View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19070_high_30 (Length: 236)
Name: NF19070_high_30
Description: NF19070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19070_high_30 |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 41608903 - 41608685
Alignment:
| Q |
1 |
aaattataagtaaaatgttcttgtatagatacacacaattgtgtagaggagggagctagggttgataattagggggttctnnnnnnnttaattgtattaa |
100 |
Q |
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| T |
41608903 |
aaattataagtaaaatgttcttgtatagatacacacaattgtgtagaggagggagctagggttgat--ttagggggttctaaaaaaattaattgtattaa |
41608806 |
T |
|
| Q |
101 |
agaagaagactttttggctattcaaacttgttaactaaatagtacatgaaaaatatgttgacttgcattccaatttaattcagtatttttattttgcaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||| |
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| T |
41608805 |
agaagaagactttttggctattcaaacttgttaactaaatagtacatgaaaaatatgttgacttgcattccaaattaattcaatattttcattttgcaat |
41608706 |
T |
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| Q |
201 |
tcaaaaaacatattaggtttt |
221 |
Q |
| |
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|||||||||||||||| |||| |
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| T |
41608705 |
tcaaaaaacatattagatttt |
41608685 |
T |
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