View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1907_high_39 (Length: 209)
Name: NF1907_high_39
Description: NF1907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1907_high_39 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 2467898 - 2467724
Alignment:
| Q |
17 |
atcaaagtgctttattggggttatagtcactacagacgtttcagtgaggagaattaggacaacatcataagataatcctaattattttactttccatgtt |
116 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
2467898 |
atcaaagtgctttattgggattatagtcactacagacgtttcagtgaagagaattaggacaacatcatgagataatcctgattattttactttccatgtt |
2467799 |
T |
|
| Q |
117 |
atttaatcttttctctatgtcaagataatatctctttgattaccttaagtattggaagttctttggaacttctta |
191 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
2467798 |
atttaatcttttctctatgtcaagataatatctctttgattaccttaagtattggaacttctttggaacttctta |
2467724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University