View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19081_high_7 (Length: 205)
Name: NF19081_high_7
Description: NF19081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19081_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 35627343 - 35627517
Alignment:
| Q |
17 |
actctcaatctggaatatgcagacactgtctttagcatctttcttacagcaaaatggttggttactttttacgtgaagaaattaattacttcatatagag |
116 |
Q |
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| T |
35627343 |
actctcaatctggaatatgcagacactgtcattagcatctttcttacagcaaaatggttggttactttttacgtgaagaaattaattacttcatatagag |
35627442 |
T |
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| Q |
117 |
agtctaacacattttctattaacagcaaaagggccatcaatgcaacacactaaaagttttacacggaagaattat |
191 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
35627443 |
agtctaacacattttctattaacagcaaaagggtcatcaatgcaacacactaaaagttttacacggaagaattat |
35627517 |
T |
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