View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19069_low_48 (Length: 210)
Name: NF19069_low_48
Description: NF19069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19069_low_48 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 210
Target Start/End: Complemental strand, 28122539 - 28122342
Alignment:
| Q |
13 |
acagatgaagagccaatttgtctatgagtaaggtcacatgccactgattgaatcccagaagtggttgatgttggggcatgatgatgagcagctaagtatt |
112 |
Q |
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| T |
28122539 |
acagatgaagagccaatttgtctatgagtaaggtcacatgccactgattgaatcccagcagtggttgatgttggggcatgatgatgagcagctaagtatt |
28122440 |
T |
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| Q |
113 |
gacgtggatcaatactggacctctgttgttgcatggagaatgaaggttgtcccattgagtcgaaaagtgtagacatatcataggtgaccggcatggtt |
210 |
Q |
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| T |
28122439 |
gacgtggatcaatactggacctctgttgttgcatggagaatgaaggttgtcccattgagtcgaaaagtgtagacatatcataggtgaccggcatggtt |
28122342 |
T |
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