View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1907_low_41 (Length: 209)
Name: NF1907_low_41
Description: NF1907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1907_low_41 |
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Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 2467898 - 2467724
Alignment:
| Q |
17 |
atcaaagtgctttattggggttatagtcactacagacgtttcagtgaggagaattaggacaacatcataagataatcctaattattttactttccatgtt |
116 |
Q |
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| T |
2467898 |
atcaaagtgctttattgggattatagtcactacagacgtttcagtgaagagaattaggacaacatcatgagataatcctgattattttactttccatgtt |
2467799 |
T |
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| Q |
117 |
atttaatcttttctctatgtcaagataatatctctttgattaccttaagtattggaagttctttggaacttctta |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
2467798 |
atttaatcttttctctatgtcaagataatatctctttgattaccttaagtattggaacttctttggaacttctta |
2467724 |
T |
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