View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19069_low_32 (Length: 257)
Name: NF19069_low_32
Description: NF19069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19069_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 40634817 - 40635044
Alignment:
| Q |
13 |
cagactattctaaaactagcccatattcatattcatcagatagggatagacgaaaacaaatgtcaggagaacgtaagatgatacgttagataatttttgt |
112 |
Q |
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| T |
40634817 |
cagactattttaaaactagcccatattcatattcatcagatagggatagacgaaaacaaatgtcaggagaacgtaagatgatacgttagataatttttgt |
40634916 |
T |
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| Q |
113 |
gggagtgttggaatctgatttttagtttaattgaactttctagtcggtcaataatgcttcatcaaagaaaaagaaggcaaaagcaacaatccaatcataa |
212 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40634917 |
gggagtgttg-aatctgatttttagtttaattgaactttctagtcggtcaataatgcttcatcaaagaaaaagaaggcaaaagcaacaatccaatcataa |
40635015 |
T |
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| Q |
213 |
acatttccatttaatcgaatgagtagact |
241 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
40635016 |
acatttccatttaatcgaatgagtagact |
40635044 |
T |
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