View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19069_low_47 (Length: 211)
Name: NF19069_low_47
Description: NF19069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19069_low_47 |
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Alignment Details
Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 48023578 - 48023752
Alignment:
| Q |
14 |
tagcaaaggagaaatattttgactgaaagaaagaaaagnnnnnnnnnngaaggagaaatgcttaaactcatcgatgatagaaccaaactctttgttagct |
113 |
Q |
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| T |
48023578 |
tagcaaaggagaaatattttgactgaaagaaagaaa-----gaaaaaaaaaggagaaatgcttaaactcattgatgatagaaccaaactctttgttagct |
48023672 |
T |
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| Q |
114 |
gttaatgcaagtgttaacactgacacactcatgcccgtaacgactagttagcaaaattgatgcatttatgttggattttg |
193 |
Q |
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| T |
48023673 |
gttaatgcaagtgttaacactgacacactcatgcccgtaacgactagttagcaaaattgatgcatttatgttggattttg |
48023752 |
T |
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