View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1907_high_14 (Length: 340)
Name: NF1907_high_14
Description: NF1907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1907_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 166; Significance: 8e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 36949443 - 36949257
Alignment:
| Q |
3 |
gaataagaaaaggtaacaaattaagtttgtatgttaagcttctatatgaatcaaagtccaaaaggttaattctccaagttctttagttaataatgggttg |
102 |
Q |
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| T |
36949443 |
gaataagaaaaggtaacaaattaagtttgtatgttaagcttctatatgaatcaaagtccaaaaggttaattctccaagttctttagttaat--gggtttg |
36949346 |
T |
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| Q |
103 |
tacagaacactgcaactccatgtgatgtacttcaaataaaaagtacagaactgagctcgttttatcataccgaccatatacagcttttt |
191 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36949345 |
tacagaacactgcaactccatgtgatatacttcaaataaaaagtacagaactgagctcgttttatcataccgaccatatacagcttttt |
36949257 |
T |
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