View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19069_low_45 (Length: 226)
Name: NF19069_low_45
Description: NF19069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19069_low_45 |
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Alignment Details
Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 39230896 - 39230685
Alignment:
| Q |
1 |
ataacggttgctggtaatggagcagaaacaggagtggtaataacagaagaaattattgcagtgtttgtggttgattctctgtctcttgtgtaaatgagtg |
100 |
Q |
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| T |
39230896 |
ataactgttgctggtaatggtgcagaaacaggagtggtaataacagaagaaattattgcagtgtttgtggttgattctctgtctcttgtgtaaatgagtg |
39230797 |
T |
|
| Q |
101 |
ttgcaaggaatgctaaagtgagaattgatatgaatgctagaagccataatcgatttgagtttccttgtttttggatatatggatggagaagaatgagttt |
200 |
Q |
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| T |
39230796 |
ttgcaaggaatgctaaagtgagaattgatatgaatgctagaagccataatcgatttgagtttccttgtttttggatatatggatggagaagaatgagttt |
39230697 |
T |
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| Q |
201 |
tgtgttagtgtt |
212 |
Q |
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|||||||||||| |
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| T |
39230696 |
tgtgttagtgtt |
39230685 |
T |
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