View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19074_high_11 (Length: 314)
Name: NF19074_high_11
Description: NF19074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19074_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 32505019 - 32504716
Alignment:
| Q |
1 |
aactgtagtaagttagtttaacaatgttggggaatgtaaatttaaggtatgattttgaaattttctataattgactcacaataggtcttactatttttag |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |
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| T |
32505019 |
aactgtagtaagttagtttaacaatgttggggaatgtaaatttaaggtatgattttgaaatttactgtaattgactcacaataggtcttactatttttag |
32504920 |
T |
|
| Q |
101 |
accctgttatgatgatagttttttatgagatagttactgctgatttgtatgcatgcaatttgtttaagcatgcaccatcgaccaacaattgaaagtatag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
32504919 |
accctgttatgatgatagttttttatgagatagttactgctgatttgtatgcatgcaatttgtttaagcatgcaccattgaccaacaattgaaagtatag |
32504820 |
T |
|
| Q |
201 |
cataggctttgtttataatttgtaacaatatatgatgatatatctaaattgacatgataatatttagttagtacctgctagcctcttttaattaccatca |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
32504819 |
cataggctttgtttataatttgtaacaatatatgatgatatatctaaattgacatgataatatttagttagtatctgctagcctcttttaattaccatca |
32504720 |
T |
|
| Q |
301 |
agtt |
304 |
Q |
| |
|
|||| |
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|
| T |
32504719 |
agtt |
32504716 |
T |
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