View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1907_high_9 (Length: 366)
Name: NF1907_high_9
Description: NF1907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1907_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 11 - 349
Target Start/End: Original strand, 15661939 - 15662277
Alignment:
| Q |
11 |
cacagagaaaactgtaaacatataaacaacggtatcggtaaaaatgcaagaacagaaataaaattaggaacccatttcaaaccatgataatatgttatgt |
110 |
Q |
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| T |
15661939 |
cacagagaaaactgtaaacatataaacaacggtatcggtaaaaatgcaagaacagaaataaaattaggaacccatttcaaaccatgataatatgttatgt |
15662038 |
T |
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| Q |
111 |
agaaagcactactaaatgctatcatcatgctgattatagacacaaacaatgccactagtccagatatcaacttcaaaggcagtgacttgagaaaatcttg |
210 |
Q |
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| T |
15662039 |
agaaagcactactaaatgctatcatcatgctgattatagacacaaacaatgccactagtccagatatcaacttcaaaggcagtgacttgagaaaatcttg |
15662138 |
T |
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| Q |
211 |
ctccgcatatcgcgagataaggatggatagaaatatcaagattgaagttgaagacgagataagtgccatggagtcggataaagcaaatacgaggaatgca |
310 |
Q |
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| T |
15662139 |
ctccgcatatcgcgagataaggatggatagaaatatcaagattgaagttgaagacgagataagtgccatggagtcggataaagcaaatacgaggaatgca |
15662238 |
T |
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| Q |
311 |
ggcttatctaaataattaggagattctgtgttatcattg |
349 |
Q |
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| T |
15662239 |
ggtttatctaaataattaggagattctttgttatcattg |
15662277 |
T |
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