 acagtattaatcttcctaac 360  Q
    | | ||||||  ||||||||    
T  27143405 ataatattaagattcctaac 27143386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 216 - 366
Target Start/End: Complemental strand, 47980120 - 47979970
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||||| |||  |||| ||||  |||||| ||||||||| |||||||||||    ||||||||||| |||||||||||||||||||| | ||||| ||    
T  47980120 ggattatagaatctgaacaccccctaaacactttttttcaatggaaaaacagtcacaattatataatccgaactgtatcagcacaaattttgaacatatt 47980021  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcat 366  Q
    ||||||||  || || |||||| ||||| |||||||||| |||||||||||    
T  47980020 tataacatagatagtcattttaaggacaatattaatctttctaactctcat 47979970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 368
Target Start/End: Original strand, 29048388 - 29048539
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||||| ||| ||||| ||||  ||||| | |||||||||||||||||| || ||||||||||||| ||||| ||||| |||||||||| || |||||    
T  29048388 ggattatagaatccgaacaccccctaaacatcctttttcaagggaaaaacaattcagattatataatcggaactatatcaacacaaattctgaatatgtt 29048487  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | ||||||| |  ||||||||| ||| | ||||||||||| ||||||| ||||    
T  29048488 tgtaacatg-acagttattttaaggataatattaatcttcataactcttatcc 29048539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 368
Target Start/End: Original strand, 47123140 - 47123223
Alignment:
Q  285 gaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||||||||||||||||||||||| ||||||| ||  | |||||| ||||| ||||||||||||||||||||||||    
T  47123140 gaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatcc 47123223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 45712162 - 45712053
Alignment:
Q  252 ttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaat 351  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||| | | ||||||| ||||||| ||  | ||||||  |||  |||||||    
T  45712162 ttcaagggaaaaacagttcggattatataatctgaactgtatcagcacaaattatgatcatgtttgtaacatggataatcattttaaagaccatattaat 45712063  T
Q  352 cttcctaact 361  Q
    ||||||||||    
T  45712062 cttcctaact 45712053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 273 - 368
Target Start/End: Complemental strand, 43473026 - 43472931
Alignment:
Q  273 attatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||| ||||||| || |  |||||| ||||| ||||||||||||||||||| ||||    
T  43473026 attatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatattaatcttcctaactcttatcc 43472931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 368
Target Start/End: Original strand, 47130506 - 47130589
Alignment:
Q  285 gaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||||||||||||||||||||||| ||||||| |   | |||||| ||||| ||||||||||||||||||||||||    
T  47130506 gaactgtatcagcacaaattctaaacatgtttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatcc 47130589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 2358680 - 2358584
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||| |||||||||||||| |||| |||||||| ||| ||||||| || |  |||||| ||||| ||||||||||||||||||| ||||    
T  2358680 gattatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcc 2358584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 39149880 - 39150006
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  | |||||||||| ||||| |||||||||||||| ||||||||||| ||||||   | || ||||||  |    
T  39149880 aaacaccatttttcaaggtaaaa-cagttcgggttatataatccgaactctatcagcacaaattttaaacatgtttgtaacattggtagtcattttagag 39149978  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||| ||||||||||||||||    
T  39149979 acaatattaattttcctaactctcatcc 39150006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 258 - 367
Target Start/End: Original strand, 29035885 - 29035995
Alignment:
Q  258 ggaaaaacagtttagattatataatctgaactgt-atcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcc 356  Q
    ||||||||||||   ||||||||||||||||||| |||| |||||||||||| ||||||| ||||||| ||  | |||||| ||||  ||||| ||||||    
T  29035885 ggaaaaacagttcgaattatataatctgaactgttatcaacacaaattctaagcatgtttgtaacatggataatcattttaaggaccatattactcttcc 29035984  T
Q  357 taactctcatc 367  Q
    |||||||||||    
T  29035985 taactctcatc 29035995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 3937480 - 3937563
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttc 355  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||| ||||||| ||    |||||||||||| |||||||||||    
T  3937480 gattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttatggacaatattaatcttc 3937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 365
Target Start/End: Complemental strand, 26053579 - 26053485
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg-acagtattaatcttcctaactctca 365  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||||| || || || |||||| || ||| || |||||||||||| |||||    
T  26053579 gattatataatccaaactgtatcaacacaaattctaaacatgtttataacttggatagtcattttagggaacaatactaatcttcctaattctca 26053485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 46622853 - 46622801
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatg 313  Q
    |||||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  46622853 aaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatg 46622801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 14828991 - 14828881
Alignment:
Q  258 ggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcct 357  Q
    ||||||| ||||| |||||||||||| ||| | ||| | | ||||||||||| |||||||||||||| ||  | |||||| ||| | ||||||||||| |    
T  14828991 ggaaaaaaagtttggattatataatccgaaatatattaacgcaaattctaaatatgtttataacatggataataattttaaggataatattaatcttcat 14828892  T
Q  358 aactctcatcc 368  Q
    ||| |||||||    
T  14828891 aaccctcatcc 14828881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 304
Target Start/End: Original strand, 11266313 - 11266401
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaatt 304  Q
    |||||||| |||| ||||  |||  ||||||| |||||||||| ||||||||| |  ||||||||||| ||||||||||| ||||||||    
T  11266313 ggattatagaatttgaactgcccctaaacaccctttttcaaggaaaaaacagtctgcattatataatccgaactgtatcaacacaaatt 11266401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 324
Target Start/End: Complemental strand, 43420244 - 43420136
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||||| ||| | ||| ||||| ||||||| || |||||| |||| ||| ||| |||||||||||| ||| ||||||| |||||||| | |||| |||    
T  43420244 ggattatagaatccaaacaccccataaacacccttattcaagagaaatacaatttggattatataatcagaattgtatcaacacaaattatgaacacgtt 43420145  T
Q  316 tataacatg 324  Q
    | |||||||    
T  43420144 tgtaacatg 43420136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 47302121 - 47302173
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatg 324  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||| |||||||    
T  47302121 gattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatg 47302173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 368
Target Start/End: Original strand, 46624855 - 46624917
Alignment:
Q  306 taaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||| |||||| ||||||| || || |||||||||| | ||||||||||||||||||||||||    
T  46624855 taaatatgtttgtaacatgtatagtcattttatggaaaatattaatcttcctaactctcatcc 46624917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 364
Target Start/End: Complemental strand, 512306 - 512214
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctc 364  Q
    |||||||| ||||||| |||||||  ||||||| | ||||||||||||||||| || || ||||||  |||  ||||||| ||| ||||||||    
T  512306 gattatatcatctgaattgtatcaatacaaattatgaacatgtttataacatggatagtcattttaaagaccatattaatattcataactctc 512214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 8735309 - 8735373
Alignment:
Q  294 cagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttccta 358  Q
    |||||| |||||| ||||||||||||||||| || || |||||| ||||| ||||||| ||||||    
T  8735309 cagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatattccta 8735373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 9087550 - 9087614
Alignment:
Q  294 cagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttccta 358  Q
    |||||| |||||| ||||||||||||||||| || || |||||| ||||| ||||||| ||||||    
T  9087550 cagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatattccta 9087614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 337
Target Start/End: Original strand, 29035784 - 29035880
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttatttta 337  Q
    ||||||| || || |||||||||||||||  |||||||||||  ||| ||||| |  ||||||||| ||||||||| ||||||| || || ||||||    
T  29035784 aaacacccttatttaagggaaaaacagttcggattatataattcgaattgtatgaatacaaattctgaacatgtttgtaacatggatagtcatttta 29035880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 35345931 - 35345871
Alignment:
Q  308 aacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||| ||||||| || || |||||||||||| ||||||| || |||||||||||||    
T  35345931 aacatgtttgtaacatggatagtcattttatggacaatattaatatttctaactctcatcc 35345871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 8735530 - 8735590
Alignment:
Q  308 aacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||| ||||||  || || |||||| ||||| ||||||||||||||||| ||||||    
T  8735530 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatcc 8735590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 9087771 - 9087831
Alignment:
Q  308 aacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||| ||||||  || || |||||| ||||| ||||||||||||||||| ||||||    
T  9087771 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatcc 9087831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 33842132 - 33842036
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||| ||||||| || || |||  ||| |||| ||||||||||| ||| ||| || || |||||| ||||| ||||||| ||| ||||||||||||    
T  33842132 gattacataatctaaattgcatcgacaccaattttaaacatgtttgtaatatggatagtcattttaaggacaatattaatgttcgtaactctcatcc 33842036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 5e-38; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 216 - 368
Target Start/End: Complemental strand, 41203295 - 41203143
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| ||||| ||||| ||||  ||||||| ||||| ||| ||||||||||| ||||||||||| | |||||||||||||||||||| ||||||||||    
T  41203295 ggattacataatccgaacaccccgtaaacaccctttttaaagagaaaaacagttcagattatataaaccgaactgtatcagcacaaattttaaacatgtt 41203196  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | ||||||| || || |||||||||||| ||||||||||||||||| ||||||    
T  41203195 tgtaacatggatagtcattttatggacaatattaatcttcctaactttcatcc 41203143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 216 - 368
Target Start/End: Original strand, 8388696 - 8388848
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||||||||| | ||| ||||  ||||||  ||||| |||| |||||||||| |||||||||| || ||| ||||||||||||||||||||| |||||    
T  8388696 ggattatataatcctaacaccccttaaacactcttttttaaggaaaaaacagttcagattatatagtccgaaatgtatcagcacaaattctaaagatgtt 8388795  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | ||||||| ||||  || ||||||||| ||||||||||||||||||||||||    
T  8388796 tgtaacatggattgccatcttatggacaatattaatcttcctaactctcatcc 8388848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 34517171 - 34517298
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||   ||||||| || || ||||||||     
T  34517171 aaacaccatttttcaagggaaaaacagtttggattatataatccgaactgtatcagcacaaattctaaacatgtcggtaacatggatagtcattttatga 34517270  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| |||||||| || ||||| ||||||    
T  34517271 acaatattaatcatcataactttcatcc 34517298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 45153874 - 45153748
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||||||||||||||| |||||||||||||||||| || ||||||||||| ||||||| || || |||||| ||    
T  45153874 aaacaccctttttcaaggtaaaa-cagtttagattatataatttgaactgtatcagcacaagttataaacatgtttgtaacatggatagtcattttaggg 45153776  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||| ||||||||||||    
T  45153775 acaatattaatcttcttaactctcatcc 45153748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 216 - 366
Target Start/End: Original strand, 5507464 - 5507614
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||||||||| ||||| ||||  ||||||||||| | |||| ||||| ||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  5507464 ggattatataatccgaacaccccctaaacaccttttcttaaggaaaaaatagttcggattatataatccgaactgtatcagcacaaattctaaacatgtt 5507563  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcat 366  Q
    | ||||||| || || |||||||  ||| |||||||||||  |||||||||    
T  5507564 tgtaacatggatagtcattttataaacaatattaatcttcacaactctcat 5507614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 32187952 - 32187826
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| |||||||||||||||||||| |||| |||||| ||||||| || || |||||| ||    
T  32187952 aaacaccatttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttaggg 32187854  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  32187853 acaatattaatcttcctaactctcatcc 32187826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 44465810 - 44465684
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| ||| |||||||||||||||||||||||||||| |||||||  | || |||||| ||    
T  44465810 aaacaccctttttcaaggtaaaa-cagttcggattatataatccgaaatgtatcagcacaaattctaaacatgtttgtaacatggttagtcattttaggg 44465712  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  44465711 acaatattaatcttcctaactctcatcc 44465684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 261 - 366
Target Start/End: Complemental strand, 17474863 - 17474758
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||||||| |||||||||||| |||||||||||||||||||| ||||||||||| ||||||| || || ||||||  |||| ||||||||||||||||    
T  17474863 aaaacagtttggattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttcctaac 17474764  T
Q  361 tctcat 366  Q
    ||||||    
T  17474763 tctcat 17474758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 241 - 366
Target Start/End: Complemental strand, 33452526 - 33452402
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| ||||||||| |||||||||||||||||||||| ||||||| ||  | |||||| ||    
T  33452526 aaacaccctttttcaaggtaaaa-cagttcggattatataatccgaactgtattagcacaaattctaaacatgtttgtaacatggataatcattttaggg 33452428  T
Q  341 acagtattaatcttcctaactctcat 366  Q
    ||| ||||||||||||||||||||||    
T  33452427 acaatattaatcttcctaactctcat 33452402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 41510481 - 41510386
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||| || || |||||| ||||| ||||||||||||||||||||||||    
T  41510481 gattatataatctgaactgtatcagcacaatttctaaacatgtttgtaacatg-atagtcattttagggacaatattaatcttcctaactctcatcc 41510386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 367
Target Start/End: Complemental strand, 15995221 - 15995071
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| ||||| ||||  ||||  ||||||| |||||||||  |||| |||||  |||||||||||  |||||||||||||| ||||||||||||||||    
T  15995221 ggattacataatccgaaaaccccctaaacaccctttttcaagctaaaa-cagttcggattatataattcgaactgtatcagcaaaaattctaaacatgtt 15995123  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatc 367  Q
    | ||||||| || || |||||||||||| |||||||||| ||||||||||||    
T  15995122 tgtaacatggatagtcattttatggacaatattaatctttctaactctcatc 15995071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 235 - 368
Target Start/End: Original strand, 39447227 - 39447359
Alignment:
Q  235 ccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttatt 334  Q
    ||||| ||||||| |||||||||| ||||  ||||  |||||||||||   ||||||||||||||||||||||||||||||| ||||||| || || |||    
T  39447227 ccccataaacaccctttttcaaggtaaaat-agttcggattatataattcaaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatt 39447325  T
Q  335 ttatggacagtattaatcttcctaactctcatcc 368  Q
    |||  |||| ||||||||||||||||||||||||    
T  39447326 ttaaagacaatattaatcttcctaactctcatcc 39447359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 261 - 368
Target Start/End: Complemental strand, 36949009 - 36948902
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||| ||||| ||||||||||||  |||||||||||||||||| |||||||| ||||||||||| || | ||||||| ||||| ||||||||||||||||    
T  36949009 aaaatagtttggattatataatccaaactgtatcagcacaaatcctaaacatatttataacatgtatagctattttagggacaatattaatcttcctaac 36948910  T
Q  361 tctcatcc 368  Q
    ||| ||||    
T  36948909 tcttatcc 36948902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 364
Target Start/End: Original strand, 42894448 - 42894570
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| ||||   ||||||||| || |||||||||||||||||||||||||||||||| ||||||| ||  | |||||| ||    
T  42894448 aaacaccatttttcaaggtaaaa-cagtccggattatatattccgaactgtatcagcacaaattctaaacatgtttctaacatggataatcattttaggg 42894546  T
Q  341 acagtattaatcttcctaactctc 364  Q
    ||| ||||||||||||||||||||    
T  42894547 acaatattaatcttcctaactctc 42894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 41854982 - 41854861
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  ||||||||||| ||||||||||||||||||||||||||||||||| ||     ||| || |||| | ||    
T  41854982 aaacaccctttttcaaggtaaaa-cagttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgta-----aatagtcatttcaggg 41854889  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  41854888 acaatattaatcttcctaactctcatcc 41854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 19110098 - 19109972
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| ||||||||||||||||  |||  ||||||||||||  |||| |||||||||||||| |||| || ||| ||||||| || || |||||| ||    
T  19110098 aaacaccctttttcaagggaaaaattgttc-gattatataatccaaactatatcagcacaaattttaaatatctttgtaacatggatcgtcattttaagg 19110000  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    | | ||||||||||||||||||||||||    
T  19109999 ataatattaatcttcctaactctcatcc 19109972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 242 - 368
Target Start/End: Original strand, 36875057 - 36875182
Alignment:
Q  242 aacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgga 341  Q
    |||||| |||||||||| |||| ||||   ||||||||||||  |||||||| |||| |||||||||||| |||| ||||||| || || |||||| |||    
T  36875057 aacaccatttttcaaggtaaaa-cagtccggattatataatccaaactgtattagcataaattctaaacaagtttgtaacatggatagtcattttaggga 36875155  T
Q  342 cagtattaatcttcctaactctcatcc 368  Q
     | ||||||||||||||||||||||||    
T  36875156 taatattaatcttcctaactctcatcc 36875182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 236 - 365
Target Start/End: Complemental strand, 38066762 - 38066633
Alignment:
Q  236 cccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattt 335  Q
    |||| |||||||  |||||||||||||||||||| | ||||||||| | |||| |||| | ||||||||||||| |||||| ||| ||| || || ||||    
T  38066762 cccataaacaccccttttcaagggaaaaacagttcatattatataaaccgaacagtattaacacaaattctaaatatgtttgtaaaatggatagtcattt 38066663  T
Q  336 tatggacagtattaatcttcctaactctca 365  Q
    || ||||| ||||||||||| | |||||||    
T  38066662 taaggacaatattaatcttcattactctca 38066633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 12885497 - 12885447
Alignment:
Q  256 agggaaaaacagtttagattatataatctgaactgtatcagcacaaattct 306  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  12885497 agggaaaaacagttcagattatataatctgaattgtatcagcacaaattct 12885447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 364
Target Start/End: Complemental strand, 25217815 - 25217736
Alignment:
Q  285 gaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctc 364  Q
    ||||||||| |||||||||||||||||||||| || |||| || || |||||  ||||| | ||||||||||||||||||    
T  25217815 gaactgtattagcacaaattctaaacatgtttgtagcatggatagtcattttggggacaattttaatcttcctaactctc 25217736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 327
Target Start/End: Original strand, 41204013 - 41204088
Alignment:
Q  252 ttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaat 327  Q
    |||| |||||| ||||||  ||| |||||||||||||||||||| |||||||||| ||||||||| |||| |||||    
T  41204013 ttcaggggaaagacagttcggataatataatctgaactgtatcaacacaaattctgaacatgtttgtaacttgaat 41204088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 17766882 - 17766786
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||| ||||||| ||||  |||| ||| |||| | ||||||||| ||||||  || || |||||| ||||| ||||||||||||||||||||||||    
T  17766882 gattacataatctaaacttcatcaacaccaattttgaacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactctcatcc 17766786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 367
Target Start/End: Original strand, 30763689 - 30763845
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||||||||| ||||| |||   ||||||| ||||||||  |||||||||||  ||||||||| ||  || ||||||| || ||||||||||||| ||    
T  30763689 ggattatataatccgaacaccctt-aaacaccatttttcaaaagaaaaacagttctgattatatattccaaattgtatcaacataaattctaaacatttt 30763787  T
Q  316 t------ataacatgaattgttattttatggacagtattaatcttcctaactctcatc 367  Q
    |      |  ||||  || || |||||||||||| |||||||||||||||||||||||    
T  30763788 tggtgttaacacatagatagtcattttatggacaatattaatcttcctaactctcatc 30763845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 33833842 - 33833888
Alignment:
Q  258 ggaaaaacagtttagattatataatctgaactgtatcagcacaaatt 304  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  33833842 ggaaaaacagttcagattatataatccgaactgtatcatcacaaatt 33833888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 45293743 - 45293776
Alignment:
Q  273 attatataatctgaactgtatcagcacaaattct 306  Q
    ||||||||||||||||||||||||||||||||||    
T  45293743 attatataatctgaactgtatcagcacaaattct 45293776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 16750480 - 16750386
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||  |||||||||||||| ||||||| || |||||| ||| ||| || || |||||| | ||| |||||||||| |||||||||||||    
T  16750480 gattatataattcgaactgtatcagcataaattct-aatatgtttgtaatatggatagtcattttaggaacaatattaatctt-ctaactctcatcc 16750386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 27900741 - 27900673
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatct 284  Q
    |||||||| ||||||||| ||||  ||||||| || |||| |||||||||||||  |||||||||||||    
T  27900741 ggattataaaattcgaacaccccctaaacacccttcttcaggggaaaaacagttcggattatataatct 27900673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 304
Target Start/End: Complemental strand, 13704920 - 13704834
Alignment:
Q  217 gattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaatt 304  Q
    ||||||| ||| ||||| |||| |||||||| |||||||   |||||||| || |||||||||||| ||||||| | |||||||||||    
T  13704920 gattatagaatccgaacacccc-caaacaccctttttcagatgaaaaacaattcagattatataatttgaactgcaccagcacaaatt 13704834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 304
Target Start/End: Complemental strand, 27900666 - 27900635
Alignment:
Q  273 attatataatctgaactgtatcagcacaaatt 304  Q
    ||||||||||||||||||||||||||||||||    
T  27900666 attatataatctgaactgtatcagcacaaatt 27900635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 34519561 - 34519494
Alignment:
Q  301 aattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||| ||||||||| ||||||| ||  | |||||| ||||| ||||||||||||||||| ||||||    
T  34519561 aattctgaacatgtttgtaacatggataatcattttaaggacaatattaatcttcctaactttcatcc 34519494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 35251000 - 35251065
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattct 306  Q
    ||||||| || ||||||| ||||||| || | |||||||||||  |||||||| ||||||||||||    
T  35251000 aaacacccttattcaaggaaaaaacaattcatattatataatccaaactgtattagcacaaattct 35251065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 217 - 368
Target Start/End: Complemental strand, 32842084 - 32841932
Alignment:
Q  217 gattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgttt 316  Q
    ||||| ||||| ||||| ||||| ||||||| |||||||||||||||||||||  |||||||||||  ||| |||||||||||||||| |||||||||||    
T  32842084 gattacataatccgaacaccccataaacaccctttttcaagggaaaaacagttcggattatataattcgaattgtatcagcacaaattttaaacatgttt 32841985  T
Q  317 ataacatgaattgttattttatgg-acagtattaatcttcctaactctcatcc 368  Q
     ||||||| || || |||||| || ||| ||||||||||||||||||||||||    
T  32841984 gtaacatggatagtcattttagggaacaatattaatcttcctaactctcatcc 32841932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 20891646 - 20891772
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||| ||    
T  20891646 aaacaccctttttcaaggtaaaa-cagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 20891744  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    | | ||||||||||||||||||||||||    
T  20891745 ataatattaatcttcctaactctcatcc 20891772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 246 - 367
Target Start/End: Complemental strand, 37183864 - 37183744
Alignment:
Q  246 ccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagt 345  Q
    ||||||||||||| |||| |||| | |||||||||||||||||||||||| ||||||||||||| |||||| ||||||| || || |||||||||||| |    
T  37183864 ccttttttcaaggcaaaa-cagtctggattatataatctgaactgtatcaacacaaattctaaatatgtttgtaacatggatagtcattttatggacaat 37183766  T
Q  346 attaatcttcctaactctcatc 367  Q
    ||||||||||||||||||||||    
T  37183765 attaatcttcctaactctcatc 37183744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 38871704 - 38871830
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||| |||||||||||| |||| |||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || |||||| ||    
T  38871704 aaacatcttttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 38871802  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| || |||||||||||||||||||||    
T  38871803 acaataataatcttcctaactctcatcc 38871830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 217 - 368
Target Start/End: Complemental strand, 40613788 - 40613637
Alignment:
Q  217 gattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgttt 316  Q
    ||||||| |||||||||  |||| ||||||| ||||| |||||||||||||||  |||||||||||| ||||||||| |||| ||||| | |||||||||    
T  40613788 gattatagaattcgaacatcccataaacaccattttttaagggaaaaacagttcggattatataatccgaactgtatgagcaaaaattatgaacatgttt 40613689  T
Q  317 ataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
     ||||||| ||  |||||||| ||||| ||||||||||||||||| ||||||    
T  40613688 gtaacatggataattattttaaggacattattaatcttcctaactttcatcc 40613637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 216 - 366
Target Start/End: Original strand, 26095099 - 26095249
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| ||||| ||||| ||||| ||||||  |||||||| ||||||| ||||  |||||||||||||||| ||||||| || ||||||||||||||||    
T  26095099 ggattacataatccgaacaccccataaacactctttttcaaaggaaaaatagttcggattatataatctgaattgtatcaacataaattctaaacatgtt 26095198  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcat 366  Q
    | ||||||| || || || ||||||||| ||||||||||| ||||||||||    
T  26095199 tgtaacatggatagtcatattatggacaatattaatcttcttaactctcat 26095249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 29862645 - 29862771
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||   ||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || |||||| ||    
T  29862645 aaacaccatttttcaaggtaaaa-cagttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 29862743  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||| ||||||    
T  29862744 acaatattaatcttcctaactttcatcc 29862771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 261 - 368
Target Start/End: Complemental strand, 31929193 - 31929087
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| ||||||| || || |||||| ||||| ||||||||||||||||    
T  31929193 aaaacagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcatttta-ggacaatattaatcttcctaac 31929095  T
Q  361 tctcatcc 368  Q
    ||||||||    
T  31929094 tctcatcc 31929087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 261 - 368
Target Start/End: Original strand, 33487662 - 33487769
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||||| |||||| ||||||| || || |||||| ||||| ||||||||||||||||    
T  33487662 aaaacagttcggattatataatccgaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 33487761  T
Q  361 tctcatcc 368  Q
    ||||||||    
T  33487762 tctcatcc 33487769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 261 - 363
Target Start/End: Original strand, 15957801 - 15957903
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||  || || |||||| ||||| ||||||||||||||||    
T  15957801 aaaacagtttggattatataatctgaactgtatcagtacaaattctaaacatgtttgtaacatagatagtaattttagggacaatattaatcttcctaac 15957900  T
Q  361 tct 363  Q
    |||    
T  15957901 tct 15957903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 241 - 367
Target Start/End: Complemental strand, 31221427 - 31221302
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  ||||||||||||  ||||||||||||||||||| ||||||||||| ||||||| || || |||||| ||    
T  31221427 aaacaccctttttcaaggtaaaa-cagttcggattatataatccaaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttaggg 31221329  T
Q  341 acagtattaatcttcctaactctcatc 367  Q
    ||| |||||||||||||||||||||||    
T  31221328 acaatattaatcttcctaactctcatc 31221302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 216 - 366
Target Start/End: Original strand, 38372317 - 38372466
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| |||||||| |  ||||  ||| ||| |||||||||| |||| ||||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  38372317 ggattacataattcggaaaccccttaaataccctttttcaaggtaaaa-cagttcagattatataatccgaactgtattagcacaaattctaaacatgtt 38372415  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcat 366  Q
    | | ||||| || || |||||| ||||| ||||||||||||||||||||||    
T  38372416 tgttacatggatagtcattttagggacaatattaatcttcctaactctcat 38372466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 368
Target Start/End: Original strand, 15799233 - 15799384
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| ||||| ||||  ||||  ||||||| |||||||| | |||| || || ||||||||||||| |||||||||||||||||||||||||||||||    
T  15799233 ggattacataatccgaaaaccccctaaacaccctttttcaacgtaaaa-catttcagattatataatccgaactgtatcagcacaaattctaaacatgtt 15799331  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | ||||||| || || |||||||||||| ||||| ||||||||| || |||||    
T  15799332 tgtaacatggatagtcattttatggacaatattattcttcctaattcgcatcc 15799384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 273 - 368
Target Start/End: Original strand, 7884257 - 7884352
Alignment:
Q  273 attatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||| ||| ||||| |||||| ||||| ||||||||||||||||||||||||    
T  7884257 attatataatctgaactgtatcaacacaaattctaaatatgtttgtaatatgtattgtcattttagggacaatattaatcttcctaactctcatcc 7884352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 241 - 367
Target Start/End: Complemental strand, 38692871 - 38692746
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||  | |||||| ||    
T  38692871 aaacaccctttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttaagg 38692773  T
Q  341 acagtattaatcttcctaactctcatc 367  Q
    ||| ||||||| ||| |||||||||||    
T  38692772 acaatattaatattcataactctcatc 38692746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 360
Target Start/End: Original strand, 13908555 - 13908699
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    ||||||||||||| |||| || |  ||||||  |||||||||||||||||||||  |||||||||||| ||| ||||||| || ||||| ||||||||||    
T  13908555 ggattatataatttgaacacctcctaaacactctttttcaagggaaaaacagttcggattatataatccgaattgtatcaacataaattttaaacatgtt 13908654  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    | ||||| | || || |||||||||||| ||||||||||| ||||    
T  13908655 tgtaacacggatagtcattttatggacaatattaatcttcttaac 13908699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 368
Target Start/End: Original strand, 39524784 - 39524935
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| |||||||| |  ||||  ||||||| |||||||||| |||| |||||  |||||||||||| ||||||||||| |||||||||||||||| ||    
T  39524784 ggattacataattcggaaaccccctaaacaccctttttcaaggtaaaa-cagttcggattatataatccgaactgtatcatcacaaattctaaacatatt 39524882  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | ||| ||| || || |||||| | ||| ||||||||||||||||||||||||    
T  39524883 tgtaatatgtatagtcattttaggaacaatattaatcttcctaactctcatcc 39524935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 4064808 - 4064682
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||   ||||||||||| ||||| |||||||||||||||||||||||||| ||||||| || || |||||| ||    
T  4064808 aaacaccctttttcaaggtaaaa-cagttcgaattatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 4064710  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| | ||||||||||||||| ||||||    
T  4064709 acaatgttaatcttcctaactatcatcc 4064682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 26093478 - 26093605
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||| ||||||| |||| |||||||||||||  |||| |||||||| ||||| | ||||||||| ||||||| || || |||||||||    
T  26093478 aaacaccatttttcaatggaaaaatagttcagattatataatcctaactatatcagcataaattatgaacatgtttctaacatggatagtcattttatgg 26093577  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    |||  |||||||||| ||||||||||||    
T  26093578 acaaaattaatcttcttaactctcatcc 26093605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 6156794 - 6156890
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||  ||| |||||||||| ||||||||||||||||| ||||||| || || |||||| ||||| ||||||||||||||||||||||||    
T  6156794 gattatataatacgaattgtatcagcataaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcc 6156890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 364
Target Start/End: Original strand, 12847482 - 12847598
Alignment:
Q  248 ttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtat 347  Q
    |||||||||| |||||||||||  | ||| |||||| |||||||||||||||||||||| ||||||||| ||||||  ||  | |||||||||||| |||    
T  12847482 ttttttcaagtgaaaaacagttcggtttaaataatccgaactgtatcagcacaaattctgaacatgtttgtaacatagataatcattttatggacaatat 12847581  T
Q  348 taatcttcctaactctc 364  Q
    ||||||||| |||||||    
T  12847582 taatcttcccaactctc 12847598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 366
Target Start/End: Original strand, 23269375 - 23269494
Alignment:
Q  250 ttttcaagggaaaaacagtttagattatataatctgaactgtatcagca---caaattctaaacatgtttataacatgaattgttattttatggacagta 346  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||| ||   ||| |||| ||||||||| |||||||||   | |||||| ||||| ||    
T  23269375 ttttcaagggaaaaacagttcagattatataatccgaactttatcatcatcacaacttctgaacatgtttgtaacatgaacaatcattttaaggacaata 23269474  T
Q  347 ttaatcttcctaactctcat 366  Q
    ||||||||||||||||||||    
T  23269475 ttaatcttcctaactctcat 23269494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 28083436 - 28083340
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||| ||||||| || || |||||| ||||| |||||||||| |||||| ||||||    
T  28083436 gattatataatccgaactgtatcagcacaaattataaacatatttgtaacatggatagtcattttagggacaatattaatctttctaactttcatcc 28083340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 352
Target Start/End: Original strand, 25747077 - 25747168
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatc 352  Q
    |||||||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || |||||| |||||  |||||||    
T  25747077 aaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaacattaatc 25747168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 1350421 - 1350316
Alignment:
Q  218 attatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgttta 317  Q
    |||||||||| ||||| ||||  ||||| |||||||||||||||||||||||  |||||||||||   |||| ||||| ||||||||||||||||||||     
T  1350421 attatataatccgaacacccct-aaacatcttttttcaagggaaaaacagttcggattatataattcaaactatatcaacacaaattctaaacatgtttg 1350323  T
Q  318 taacatg 324  Q
    |||||||    
T  1350322 taacatg 1350316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 271 - 368
Target Start/End: Complemental strand, 40620049 - 40619952
Alignment:
Q  271 agattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||||| ||| |||||||| |||||||||||||||| || ||||||| |   | |||||| ||||| ||||||||||||||||||||||||    
T  40620049 agattatataatccgaattgtatcagtacaaattctaaacatgcttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatcc 40619952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 27158147 - 27158243
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||||||||||||||||||||||||| | |||||||||  |||||| || || |||||| ||||| |||||| ||||||||  |||||||    
T  27158147 gattatataatctgaactgtatcagcacaaattatgaacatgtttgaaacatggatagtcattttaaggacaatattaagcttcctaatcctcatcc 27158243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 365
Target Start/End: Complemental strand, 24203758 - 24203649
Alignment:
Q  256 agggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttc 355  Q
    |||| |||||||||  | |||||||||| |||||||||||||| ||||||||||||||||| ||||  | ||  | |||||| ||||| ||||||| |||    
T  24203758 agggtaaaacagttcgggttatataatccgaactgtatcagcataaattctaaacatgtttgtaactgggataatcattttaaggacaatattaatgttc 24203659  T
Q  356 ctaactctca 365  Q
    ||||||||||    
T  24203658 ctaactctca 24203649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 289 - 368
Target Start/End: Original strand, 14111947 - 14112026
Alignment:
Q  289 tgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||||||| |||| |||||| ||||||| || || |||||| ||||| ||||||||||||||||| ||||||    
T  14111947 tgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatcc 14112026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 323
Target Start/End: Original strand, 18514809 - 18514916
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||||| |||| || | ||||  ||||||| || |||| ||||||||||||| |||||||||||||||||| | |||| ||||||||||||  |||||    
T  18514809 ggattatagaatttgatcaccccctaaacacccttattcaggggaaaaacagttcagattatataatctgaaccgcatcatcacaaattctaagtatgtt 18514908  T
Q  316 tataacat 323  Q
    | ||||||    
T  18514909 tgtaacat 18514916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 368
Target Start/End: Original strand, 27212742 - 27212863
Alignment:
Q  242 aacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgga 341  Q
    |||||| ||||| |||||||||||||||  |||||||||||  ||||| |||||| ||||||| ||||||||||| ||||||  || |     | ||| |    
T  27212742 aacaccctttttgaagggaaaaacagttcggattatataattcgaactatatcagtacaaattataaacatgtttgtaacatagatag-----tcatgaa 27212836  T
Q  342 cagtattaatcttcctaactctcatcc 368  Q
    || ||||||||||||||||||||||||    
T  27212837 caatattaatcttcctaactctcatcc 27212863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 306
Target Start/End: Complemental strand, 41639603 - 41639517
Alignment:
Q  220 tatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattct 306  Q
    |||| ||| ||||| ||||| | |||| |||||||| |  ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  41639603 tatagaatccgaacaccccaaacacactttttttcaggtaaaaaacagtttggattatataatccgaactgtatcagcacaaattct 41639517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 8739043 - 8738947
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||| ||||||  ||||| |||| ||| |||||| ||||||||| ||||||| || || |||||| | ||| ||||||||||||||||||||||||    
T  8739043 gattacataatccaaactgcatcaacaccaattctgaacatgtttgtaacatggatagtcattttaagaacaatattaatcttcctaactctcatcc 8738947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 363
Target Start/End: Complemental strand, 26190356 - 26190265
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactct 363  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||| ||||||| || |  |||||| ||| | | ||||| |||||||||||    
T  26190356 gattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggataattttaatattcctaactct 26190265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 368
Target Start/End: Complemental strand, 8739224 - 8739150
Alignment:
Q  294 cagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||| |||||| ||||||||| |||||||  | || |||||| ||||| ||||||||||||||||||||||||    
T  8739224 cagcaccaattctgaacatgtttgtaacatgggtagtcattttaaggacaatattaatcttcctaactctcatcc 8739150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 11186289 - 11186199
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattct 306  Q
    |||||||| |||||||||  |||| || ||||  ||||||  ||||||||| ||| |||||||||||| |||||||||||||| |||||||    
T  11186289 ggattatagaattcgaacatcccataatcacccattttcagaggaaaaacactttggattatataatccgaactgtatcagcataaattct 11186199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 368
Target Start/End: Original strand, 21070428 - 21070525
Alignment:
Q  271 agattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||||  ||||| ||||| ||||||||| ||||| ||| ||||||  || || |||||| ||||| ||||||||||| |||| |||||||    
T  21070428 agattatataatccaaactgaatcagtacaaattctgaacatatttgtaacatagatagtcattttaaggacaatattaatcttcataaccctcatcc 21070525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 368
Target Start/End: Complemental strand, 6800997 - 6800889
Alignment:
Q  260 aaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaa 359  Q
    |||||||||| | |||||||||| ||||||||||||||| ||||| | |||||||||  |||||| |  || |||||| ||||| |  |||||||||| |    
T  6800997 aaaaacagttcaaattatataatttgaactgtatcagcataaattatgaacatgtttgcaacatggacagtcattttaaggacaatgctaatcttcctca 6800898  T
Q  360 ctctcatcc 368  Q
     ||||||||    
T  6800897 ttctcatcc 6800889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 9439568 - 9439480
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaatt 304  Q
    |||||||| ||||||||| ||||  ||||| | || ||||||||||||||| || | ||||| ||||||||| |||||||| |||||||    
T  9439568 ggattatagaattcgaacaccccttaaacatccttattcaagggaaaaacaattcaaattatgtaatctgaattgtatcagaacaaatt 9439480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 368
Target Start/End: Original strand, 16429365 - 16429441
Alignment:
Q  292 atcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||| |||||| ||||||||| |||||||||| ||  ||||| ||||| |||||||||||| |||||| ||||    
T  16429365 atcagcaccaattctgaacatgtttgtaacatgaatagtcgttttaaggacaatattaatcttccaaactcttatcc 16429441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 368
Target Start/End: Complemental strand, 28445247 - 28445171
Alignment:
Q  292 atcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||| ||| |||||| ||||||||| ||||||| || ||  ||||| ||||| ||||||||||||||||||||||||    
T  28445247 atcaacaccaattctgaacatgtttgtaacatgtatggtcgttttaaggacaatattaatcttcctaactctcatcc 28445171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 368
Target Start/End: Complemental strand, 8973670 - 8973571
Alignment:
Q  269 ttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||  |||||| ||||||| | |||| |||| | ||||||||| ||||||| ||  | |||||| ||||| |||||| |||||||||||||||||    
T  8973670 ttagattacgtaatcttaactgtacccgcaccaattttgaacatgtttgtaacatggataatcattttaaggacaatattaaccttcctaactctcatcc 8973571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 27494189 - 27494123
Alignment:
Q  294 cagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||| |||||||||||| ||| ||||||| || || |||||| ||||| ||||||||||||||||    
T  27494189 cagcaccaattctaaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaac 27494123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 367
Target Start/End: Original strand, 34530279 - 34530373
Alignment:
Q  273 attatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatc 367  Q
    |||| |||||||||||   | |||||| |||||| ||||||||| |||||||  | || |||||| ||||| ||||||||||||||||| |||||    
T  34530279 attacataatctgaacaacaccagcactaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttcctaactttcatc 34530373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 368
Target Start/End: Complemental strand, 12465154 - 12465081
Alignment:
Q  295 agcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||| |||||||| ||| ||| ||| || ||||||||| ||||| ||||||||||| ||||||| ||||    
T  12465154 agcacaaatcctaaacatatttgtaatatgtatagttattttagggacaatattaatcttcataactcttatcc 12465081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 25968362 - 25968414
Alignment:
Q  252 ttcaagggaaaa-acagtttagattatataatctgaactgtatcagcacaaat 303  Q
    |||||||||||| |||||||  |||||||||||||||| ||||||||||||||    
T  25968362 ttcaagggaaaaaacagtttgaattatataatctgaaccgtatcagcacaaat 25968414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 14001724 - 14001778
Alignment:
Q  248 ttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaa 302  Q
    ||||| || ||| ||||||||| ||||||||||||| ||||||||| ||||||||    
T  14001724 tttttgcagggggaaaacagttcagattatataatccgaactgtattagcacaaa 14001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 4028056 - 4028003
Alignment:
Q  252 ttcaagggaaaaacagtttagattatat-aatctgaactgtatcagcacaaatt 304  Q
    ||||||||||||||||||  |||||||| |||| ||| ||||||||||||||||    
T  4028056 ttcaagggaaaaacagttcggattatataaatccgaattgtatcagcacaaatt 4028003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 33901010 - 33901054
Alignment:
Q  260 aaaaacagtttagattatataatctgaactgtatcagcacaaatt 304  Q
    ||||||||||| ||||||||  |||||| ||||||||||||||||    
T  33901010 aaaaacagtttggattatattttctgaattgtatcagcacaaatt 33901054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 368
Target Start/End: Original strand, 34530156 - 34530192
Alignment:
Q  332 attttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  34530156 attttaaggacagtattaatcttcctaactttcatcc 34530192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 5e-35; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 241 - 368
Target Start/End: Original strand, 17000449 - 17000575
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| ||||||  |||||||||||||| ||||||||||||||||||||||||||||| ||||||| || || |||||| ||    
T  17000449 aaacaccatttttcaaggtaaaa-cagtttgaattatataatctgagctgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 17000547  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  17000548 acaatattaatcttcctaactctcatcc 17000575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 28866719 - 28866592
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| ||||||| || |  |||||||||    
T  28866719 aaacaccctttttaaagggaaaaacagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagccattttatgg 28866620  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| | ||||||||| ||||||||||||    
T  28866619 acatttttaatcttcataactctcatcc 28866592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 216 - 368
Target Start/End: Original strand, 34006305 - 34006458
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| |||||| |||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||  || ||||| |||||||||| |||| |||||    
T  34006305 ggattacataatttgaacaccccataaacaccctttttcaagggaaaaacagttcagattatataatccaaattgtattagcacaaattttaaagatgtt 34006404  T
Q  316 tataacatgaattgttattttatgg-acagtattaatcttcctaactctcatcc 368  Q
    | ||||||| || || |||||| || ||| ||||||||||||||||||||||||    
T  34006405 tgtaacatggatagtcattttagggaacaatattaatcttcctaactctcatcc 34006458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 32817699 - 32817573
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||||||| ||||||||||||||||||| |||||||||||| ||||||| || || |||||| ||    
T  32817699 aaacaccctttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacaaatcctaaacatgtttgtaacatggatagtcattttaggg 32817601  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| |||||||||||||||||| |||||    
T  32817600 acaatattaatcttcctaactcccatcc 32817573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 241 - 367
Target Start/End: Complemental strand, 3561424 - 3561298
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| ||||||||||||||||| |||   ||||||||||| |||||||||||||||||||| | ||||||||| ||||||  || || |||||| ||    
T  3561424 aaacaccctttttcaagggaaaaacggttcgaattatataatccgaactgtatcagcacaaattatgaacatgtttgtaacatagatagtaattttaagg 3561325  T
Q  341 acagtattaatcttcctaactctcatc 367  Q
    |||||||||||||| ||||||||||||    
T  3561324 acagtattaatctttctaactctcatc 3561298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 243 - 367
Target Start/End: Original strand, 27794904 - 27795027
Alignment:
Q  243 acaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggac 342  Q
    ||||| |||||||||| ||||| ||||   ||||||||||||||||||||||||| |||||| ||||||||||||||||||  || || |||||||||||    
T  27794904 acaccctttttcaagg-aaaaatagttcgaattatataatctgaactgtatcagcgcaaattttaaacatgtttataacatagatagtcattttatggac 27795002  T
Q  343 agtattaatcttcctaactctcatc 367  Q
    | ||||||||||||||||| |||||    
T  27795003 aatattaatcttcctaactatcatc 27795027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 280 - 368
Target Start/End: Complemental strand, 41584715 - 41584627
Alignment:
Q  280 aatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||| |||||||||||||||||||||||||||||||| ||||||| || || |||||||||||| ||||||||||||||||||||||||    
T  41584715 aatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatcc 41584627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 40650763 - 40650637
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||| |||||  |||||||| |||||||||||||||||||||||| ||| ||||||| ||||||| ||  | |||||| ||    
T  40650763 aaacaccatttttcaaggtaaaa-cagttcggattatatgatctgaactgtatcagcacaaattataaccatgtttgtaacatggataatcattttaggg 40650665  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||||||||||||||||||    
T  40650664 acaatattaatcttcctaactctcatcc 40650637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 44573184 - 44573059
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    |||| ||||||||||||| ||||  ||||  |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| || |||||| ||    
T  44573184 aaactccttttttcaaggtaaaat-agttcggattatataatctgaactgtat-agcacaaattataaacatgtttgtaacatgaatagtcattttaggg 44573087  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| |||||||||| |||||||||||||    
T  44573086 acaatattaatctttctaactctcatcc 44573059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 242 - 368
Target Start/End: Complemental strand, 52744930 - 52744805
Alignment:
Q  242 aacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgga 341  Q
    ||||||||||||||||| |||| || ||  ||||| |||||||||||||||||||||||||| |||||||||||| ||||||| || || |||||| | |    
T  52744930 aacaccttttttcaaggtaaaa-caattcggattaaataatctgaactgtatcagcacaaatgctaaacatgtttgtaacatggatagtcattttaggaa 52744832  T
Q  342 cagtattaatcttcctaactctcatcc 368  Q
    ||  |||||||||||||||||||||||    
T  52744831 caacattaatcttcctaactctcatcc 52744805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 7011311 - 7011407
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||| |||||||||||||| ||||||||||||||||| ||||||| || || |||||| ||||| ||||||||||| ||||||||||||    
T  7011311 gattatataatccgaactgtatcagcaaaaattctaaacatgtttctaacatggatagtcattttagggacaatattaatcttcttaactctcatcc 7011407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 45046908 - 45046812
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||| ||||||| |||||||||||||||||||||||||||||||| ||||||| || || |||| | ||||| ||||||||||||||||||||||||    
T  45046908 gattgtataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttcagggacaatattaatcttcctaactctcatcc 45046812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 261 - 368
Target Start/End: Complemental strand, 15069910 - 15069803
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| || || ||||||  |||| |||||||||| |||||    
T  15069910 aaaacagttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttactaac 15069811  T
Q  361 tctcatcc 368  Q
    | ||||||    
T  15069810 tttcatcc 15069803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 241 - 362
Target Start/End: Complemental strand, 34162809 - 34162690
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| |||  |||||   ||||||||||| |||||||||||||||||||||||||||||||| ||||||| || |  |||||| ||    
T  34162809 aaacaccctttttcaaggtaaa--cagttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagccattttaggg 34162712  T
Q  341 acagtattaatcttcctaactc 362  Q
    ||| ||||||||||||||||||    
T  34162711 acaatattaatcttcctaactc 34162690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 261 - 366
Target Start/End: Original strand, 49677573 - 49677678
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaac 360  Q
    |||||||||  |||||||||||| |||||||||||||| ||||||||| ||||||| ||||||  || || |||||| ||||| ||||||||||||||||    
T  49677573 aaaacagttcggattatataatccgaactgtatcagcataaattctaaccatgtttgtaacatagatagtcattttagggacaatattaatcttcctaac 49677672  T
Q  361 tctcat 366  Q
    ||||||    
T  49677673 tctcat 49677678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 368
Target Start/End: Original strand, 42546041 - 42546164
Alignment:
Q  244 caccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggaca 343  Q
    |||| |||||||||| |||| |||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || ||||||  || |    
T  42546041 caccctttttcaaggtaaaa-cagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagagata 42546139  T
Q  344 gtattaatcttcctaactctcatcc 368  Q
     |||||||| | |||||||||||||    
T  42546140 atattaatcattctaactctcatcc 42546164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 216 - 367
Target Start/End: Complemental strand, 40908047 - 40907897
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    |||||| ||||| ||||  ||||  ||||||| |||||  | || |||||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  40908047 ggattacataatccgaaaaccccctaaacaccctttttttaaggtaaaacagttcggattatata-tctgaactgtatcagcacaaattctaaacatgtt 40907949  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatc 367  Q
    | ||||||| ||  | ||||||  |||| |||||||||||||||||| ||||    
T  40907948 tgtaacatggataatcattttagagacaatattaatcttcctaactcccatc 40907897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 366
Target Start/End: Complemental strand, 24472913 - 24472791
Alignment:
Q  244 caccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggaca 343  Q
    |||| |||||||||||||||||| ||  |||||||||||| ||||| ||| |||||||||| ||||||||||| ||||||| || || |||||| ||| |    
T  24472913 caccctttttcaagggaaaaacaattcggattatataatccgaactatattagcacaaattttaaacatgtttgtaacatggatagtcattttaaggaaa 24472814  T
Q  344 gtattaatcttcctaactctcat 366  Q
     |||||| |||||||||| ||||    
T  24472813 atattaagcttcctaactatcat 24472791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 368
Target Start/End: Original strand, 23442784 - 23442935
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtt 315  Q
    ||||||||||||||| |  |||| |||||| ||||||| |||| ||||  ||||  ||||||||||||  |||||||||||||||||| |||||||| ||    
T  23442784 ggattatataattcggaaaccccccaaacatctttttttaaggtaaaat-agttcggattatataatccaaactgtatcagcacaaatcctaaacatatt 23442882  T
Q  316 tataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    | ||||||| |  |  |||||| ||||| ||||||||||||||||||| ||||    
T  23442883 tgtaacatgtacagccattttagggacaatattaatcttcctaactcttatcc 23442935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 368
Target Start/End: Complemental strand, 45567940 - 45567852
Alignment:
Q  280 aatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||| || || |||||| ||||| |||||||||| |||||||||||||    
T  45567940 aatccgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatctttctaactctcatcc 45567852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 18583632 - 18583506
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||||||||| |||| ||||  ||||  ||||||||||||||||||||||| |||||||| |||||||| ||| ||||||| || |  |||||| ||    
T  18583632 aaacacctttttttaaggtaaaat-agttcggattatataatctgaactgtatcggcacaaatcctaaacatatttgtaacatgtatagccattttaggg 18583534  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| ||||||||| ||||||||| ||||    
T  18583533 acaatattaatctgcctaactcttatcc 18583506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 241 - 366
Target Start/End: Complemental strand, 8704607 - 8704482
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| | |||||||||||||| |||| ||||||||||||| ||||||||||| ||| | |||| |||||| ||||| |||| || || |||||| ||    
T  8704607 aaacaccatatttcaagggaaaaatagttcagattatataatccgaactgtatcaccaccagttctgaacatgattatatcatggatagtcattttaagg 8704508  T
Q  341 acagtattaatcttcctaactctcat 366  Q
    |   ||||||||||||||||| ||||    
T  8704507 atcttattaatcttcctaactatcat 8704482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 363
Target Start/End: Complemental strand, 26723595 - 26723455
Alignment:
Q  223 ataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataaca 322  Q
    ||||| ||||| ||||  ||||||| ||||| ||||||||||| |||  |||||||||||| ||||| ||||||||||||||  |||||||||| |||||    
T  26723595 ataatccgaacaccccctaaacacccttttttaagggaaaaacggttcggattatataatccgaactatatcagcacaaatttaaaacatgtttgtaaca 26723496  T
Q  323 tgaattgttattttatgg-acagtattaatcttcctaactct 363  Q
    || || || |||||| || ||| ||||||||||||| |||||    
T  26723495 tg-atagtcattttagggaacaatattaatcttccttactct 26723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 49786369 - 49786465
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||||  |||||||||||||||||| |||||| | ||| ||||||| || |  |||||||||||| ||||||||||||||||||| ||||    
T  49786369 gattatataatcctaactgtatcagcacaaatcctaaacttatttgtaacatgtatagccattttatggacaatattaatcttcctaactcttatcc 49786465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 304
Target Start/End: Complemental strand, 5210392 - 5210305
Alignment:
Q  217 gattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaatt 304  Q
    ||||||| ||| ||||| ||||  ||||||| ||||||| |||||||||| ||| |||||||||||||||| ||||||||||||||||    
T  5210392 gattatagaatccgaacaccccttaaacaccatttttcaggggaaaaacattttggattatataatctgaaatgtatcagcacaaatt 5210305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 33611468 - 33611372
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||| ||||||| || |  |||||| ||||| |||| |||||||||| ||| ||||    
T  33611468 gattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatatttatcttcctaaatcttatcc 33611372  T

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Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 314
Target Start/End: Original strand, 38885298 - 38885370
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgt 314  Q
    ||||||| |||||||||| |||| || ||  |||||||||||| ||||||||||||||||||||||||||||||    
T  38885298 aaacaccctttttcaaggtaaaa-catttcggattatataatccgaactgtatcagcacaaattctaaacatgt 38885370  T

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Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 368
Target Start/End: Complemental strand, 9446146 - 9446057
Alignment:
Q  279 taatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||| |||| ||| |||||| |||||| ||||||||||||||||| || || |||||| ||||| ||||||||||| || || ||||||    
T  9446146 taatccgaacagtaccagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatcttcttagctttcatcc 9446057  T

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Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 32542494 - 32542546
Alignment:
Q  272 gattatataatctgaactgtatcagcacaaattctaaacatgtttataacatg 324  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||| |||||||    
T  32542494 gattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatg 32542546  T

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Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 366
Target Start/End: Original strand, 42928953 - 42929079
Alignment:
Q  242 aacaccttttttcaagggaaaaaca--gtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatg 339  Q
    |||||| || ||||||||||||| |  |||  |||||||||||| | |||||||||| ||||||  | | ||||||||||||||| ||||  |||||| |    
T  42928953 aacacccttattcaagggaaaaaaactgttcggattatataatccggactgtatcagtacaaatcatgagcatgtttataacatgtattgccattttaag 42929052  T
Q  340 gacagtattaatcttcctaactctcat 366  Q
    |||  ||||||| ||| ||||||||||    
T  42929053 gaccatattaattttcttaactctcat 42929079  T

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Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 361
Target Start/End: Original strand, 890587 - 890704
Alignment:
Q  244 caccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggaca 343  Q
    ||||||||||||  |||||| |||||  |||||||| ||| ||| ||||||||||||||||||||   ||||| ||||||| ||    | |||| |||||    
T  890587 caccttttttcagtggaaaagcagttcggattatattatccgaaatgtatcagcacaaattctaagtctgtttgtaacatggataaccagtttaaggaca 890686  T
Q  344 gtattaatcttcctaact 361  Q
     ||||||||||| |||||    
T  890687 atattaatcttcataact 890704  T

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Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 6223850 - 6223783
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatc 283  Q
    |||||| ||||| ||||| ||||| ||||| | |||||||||| ||||||||||  ||||||||||||    
T  6223850 ggattacataatccgaacaccccataaacatcctttttcaaggtaaaaacagttcggattatataatc 6223783  T

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Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 25563487 - 25563440
Alignment:
Q  249 tttttcaagggaaaaacagtttagattatataatctgaactgtatcag 296  Q
    |||||||||||||||||||||  ||||||||||| |||||| ||||||    
T  25563487 tttttcaagggaaaaacagttcggattatataatatgaactttatcag 25563440  T

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Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 368
Target Start/End: Complemental strand, 9445922 - 9445848
Alignment:
Q  294 cagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||| |||||||||||| ||| || |||| || || |||||| ||| | | ||||||||||||||||||||||    
T  9445922 cagcaccaattctaaacatctttgtagcatggatagtcattttaaggagaatgttaatcttcctaactctcatcc 9445848  T

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Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 368
Target Start/End: Complemental strand, 43319016 - 43318942
Alignment:
Q  294 cagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    |||||| |||||| ||||||||| ||||||  || || |||||| | ||| ||||||||||||||||| ||||||    
T  43319016 cagcaccaattctgaacatgtttgtaacattgatagtcattttaagaacaatattaatcttcctaactttcatcc 43318942  T

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Target: scaffold0027 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 142051 - 141925
Alignment:
Q  241 aaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatgg 340  Q
    ||||||| |||||||||| ||||   ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || |||||| ||    
T  142051 aaacaccctttttcaaggtaaaatt-gttgagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 141953  T
Q  341 acagtattaatcttcctaactctcatcc 368  Q
    ||| |||||||||||||||||| |||||    
T  141952 acaatattaatcttcctaactcccatcc 141925  T

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Target: scaffold0508 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 235 - 368
Target Start/End: Complemental strand, 3489 - 3357
Alignment:
Q  235 ccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttatt 334  Q
    ||||| ||||||| |||||||||| |||| |||||  ||||||||||||||||||||||| || |||||||||||||||||| ||||||  ||  | |||    
T  3489 ccccataaacaccctttttcaaggtaaaa-cagttcggattatataatctgaactgtatcggcgcaaattctaaacatgtttgtaacatcgataatcatt 3391  T
Q  335 ttatggacagtattaatcttcctaactctcatcc 368  Q
    ||| ||||| ||||||||||| ||||||||||||    
T  3390 ttagggacaatattaatcttcgtaactctcatcc 3357  T

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Target: scaffold0137 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 9566 - 9476
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaat 351  Q
    |||||||||  |||||||||||| |||||||||||||| |||||||| |||||||| ||||||| || || |||||||||||| |||||||    
T  9566 aaaacagttcggattatataatccgaactgtatcagcataaattctatacatgtttgtaacatggatagtcattttatggacaatattaat 9476  T

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Target: scaffold0182 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 297 - 368
Target Start/End: Original strand, 23228 - 23299
Alignment:
Q  297 cacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||| |||||||||| ||||||| || || |||||| ||||| ||||||||||||||||||||||||    
T  23228 cacaaattcgaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcc 23299  T

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Target: scaffold0006 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 362
Target Start/End: Complemental strand, 60029 - 59938
Alignment:
Q  271 agattatataatctgaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactc 362  Q
    |||||||||||| ||||||||| ||||||||||| | ||||||||| ||||||  || || ||||||  |||| ||||||||||||||||||    
T  60029 agattatataatatgaactgtaccagcacaaattttgaacatgtttgtaacatagatagtcattttaaagacaatattaatcttcctaactc 59938  T

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Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 362
Target Start/End: Original strand, 59474 - 59551
Alignment:
Q  285 gaactgtatcagcacaaattctaaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactc 362  Q
    ||||| |||||| ||||||| ||||||||||| | ||||| || || |||||| ||||| |||||||||| |||||||    
T  59474 gaactatatcagtacaaattttaaacatgtttgtgacatggatagtcattttaaggacaatattaatctttctaactc 59551  T

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Target: scaffold0091 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 2177 - 2097
Alignment:
Q  216 ggattatataattcgaacgccccacaaacaccttttttcaagggaaaaacagtttagattatataatctgaactgtatcag 296  Q
    ||||| |||||| | ||| ||||| || | || ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  2177 ggattttataatccaaacaccccataatcgccctttttcaggggaaaaacagttcagattatataatctgaactgtatcag 2097  T

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Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 368
Target Start/End: Original strand, 140620 - 140682
Alignment:
Q  306 taaacatgtttataacatgaattgttattttatggacagtattaatcttcctaactctcatcc 368  Q
    ||||||||||| ||||||  || || |||||| ||||| ||||||||||||||||||||||||    
T  140620 taaacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatcc 140682  T

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Target: scaffold0564 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 304
Target Start/End: Original strand, 4461 - 4504
Alignment:
Q  261 aaaacagtttagattatataatctgaactgtatcagcacaaatt 304  Q
    ||||||| || ||||||||||||||||||||||| |||||||||    
T  4461 aaaacagattggattatataatctgaactgtatcggcacaaatt 4504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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