View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19082_low_4 (Length: 294)

Name: NF19082_low_4
Description: NF19082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19082_low_4
NF19082_low_4
[»] scaffold0088 (1 HSPs)
scaffold0088 (10-193)||(25904-26088)
[»] chr6 (36 HSPs)
chr6 (10-193)||(19285594-19285778)
chr6 (10-193)||(19787418-19787603)
chr6 (10-193)||(12166683-12166869)
chr6 (10-173)||(25471240-25471403)
chr6 (10-189)||(19876780-19876961)
chr6 (10-189)||(19882556-19882737)
chr6 (10-189)||(30270556-30270736)
chr6 (28-176)||(21794035-21794184)
chr6 (10-189)||(34641523-34641709)
chr6 (10-189)||(34648197-34648383)
chr6 (28-162)||(26419303-26419438)
chr6 (81-176)||(8761044-8761141)
chr6 (81-176)||(8768781-8768878)
chr6 (115-185)||(7428788-7428857)
chr6 (81-185)||(22757720-22757824)
chr6 (227-294)||(4340285-4340353)
chr6 (197-292)||(14072696-14072790)
chr6 (227-293)||(9517268-9517334)
chr6 (227-293)||(24478821-24478887)
chr6 (218-251)||(1635504-1635537)
chr6 (115-176)||(5295257-5295321)
chr6 (219-289)||(22412565-22412637)
chr6 (76-148)||(22906462-22906535)
chr6 (75-185)||(14616874-14616984)
chr6 (115-185)||(2707831-2707901)
chr6 (115-185)||(14595317-14595387)
chr6 (219-254)||(20005461-20005496)
chr6 (223-254)||(22813286-22813317)
chr6 (115-185)||(28707400-28707470)
chr6 (115-176)||(1592251-1592316)
chr6 (120-176)||(9623379-9623434)
chr6 (227-265)||(14638103-14638141)
chr6 (227-289)||(14722480-14722542)
chr6 (76-148)||(22905818-22905891)
chr6 (133-185)||(23236064-23236117)
chr6 (116-176)||(18316685-18316744)
[»] chr1 (34 HSPs)
chr1 (10-193)||(20046425-20046608)
chr1 (10-193)||(20053463-20053646)
chr1 (28-157)||(24076800-24076931)
chr1 (28-176)||(21541343-21541492)
chr1 (28-157)||(47483581-47483710)
chr1 (76-176)||(24109669-24109768)
chr1 (81-185)||(19858621-19858724)
chr1 (228-293)||(26021284-26021348)
chr1 (23-148)||(22448811-22448937)
chr1 (219-293)||(18528743-18528817)
chr1 (114-185)||(3707396-3707469)
chr1 (81-185)||(23196197-23196301)
chr1 (81-176)||(19852495-19852589)
chr1 (115-186)||(29555088-29555159)
chr1 (115-185)||(11944535-11944605)
chr1 (219-293)||(14780090-14780164)
chr1 (219-293)||(21449620-21449694)
chr1 (81-148)||(955656-955724)
chr1 (115-186)||(20838812-20838883)
chr1 (219-254)||(14781411-14781446)
chr1 (115-185)||(20824993-20825063)
chr1 (219-250)||(29242979-29243010)
chr1 (116-185)||(2341666-2341735)
chr1 (227-293)||(16179554-16179620)
chr1 (115-176)||(20032645-20032706)
chr1 (222-293)||(21666366-21666439)
chr1 (220-254)||(25403636-25403670)
chr1 (115-176)||(43631460-43631521)
chr1 (189-254)||(9402108-9402173)
chr1 (118-185)||(20942519-20942585)
chr1 (222-254)||(22623413-22623445)
chr1 (218-254)||(22664701-22664737)
chr1 (116-175)||(23711928-23711985)
chr1 (188-292)||(31235444-31235547)
[»] chr8 (33 HSPs)
chr8 (10-193)||(17053047-17053230)
chr8 (28-176)||(23824459-23824608)
chr8 (28-166)||(29327496-29327635)
chr8 (19-157)||(27889337-27889475)
chr8 (19-157)||(27947995-27948133)
chr8 (23-185)||(22176450-22176613)
chr8 (76-176)||(31419356-31419455)
chr8 (76-185)||(22064196-22064307)
chr8 (81-185)||(21281446-21281551)
chr8 (115-186)||(36601085-36601156)
chr8 (115-185)||(7302263-7302333)
chr8 (115-185)||(11773694-11773764)
chr8 (115-185)||(21322901-21322971)
chr8 (115-185)||(21327489-21327559)
chr8 (115-185)||(44494693-44494763)
chr8 (115-176)||(5239474-5239535)
chr8 (227-289)||(25226615-25226677)
chr8 (115-176)||(44430846-44430907)
chr8 (23-171)||(22026136-22026290)
chr8 (219-292)||(24110224-24110297)
chr8 (76-176)||(31412917-31413016)
chr8 (228-293)||(17997038-17997105)
chr8 (230-290)||(29381847-29381907)
chr8 (115-185)||(6609362-6609432)
chr8 (115-185)||(22248477-22248547)
chr8 (119-185)||(45136051-45136117)
chr8 (21-148)||(11252452-11252576)
chr8 (219-260)||(26394216-26394257)
chr8 (219-293)||(26831873-26831949)
chr8 (125-185)||(28852889-28852949)
chr8 (125-157)||(22989052-22989084)
chr8 (227-255)||(34497667-34497695)
chr8 (115-185)||(34949623-34949695)
[»] chr7 (45 HSPs)
chr7 (10-193)||(16928187-16928373)
chr7 (10-189)||(12592179-12592359)
chr7 (10-182)||(13005755-13005938)
chr7 (28-157)||(26295364-26295494)
chr7 (31-157)||(46173624-46173751)
chr7 (76-176)||(37244995-37245094)
chr7 (76-185)||(18959118-18959226)
chr7 (226-293)||(8978487-8978554)
chr7 (27-176)||(16946269-16946419)
chr7 (27-176)||(16952869-16953019)
chr7 (21-176)||(3902-4061)
chr7 (81-185)||(36306722-36306827)
chr7 (233-289)||(13759453-13759509)
chr7 (115-185)||(125250-125320)
chr7 (115-185)||(16185057-16185127)
chr7 (116-185)||(46349405-46349474)
chr7 (213-254)||(4819379-4819420)
chr7 (81-176)||(6411290-6411386)
chr7 (115-176)||(15338304-15338368)
chr7 (115-176)||(15711625-15711689)
chr7 (189-254)||(16058466-16058531)
chr7 (219-293)||(2348412-2348483)
chr7 (218-254)||(9131441-9131477)
chr7 (28-185)||(10305383-10305544)
chr7 (28-185)||(10305984-10306145)
chr7 (77-148)||(19599342-19599414)
chr7 (81-148)||(35963351-35963419)
chr7 (227-293)||(1847794-1847861)
chr7 (115-176)||(3290429-3290491)
chr7 (219-254)||(4449475-4449510)
chr7 (119-185)||(8775233-8775299)
chr7 (207-294)||(9574922-9575009)
chr7 (115-185)||(11395346-11395416)
chr7 (119-185)||(21744430-21744496)
chr7 (219-254)||(22066790-22066825)
chr7 (115-176)||(15723850-15723915)
chr7 (219-252)||(9731182-9731215)
chr7 (116-176)||(14583316-14583374)
chr7 (220-288)||(1588074-1588142)
chr7 (222-254)||(3190583-3190615)
chr7 (134-185)||(3327182-3327234)
chr7 (220-260)||(3735138-3735178)
chr7 (218-254)||(4786340-4786376)
chr7 (116-179)||(16476768-16476829)
chr7 (19-94)||(23518284-23518359)
[»] scaffold0125 (1 HSPs)
scaffold0125 (10-193)||(24744-24929)
[»] chr5 (27 HSPs)
chr5 (10-193)||(23526894-23527079)
chr5 (28-176)||(21676123-21676272)
chr5 (28-154)||(42242356-42242483)
chr5 (218-265)||(25401848-25401895)
chr5 (30-148)||(22378952-22379072)
chr5 (219-288)||(20315006-20315077)
chr5 (115-185)||(6728904-6728974)
chr5 (115-185)||(22759852-22759922)
chr5 (115-185)||(22880000-22880070)
chr5 (115-185)||(33474542-33474612)
chr5 (115-185)||(24669675-24669748)
chr5 (115-185)||(24739444-24739517)
chr5 (115-185)||(24752213-24752286)
chr5 (115-176)||(22509802-22509866)
chr5 (219-292)||(20549223-20549298)
chr5 (219-254)||(19008102-19008137)
chr5 (115-185)||(19075430-19075500)
chr5 (115-176)||(21661819-21661881)
chr5 (119-185)||(43120145-43120211)
chr5 (222-293)||(24140956-24141029)
chr5 (115-176)||(758899-758963)
chr5 (219-260)||(16523113-16523154)
chr5 (227-293)||(24659531-24659599)
chr5 (220-293)||(34488175-34488248)
chr5 (19-94)||(28260482-28260556)
chr5 (219-255)||(28665282-28665318)
chr5 (137-185)||(30344822-30344870)
[»] scaffold0730 (1 HSPs)
scaffold0730 (10-189)||(4306-4491)
[»] scaffold0148 (1 HSPs)
scaffold0148 (10-189)||(93-278)
[»] chr2 (33 HSPs)
chr2 (10-189)||(5707559-5707739)
chr2 (28-176)||(21133917-21134066)
chr2 (28-176)||(36799949-36800099)
chr2 (28-157)||(25590735-25590863)
chr2 (28-176)||(43692780-43692929)
chr2 (28-176)||(27368172-27368321)
chr2 (23-185)||(22809348-22809511)
chr2 (213-289)||(27541398-27541474)
chr2 (219-254)||(9761970-9762005)
chr2 (115-185)||(20964652-20964722)
chr2 (115-185)||(24503653-24503723)
chr2 (115-185)||(25036742-25036812)
chr2 (115-185)||(25040849-25040919)
chr2 (115-185)||(31754909-31754979)
chr2 (115-176)||(6031632-6031693)
chr2 (207-265)||(31804327-31804385)
chr2 (213-254)||(12950577-12950618)
chr2 (228-293)||(28929194-28929258)
chr2 (218-250)||(15339782-15339814)
chr2 (115-185)||(23061948-23062017)
chr2 (219-291)||(29143424-29143496)
chr2 (219-254)||(18121810-18121845)
chr2 (115-185)||(23029684-23029754)
chr2 (227-265)||(17198385-17198423)
chr2 (14-44)||(23169843-23169873)
chr2 (14-44)||(23581100-23581130)
chr2 (115-176)||(25108123-25108184)
chr2 (219-265)||(30412139-30412185)
chr2 (188-245)||(13776935-13776992)
chr2 (227-293)||(17635326-17635394)
chr2 (229-290)||(17743033-17743094)
chr2 (228-290)||(26667825-26667889)
chr2 (219-251)||(22379069-22379101)
[»] scaffold0693 (1 HSPs)
scaffold0693 (10-189)||(1484-1664)
[»] chr4 (43 HSPs)
chr4 (28-176)||(33096432-33096581)
chr4 (28-176)||(37880794-37880942)
chr4 (28-148)||(899027-899147)
chr4 (29-166)||(31664403-31664541)
chr4 (114-189)||(53482710-53482785)
chr4 (28-157)||(46045470-46045599)
chr4 (23-185)||(14479920-14480083)
chr4 (115-185)||(14062373-14062444)
chr4 (188-254)||(17217355-17217421)
chr4 (189-294)||(25095129-25095236)
chr4 (28-157)||(33198369-33198499)
chr4 (226-293)||(7582848-7582915)
chr4 (218-265)||(17336556-17336603)
chr4 (76-148)||(43286477-43286550)
chr4 (125-185)||(10687508-10687568)
chr4 (125-185)||(10901148-10901208)
chr4 (81-148)||(17000781-17000849)
chr4 (115-186)||(37839659-37839730)
chr4 (115-186)||(41939995-41940066)
chr4 (115-185)||(55503806-55503876)
chr4 (76-176)||(30395538-30395642)
chr4 (9-58)||(11846638-11846687)
chr4 (85-185)||(14697658-14697758)
chr4 (229-294)||(15165320-15165385)
chr4 (219-268)||(17025888-17025937)
chr4 (116-176)||(41529727-41529787)
chr4 (23-172)||(16220705-16220858)
chr4 (115-176)||(2585816-2585878)
chr4 (119-185)||(4169935-4170001)
chr4 (220-255)||(5679748-5679783)
chr4 (116-185)||(12931296-12931367)
chr4 (119-185)||(31132421-31132487)
chr4 (10-40)||(8056168-8056198)
chr4 (115-176)||(14484974-14485033)
chr4 (219-253)||(24638986-24639020)
chr4 (134-183)||(8833228-8833277)
chr4 (76-148)||(11171855-11171928)
chr4 (230-287)||(13909408-13909465)
chr4 (219-260)||(17710226-17710267)
chr4 (227-260)||(19605013-19605046)
chr4 (115-179)||(23725453-23725520)
chr4 (134-185)||(38982701-38982753)
chr4 (114-185)||(40908052-40908123)
[»] chr3 (27 HSPs)
chr3 (19-157)||(29550330-29550467)
chr3 (28-176)||(24123899-24124048)
chr3 (28-157)||(49162625-49162754)
chr3 (28-157)||(18957234-18957364)
chr3 (28-176)||(12418785-12418935)
chr3 (23-185)||(14292161-14292330)
chr3 (28-148)||(20377867-20377987)
chr3 (23-185)||(14542229-14542398)
chr3 (227-293)||(19908859-19908925)
chr3 (81-185)||(2270877-2270980)
chr3 (220-293)||(41508999-41509071)
chr3 (218-254)||(2167222-2167258)
chr3 (76-176)||(11957268-11957371)
chr3 (81-176)||(54900728-54900822)
chr3 (115-185)||(40532-40602)
chr3 (115-185)||(2249686-2249756)
chr3 (219-254)||(16245250-16245285)
chr3 (123-185)||(18757694-18757755)
chr3 (115-185)||(20187086-20187159)
chr3 (213-254)||(21302453-21302494)
chr3 (115-186)||(5840706-5840777)
chr3 (115-185)||(45221430-45221500)
chr3 (219-253)||(8170367-8170401)
chr3 (9-46)||(16802992-16803029)
chr3 (125-185)||(18719760-18719820)
chr3 (213-254)||(19171385-19171426)
chr3 (134-185)||(15518499-15518551)
[»] scaffold0104 (2 HSPs)
scaffold0104 (28-179)||(22698-22850)
scaffold0104 (28-179)||(19878-20030)
[»] scaffold0060 (1 HSPs)
scaffold0060 (28-157)||(40704-40833)
[»] scaffold0037 (1 HSPs)
scaffold0037 (19-157)||(102271-102410)
[»] scaffold0074 (1 HSPs)
scaffold0074 (81-176)||(16410-16506)
[»] scaffold0190 (2 HSPs)
scaffold0190 (28-157)||(21109-21239)
scaffold0190 (28-157)||(27948-28078)
[»] scaffold0026 (1 HSPs)
scaffold0026 (81-185)||(125084-125190)
[»] scaffold0031 (1 HSPs)
scaffold0031 (31-185)||(74754-74909)
[»] scaffold0188 (1 HSPs)
scaffold0188 (76-185)||(32237-32346)
[»] scaffold0023 (1 HSPs)
scaffold0023 (83-176)||(21064-21160)
[»] scaffold0348 (2 HSPs)
scaffold0348 (76-148)||(11172-11245)
scaffold0348 (76-148)||(16069-16142)
[»] scaffold0114 (2 HSPs)
scaffold0114 (76-148)||(25745-25818)
scaffold0114 (76-148)||(41428-41501)
[»] scaffold0011 (3 HSPs)
scaffold0011 (81-185)||(251339-251442)
scaffold0011 (115-185)||(257958-258028)
scaffold0011 (118-185)||(198102-198168)
[»] scaffold0139 (1 HSPs)
scaffold0139 (115-185)||(16709-16778)
[»] scaffold0111 (1 HSPs)
scaffold0111 (213-265)||(4114-4166)
[»] scaffold1340 (1 HSPs)
scaffold1340 (115-185)||(1853-1923)
[»] scaffold0634 (1 HSPs)
scaffold0634 (7-58)||(2151-2202)
[»] scaffold0512 (1 HSPs)
scaffold0512 (115-185)||(12030-12100)
[»] scaffold0323 (1 HSPs)
scaffold0323 (23-173)||(6728-6882)
[»] scaffold0098 (1 HSPs)
scaffold0098 (115-185)||(33593-33663)
[»] scaffold0072 (1 HSPs)
scaffold0072 (115-185)||(55375-55445)
[»] scaffold0058 (1 HSPs)
scaffold0058 (115-185)||(33877-33947)
[»] scaffold0751 (1 HSPs)
scaffold0751 (116-185)||(6501-6568)
[»] scaffold0326 (2 HSPs)
scaffold0326 (115-185)||(1076-1149)
scaffold0326 (115-189)||(16896-16973)
[»] scaffold0003 (2 HSPs)
scaffold0003 (115-176)||(136845-136906)
scaffold0003 (117-176)||(194570-194632)
[»] scaffold0574 (1 HSPs)
scaffold0574 (115-175)||(6550-6610)
[»] scaffold0113 (3 HSPs)
scaffold0113 (77-154)||(14577-14654)
scaffold0113 (77-154)||(18587-18664)
scaffold0113 (115-185)||(27431-27501)
[»] scaffold0040 (1 HSPs)
scaffold0040 (227-292)||(26362-26427)
[»] scaffold0461 (2 HSPs)
scaffold0461 (134-185)||(1760-1812)
scaffold0461 (134-185)||(8696-8748)
[»] scaffold0220 (1 HSPs)
scaffold0220 (81-185)||(9814-9921)
[»] scaffold1542 (1 HSPs)
scaffold1542 (134-185)||(1483-1534)
[»] scaffold0679 (1 HSPs)
scaffold0679 (115-185)||(3761-3831)
[»] scaffold0671 (1 HSPs)
scaffold0671 (219-254)||(950-985)
[»] scaffold0638 (1 HSPs)
scaffold0638 (227-290)||(308-371)
[»] scaffold0516 (1 HSPs)
scaffold0516 (115-185)||(8265-8335)
[»] scaffold0301 (1 HSPs)
scaffold0301 (123-185)||(14068-14131)
[»] scaffold0141 (1 HSPs)
scaffold0141 (119-185)||(32099-32165)
[»] scaffold0120 (1 HSPs)
scaffold0120 (115-176)||(5813-5875)
[»] scaffold0049 (1 HSPs)
scaffold0049 (119-185)||(82647-82713)
[»] scaffold0342 (1 HSPs)
scaffold0342 (115-185)||(17526-17599)
[»] scaffold0024 (1 HSPs)
scaffold0024 (220-254)||(40126-40160)
[»] scaffold0091 (2 HSPs)
scaffold0091 (115-179)||(23368-23430)
scaffold0091 (115-179)||(27565-27627)
[»] scaffold1615 (1 HSPs)
scaffold1615 (134-185)||(1083-1135)
[»] scaffold0610 (1 HSPs)
scaffold0610 (134-185)||(4970-5022)
[»] scaffold0511 (1 HSPs)
scaffold0511 (116-176)||(669-728)
[»] scaffold0298 (1 HSPs)
scaffold0298 (134-185)||(1329-1381)
[»] scaffold0134 (1 HSPs)
scaffold0134 (218-254)||(11680-11716)
[»] scaffold0062 (1 HSPs)
scaffold0062 (226-254)||(42750-42778)
[»] scaffold0053 (1 HSPs)
scaffold0053 (116-179)||(73570-73631)
[»] scaffold0034 (1 HSPs)
scaffold0034 (219-251)||(76925-76957)
[»] scaffold0015 (1 HSPs)
scaffold0015 (115-185)||(172460-172526)


Alignment Details
Target: scaffold0088 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 25904 - 26088
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgag 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  25904 attattctggttgaggctttttatgccaagatattatttggaggtttaaatagttgttgacgtttcgatgataatattccgctgcatattaaatgatgat 26003  T
Q  109 ttcactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggatttatta 193  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  26004 ttcattggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgaagtgtgacatgcccatttggatttatta 26088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 19285778 - 19285594
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgag 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| |  |||||||||||||||||||||||||||||     
T  19285778 attattctggttgaggctttttatgccaagatattatttggaggtttaaacagttgttgacgtttcgaatataatattccgctgcatattaaatgatgat 19285679  T
Q  109 ttcactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggatttatta 193  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  19285678 ttcattggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgcagtgtgacatgcccatttggatttatta 19285594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 19787418 - 19787603
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatga 107  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||||||  ||||||||||| |||||||||||||||||||    
T  19787418 attattctggttgaggctttttatgccgagatattattttggaggtttaaacagttgttgacgtttcgttgataatattctgctgcatattaaatgatga 19787517  T
Q  108 gttcactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggatttatta 193  Q
     |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||    
T  19787518 tttcattggatgtttaataaatagatttttatattctattttagaaatttgaaaatgtagtgtgacatgcccatttggatttatta 19787603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 12166869 - 12166683
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatga 107  Q
    ||||||||||||||||||||| ||||  ||||||||||| |||| |||||| |||||||||||||||  |||||||||||||||||||||||||||||||    
T  12166869 attattctggttgaggctttttatgctgagatattattttggaggtttaaacagttgttgacgtttcgttgataatattccgctgcatattaaatgatga 12166770  T
Q  108 gttcactggatgtttaataaatagat-ttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggatttatta 193  Q
     |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  12166769 tttcattggatgtttaataaatagattttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatttggatttatta 12166683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 25471240 - 25471403
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgag 108  Q
    |||||||| |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  25471240 attattctagttgaggctttttatgccaagatattatttggagatttaaacagttgttgacgtttcaatgataatattccgctgcatattaaatgatgat 25471339  T
Q  109 ttcactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgac 173  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  25471340 ttcattggatgtttaataaataga-ttttatattctatttcagaaatttgaaaatgaagtgtgac 25471403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 19876961 - 19876780
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatga 107  Q
    |||||||| |||||||||||| ||| | ||||||||||| |||| |||||| |||||||||||||||  |||||||||||||||||||||||||||||||    
T  19876961 attattctcgttgaggctttttatgtcgagatattattttggaggtttaaacagttgttgacgtttcgttgataatattccgctgcatattaaatgatga 19876862  T
Q  108 gttcactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggattt 189  Q
     |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  19876861 tttcattggatgtttaataaatagatttttatattctatttcagaaatttgaaagtgtagtgtgacatgcccatttggattt 19876780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 19882737 - 19882556
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatga 107  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||||||  |||||||||||||||||||||||||||||||    
T  19882737 attattctggttgaggctttttatgccgagatattattttggaggtttaaacagttgttgacgtttcgttgataatattccgctgcatattaaatgatga 19882638  T
Q  108 gttcactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggattt 189  Q
     |||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||  ||||||||| ||||||||||||    
T  19882637 tttcattggatgtttaataaatagatttttatattttatttcagaaatttgaaagtgtggtgtgacatgcccatttggattt 19882556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 30270736 - 30270556
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgttt-caatgataatattccgctgcatattaaatgatgag 108  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||     
T  30270736 attattttggttg-ggcttttatgccaagatattgtttggagttttaaatagttgttgacgttttcaatgataatattccgctgcatattaaacgacgat 30270638  T
Q  109 tt-cactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggattt 189  Q
    || |  ||||| ||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||| |||||||    
T  30270637 tttctttggatattttataaatagatttttatattctatttcagaaatttgaaaatgaagtgtgacatgcccatgtggattt 30270556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 28 - 176
Target Start/End: Original strand, 21794035 - 21794184
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||||||||| |||| |||||||||||||    
T  21794035 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgatgatttcattggatgtttaata 21794134  T
Q  127 aatagatttttatattctatttcagaaatttgaaaatgtattgtgacatg 176  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  21794135 aatagatttttatattctattttagaaatttgaaaatgtagtgtgacatg 21794184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 34641523 - 34641709
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatga- 107  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||     
T  34641523 attattctggttgaggctttttatgccaagatattgtttggagttttaaatagttgttgacgtttctatgataatattccgctgcatattaaacgacgat 34641622  T
Q  108 gttcactggatgtttaataaatagatttt----tatattctatttcagaaatttg-aaaatgtattgtgacatgtccatttggattt 189  Q
     |||  ||||| ||| |||||||||||||    |||||||||||||||||||||| |||||| | ||||||||| |||| |||||||    
T  34641623 tttctttggatattttataaatagatttttatatatattctatttcagaaatttgaaaaatgaagtgtgacatgcccatgtggattt 34641709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 34648197 - 34648383
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatga- 107  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||     
T  34648197 attattctggttgaggctttttatgccaagatattgtttggagttttaaatagttgttgacgtttctatgataatattccgctgcatattaaacgacgat 34648296  T
Q  108 gttcactggatgtttaataaatagatttt----tatattctatttcagaaatttg-aaaatgtattgtgacatgtccatttggattt 189  Q
     |||  ||||| ||| |||||||||||||    |||||||||||||||||||||| |||||| | ||||||||| |||| |||||||    
T  34648297 tttctttggatattttataaatagatttttatatatattctatttcagaaatttgaaaaatgaagtgtgacatgcccatgtggattt 34648383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 26419303 - 26419438
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    ||||||||||||| |||||| |||| |||||| ||||||||  ||||  |||||||||||||||||   | |||||||||| |||| |||||||||||||    
T  26419303 tttatgccaagattttattttggaggtttaaaaagttgttgttgttttgatgataatattccgctgttaaataaatgatgatttcaatggatgtttaata 26419402  T
Q  127 aatagatttttatattctatttcagaaatttgaaaa 162  Q
    |||||||||||||||||||||| |||||||| ||||    
T  26419403 aatagatttttatattctattttagaaattttaaaa 26419438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 8761044 - 8761141
Alignment:
Q  81 aatattccgctgcatatta-aatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    |||||||||||||| |||  ||| |||| ||||  ||||||||| |||||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  8761044 aatattccgctgcaaattttaatcatgatttcataggatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatg 8761141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 8768781 - 8768878
Alignment:
Q  81 aatattccgctgcatatta-aatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    |||||||||||||| |||  ||| |||| ||||  ||||||||| |||||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  8768781 aatattccgctgcaaattttaatcatgatttcaaaggatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatg 8768878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 7428857 - 7428788
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||| |||| |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| |||||    
T  7428857 ggatttttattaaatagatttt-atattctattttagaaatttgaaaatgtagtgtgacatgtccgtttgg 7428788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 22757824 - 22757720
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtcc 179  Q
    ||||||||||||||  ||||||||||| ||    ||||||||| | ||||||||||| ||||||||||| |||||||||||| |||| ||||||||| ||    
T  22757824 aatattccgctgcaagttaaatgatgattttgaaggatgtttagttaaatagatttt-atattctatttaagaaatttgaaattgtagtgtgacatgccc 22757726  T
Q  180 atttgg 185  Q
     |||||    
T  22757725 gtttgg 22757720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 4340285 - 4340353
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacaccctctttat-actcttattagttctacaaacggga 294  Q
    |||||| |||||||||||||||||||||| |||| |||| | | ||||||| |||||||||||||||||    
T  4340285 cccatcaatgaatcttaggacactcataacacacgctctctctcactcttagtagttctacaaacggga 4340353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 14072696 - 14072790
Alignment:
Q  197 tgggtcttgtccaatattctagtaggtctacccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacgg 292  Q
    |||||| |||||||| ||| ||||||||  ||||||||||||||||||  ||||||||  ||||||||| |  | ||||| |||||||||||||||    
T  14072696 tgggtcctgtccaatcttccagtaggtcagcccatctatgaatcttagatcactcatagcacaccctctct-cattcttagtagttctacaaacgg 14072790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 9517268 - 9517334
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggg 293  Q
    ||||||||||||||||||||||||||||  ||||||| | ||  || ||| ||||||||||||||||    
T  9517268 cccatctatgaatcttaggacactcatagcacaccctttctacgcttttagtagttctacaaacggg 9517334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 24478821 - 24478887
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggg 293  Q
    ||||||||||||||||||||||||||||  ||| ||||| ||  |||||| ||| ||||||||||||    
T  24478821 cccatctatgaatcttaggacactcataccacagcctctctacgctcttagtagctctacaaacggg 24478887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 251
Target Start/End: Original strand, 1635504 - 1635537
Alignment:
Q  218 gtaggtctacccatctatgaatcttaggacactc 251  Q
    ||||||||||||||||||||||||||||||||||    
T  1635504 gtaggtctacccatctatgaatcttaggacactc 1635537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 5295257 - 5295321
Alignment:
Q  115 ggatgtttaat-aaatagatttttata--ttctatttcagaaatttgaaaatgtattgtgacatg 176  Q
    ||||||||||| |||||||||||||||  |||||||| |||||||||||| |||| |||||||||    
T  5295257 ggatgtttaattaaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatg 5295321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 22412637 - 22412565
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacaccctctttatac--tcttattagttctacaaa 289  Q
    ||||||| ||||||||||||||||| ||||||||||| |||| |||| || ||  ||||| ||||||||||||    
T  22412637 taggtcttcccatctatgaatcttatgacactcataacacactctctgtacactttcttagtagttctacaaa 22412565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 22906535 - 22906462
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctattt 148  Q
    |||| |||||||||||||| ||| |||||| | |||   ||||||||||| |||||||||||||||||||||||    
T  22906535 atgagaatattccgctgcagatttaatgataaattcgaaggatgtttaattaaatagatttttatattctattt 22906462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 14616874 - 14616984
Alignment:
Q  75 aatgataatattccgctgcatattaaatgatgagttcactggatgtttaa-taaatagatttttatattctatttcagaaa-tttgaaaatgtattgtga 172  Q
    ||||| |||||||||||||||| | |||||||  || |  |||||||||| |||||| ||||||||||||||||| ||||| |||||| ||||| |||||    
T  14616874 aatgaaaatattccgctgcataattaatgatgttttgaa-ggatgtttaattaaata-atttttatattctatttaagaaattttgaatatgtagtgtga 14616971  T
Q  173 catgtccatttgg 185  Q
    |||| || |||||    
T  14616972 catgcccgtttgg 14616984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 2707901 - 2707831
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| ||| |||||||| ||||||||| || |||||    
T  2707901 ggatgtttattaaatagatttt-atattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttgg 2707831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 14595317 - 14595387
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||| |||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  14595317 ggatttttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 14595387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 20005496 - 20005461
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcata 254  Q
    ||||||| ||||||||||||||||||||||||||||    
T  20005496 taggtcttcccatctatgaatcttaggacactcata 20005461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 254
Target Start/End: Complemental strand, 22813317 - 22813286
Alignment:
Q  223 tctacccatctatgaatcttaggacactcata 254  Q
    ||||||||||||||||||||||||||||||||    
T  22813317 tctacccatctatgaatcttaggacactcata 22813286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 28707470 - 28707400
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| ||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  28707470 ggatgcttattaaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgg 28707400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 1592316 - 1592251
Alignment:
Q  115 ggatgtttaat-aaatagatttttatat--tctatttcagaaatttgaaaa-tgtattgtgacatg 176  Q
    ||||||||||| ||||||||||||||||  ||||||| ||||||||||||| |||| |||||||||    
T  1592316 ggatgtttaattaaatagatttttatatgttctatttaagaaatttgaaaattgtagtgtgacatg 1592251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 9623379 - 9623434
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||||||||||  ||||||||||||||| ||||| |||||||||||| |||||||||    
T  9623379 tttaataaatag--ttttatattctatttaagaaattttgaaaatgtagtgtgacatg 9623434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 14638103 - 14638141
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacaccctct 265  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  14638103 cccatctatgaatcttaggacactcatagcacaccctct 14638141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 14722480 - 14722542
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaa 289  Q
    |||||||||||||||||||||| |||||  ||||||||| ||  ||| || ||||||||||||    
T  14722480 cccatctatgaatcttaggacattcatagcacaccctctctacgctcctagtagttctacaaa 14722542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 22905891 - 22905818
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctattt 148  Q
    |||| |||||||||||||| ||| |||||| | |||    |||||||||| |||||||||||||||||||||||    
T  22905891 atgagaatattccgctgcagatttaatgataaattcgaatgatgtttaattaaatagatttttatattctattt 22905818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 23236064 - 23236117
Alignment:
Q  133 tttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  23236064 tttttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgg 23236117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 18316685 - 18316744
Alignment:
Q  116 gatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatg 176  Q
    |||||||| ||||||| |||||||||||||||| ||||||||  ||| ||| |||||||||    
T  18316685 gatgtttattaaatag-tttttatattctatttaagaaattttgaaaagtagtgtgacatg 18316744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 6e-71; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 20046425 - 20046608
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagt 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| || || |    
T  20046425 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgcttcataataaacgacgatt 20046524  T
Q  110 tcactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggatttatta 193  Q
    ||   |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  20046525 tcgtcggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttatta 20046608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 20053463 - 20053646
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagt 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| || || |    
T  20053463 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgcttcataataaacgacgatt 20053562  T
Q  110 tcactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggatttatta 193  Q
    ||   |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  20053563 tcgtcggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttatta 20053646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 157
Target Start/End: Complemental strand, 24076931 - 24076800
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||| |||||||||||||| |||  |||||||||||| ||||||||||||||||||    
T  24076931 tttatgccaagatattattttggaggtttaaacagttgttgatgtttcgatgataatattccgttgctaattaaatgatgatttcactggatgtttaata 24076832  T
Q  127 aatagat-ttttatattctatttcagaaattt 157  Q
    ||||||| ||||||||||||||| ||||||||    
T  24076831 aatagattttttatattctattttagaaattt 24076800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 21541492 - 21541343
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||||||||| |||| |||||||||| ||    
T  21541492 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgatgatttcattggatgtttatta 21541393  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtattgtgacatg 176  Q
    |||||  ||||||||||||||| ||  ||||||||||||||| |||||||||    
T  21541392 aatag--ttttatattctatttaagaaaaatttgaaaatgtagtgtgacatg 21541343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 157
Target Start/End: Complemental strand, 47483710 - 47483581
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| | ||||||| ||||   |||||||||||||||||  |||||||| ||| |||  |||||||||||||    
T  47483710 tttatgccaagatattattttggaggtttaaacacttgttgatgtttgc-tgataatattccgctgctgattaaatgttgatttctatggatgtttaata 47483612  T
Q  127 aatagatttttatattctatttcagaaattt 157  Q
    |||||||||||||||||||||| ||||||||    
T  47483611 aatagatttttatattctatttaagaaattt 47483581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 24109669 - 24109768
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacat 175  Q
    |||| |||||||||||||  | |||||||||| |||  |||||| ||||||||||| ||||||||||||||||  ||| |||||||||||| ||||||||    
T  24109669 atgagaatattccgctgctaaataaatgatgatttcgatggatgcttaataaatag-tttttatattctatttaggaattttgaaaatgtagtgtgacat 24109767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 19858724 - 19858621
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtcc 179  Q
    |||||||||||||| ||||| |||||| ||    ||||||||| ||||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||    
T  19858724 aatattccgctgcaaattaa-tgatgattttgaaggatgtttattaaatag-tttttatattctatttcagaaattttgaaaatgtagtgtgacatgccc 19858627  T
Q  180 atttgg 185  Q
     |||||    
T  19858626 gtttgg 19858621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 293
Target Start/End: Original strand, 26021284 - 26021348
Alignment:
Q  228 ccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggg 293  Q
    |||||||||||||||||||||||||||| |||| |||| ||| |||||| ||||||||||||||||    
T  26021284 ccatctatgaatcttaggacactcataacacactctctctat-ctcttagtagttctacaaacggg 26021348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 148
Target Start/End: Original strand, 22448811 - 22448937
Alignment:
Q  23 aggcttttatgccaagatattatt-tggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtt 121  Q
    |||||| ||||||||||| |  || ||||| |||||| ||||||||  |||| | ||| |||||||||||||| ||| |||||||| || |  |||||||    
T  22448811 aggcttctatgccaagatttagttatggaggtttaaacagttgttgttgtttga-tgaaaatattccgctgcagatttaatgatgattttaaaggatgtt 22448909  T
Q  122 taat-aaatagatttttatattctattt 148  Q
    |||| |||||||||||||||||||||||    
T  22448910 taattaaatagatttttatattctattt 22448937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 18528817 - 18528743
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggg 293  Q
    |||||||| |||| ||||||||||||||||||||||  ||||||||| ||   ||||| ||||||||||||||||    
T  18528817 taggtctaaccatatatgaatcttaggacactcatagcacaccctctctacgttcttagtagttctacaaacggg 18528743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 3707396 - 3707469
Alignment:
Q  114 tggatgtttaat-aaatagatttt-tatattctatttcagaaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||||||||||| ||||||||||| |||||||||||| |||||||||||| |||| ||||||||| || |||||    
T  3707396 tggatgtttaattaaatagattttatatattctatttaagaaatttgaaattgtagtgtgacatgcccgtttgg 3707469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 23196197 - 23196301
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtcc 179  Q
    |||||||||||||| | | |||||||| ||    ||||||||| ||||||| |||||||||||||||| ||||| |||||||||||| ||||||||| ||    
T  23196197 aatattccgctgcaaaattaatgatgattttgaaggatgtttattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 23196295  T
Q  180 atttgg 185  Q
     |||||    
T  23196296 gtttgg 23196301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 19852589 - 19852495
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    |||||||||||||| ||||| |||||| ||    ||||||||| ||||||| |||||||||||||||| ||||| |||||||||||| |||||||||    
T  19852589 aatattccgctgcaaattaa-tgatgattttgaaggatgtttattaaatag-tttttatattctattttagaaattttgaaaatgtagtgtgacatg 19852495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 29555088 - 29555159
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgga 186  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || ||||||    
T  29555088 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgga 29555159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 11944605 - 11944535
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| ||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| ||||||||    
T  11944605 ggatgcttattaaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgcccatttgg 11944535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 293
Target Start/End: Original strand, 14780090 - 14780164
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggg 293  Q
    |||||| ||||||||||||||||||| |||||||||  ||||||||| ||  ||| || |||||||| |||||||    
T  14780090 taggtcgacccatctatgaatcttagaacactcatagcacaccctctctactctcctagtagttctataaacggg 14780164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 293
Target Start/End: Original strand, 21449620 - 21449694
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggg 293  Q
    |||||| || ||||||||||||||||||||||||||  ||||||||| ||  ||| || ||||| ||||||||||    
T  21449620 taggtcgacacatctatgaatcttaggacactcatagcacaccctctctacgctcctagtagttttacaaacggg 21449694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 955656 - 955724
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctattt 148  Q
    |||||||||||||| ||| |||||| | |||   ||||||||||| |||||||||||||||||||||||    
T  955656 aatattccgctgcagatttaatgataatttcgaaggatgtttaattaaatagatttttatattctattt 955724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 20838812 - 20838883
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaattt-gaaaatgtattgtgacatgtccatttgga 186  Q
    ||||||||| |||||||| ||| ||||||||||| |||||||| ||||||||| ||||||||| || ||||||    
T  20838812 ggatgtttattaaatagaattt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgga 20838883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 14781446 - 14781411
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcata 254  Q
    ||||||| ||||||||||||||||||||||||||||    
T  14781446 taggtcttcccatctatgaatcttaggacactcata 14781411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 20824993 - 20825063
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||| ||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  20824993 ggatgtttattaaatagaattt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 20825063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 250
Target Start/End: Original strand, 29242979 - 29243010
Alignment:
Q  219 taggtctacccatctatgaatcttaggacact 250  Q
    ||||||||||||||||||||||||||||||||    
T  29242979 taggtctacccatctatgaatcttaggacact 29243010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 2341666 - 2341735
Alignment:
Q  116 gatgtttaataaatagatttttatattctatttcagaaattt-gaaaatgtattgtgacatgtccatttgg 185  Q
    |||||||| |||||||||||| ||||||||||| |||| ||| ||||||||| ||||||||| || |||||    
T  2341666 gatgtttattaaatagatttt-atattctatttaagaatttttgaaaatgtagtgtgacatgcccgtttgg 2341735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 16179554 - 16179620
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggg 293  Q
    |||||||||||||||||||||||  |||  ||||||||| ||  ||| || ||||||||||||||||    
T  16179554 cccatctatgaatcttaggacacgtatagcacaccctctctacgctcctagtagttctacaaacggg 16179620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 20032645 - 20032706
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||||||| |||||||||||| ||||||||||| ||||| ||||||||| || |||||||||    
T  20032645 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatatagtgtgacatg 20032706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 21666439 - 21666366
Alignment:
Q  222 gtctacccatctatgaatcttaggacactcataatacaccctctttatac--tcttattagttctacaaacggg 293  Q
    |||| ||||||||||||||||||||||||||||  |||| |||| ||  |  ||||| ||||||||||||||||    
T  21666439 gtctgcccatctatgaatcttaggacactcatagcacactctctctacgctttcttagtagttctacaaacggg 21666366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 25403670 - 25403636
Alignment:
Q  220 aggtctacccatctatgaatcttaggacactcata 254  Q
    ||||||||||||||||||||||||||||| |||||    
T  25403670 aggtctacccatctatgaatcttaggacattcata 25403636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 43631460 - 43631521
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||| ||| |||||||||||| ||||||||||| ||||| |||||||||||| |||||||||    
T  43631460 ggatgcttattaaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatg 43631521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 9402108 - 9402173
Alignment:
Q  189 tattagtgtgggtcttgtccaatattctagtaggtctacccatctatgaatcttaggacactcata 254  Q
    |||||||||||| | || ||||| |||  ||| ||||||||||||||||||||| | |||||||||    
T  9402108 tattagtgtggggcctggccaatgttcatgtacgtctacccatctatgaatctttgcacactcata 9402173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 20942519 - 20942585
Alignment:
Q  118 tgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||||| |||||||  ||||||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  20942519 tgtttattaaatag--ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 20942585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 22623413 - 22623445
Alignment:
Q  222 gtctacccatctatgaatcttaggacactcata 254  Q
    |||| ||||||||||||||||||||||||||||    
T  22623413 gtctgcccatctatgaatcttaggacactcata 22623445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 254
Target Start/End: Original strand, 22664701 - 22664737
Alignment:
Q  218 gtaggtctacccatctatgaatcttaggacactcata 254  Q
    |||||||||||||  ||||||||||||||||||||||    
T  22664701 gtaggtctacccacgtatgaatcttaggacactcata 22664737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 23711985 - 23711928
Alignment:
Q  116 gatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacat 175  Q
    |||||||| |||||||  ||||||||||||||| |||||||| |||| ||| ||||||||    
T  23711985 gatgtttattaaatag--ttttatattctatttaagaaattttaaaaagtagtgtgacat 23711928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 292
Target Start/End: Complemental strand, 31235547 - 31235444
Alignment:
Q  188 ttattagtgtgggtcttgtccaatattctagtaggtctacccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctaca 287  Q
    |||||||| | ||| ||| ||||| ||||  ||||||  |||||||| ||||||||||||||||| | ||||| |||| | | | |||| ||||||||||    
T  31235547 ttattagtctaggttttggccaatgttcttataggtcagcccatctacgaatcttaggacactcacagtacactctctct-tgcacttagtagttctaca 31235449  T
Q  288 aacgg 292  Q
    |||||    
T  31235448 aacgg 31235444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 3e-69; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 17053230 - 17053047
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgag 108  Q
    |||||||||||||||||||||||||| ||||||||||| |||| || ||| |||||||||||||||  |||||||||||||||||||||||||||||||     
T  17053230 attattctggttgaggcttttatgccgagatattattttggaggtt-aaacagttgttgacgtttcgttgataatattccgctgcatattaaatgatgat 17053132  T
Q  109 ttcactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggatttatta 193  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  17053131 ttcattggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatttggatttatta 17053047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 23824608 - 23824459
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||| ||||||||||||  ||||||||||||  ||| |||||||||| ||    
T  23824608 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgattatattccgctgctaattaaatgatgatctcattggatgtttatta 23824509  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtattgtgacatg 176  Q
    |||||  ||||||||||||||| ||  ||||||||||||||| |||||||||    
T  23824508 aatag--ttttatattctatttaagaaaaatttgaaaatgtagtgtgacatg 23824459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 29327635 - 29327496
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| || ||| ||||||||| |||   |||||||| |||||||||  |||||||| ||| ||| ||||||||||| ||    
T  29327635 tttatgccaagatattattttggaggttaaaacagttgttgaagttgtgatgataattttccgctgctaattaaatgttgatttctctggatgtttagta 29327536  T
Q  127 aatagatttttatattctatttcagaaatttgaaaatgta 166  Q
    |||||||||||||||||||||| ||||||||  |||||||    
T  29327535 aatagatttttatattctatttaagaaattttgaaatgta 29327496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 27889475 - 27889337
Alignment:
Q  19 gttgaggcttttatgccaagatattatttggagttttaaa-tagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactgga 117  Q
    ||||||||||| ||||||||||||| |||||||||||||| |||||||||| |||| |   ||||||||| | |||   ||||||||||| |||| ||||    
T  27889475 gttgaggcttt-atgccaagatattgtttggagttttaaaatagttgttgatgtttgatgaataatattctggtgctgtttaaatgatgatttcattgga 27889377  T
Q  118 tgtttaataaatagatttttatattctatttcagaaattt 157  Q
    ||||||||||||  || |||||||||||||| ||||||||    
T  27889376 tgtttaataaatgaatatttatattctatttaagaaattt 27889337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 27948133 - 27947995
Alignment:
Q  19 gttgaggcttttatgccaagatattatttggagttttaaa-tagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactgga 117  Q
    ||||||||||| ||||||||||||| |||||||||||||| |||||||||| |||| |   ||||||||| | |||   ||||||||||| |||| ||||    
T  27948133 gttgaggcttt-atgccaagatattgtttggagttttaaaatagttgttgatgtttgatgaataatattctggtgctgtttaaatgatgatttcattgga 27948035  T
Q  118 tgtttaataaatagatttttatattctatttcagaaattt 157  Q
    ||||||||||||  || |||||||||||||| ||||||||    
T  27948034 tgtttaataaatgaatatttatattctatttaagaaattt 27947995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 22176450 - 22176613
Alignment:
Q  23 aggcttttatgccaagatattatt-tggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtt 121  Q
    ||||||||||||||| || ||| | ||||| |||||| ||||||||  ||||  |||| |||||||||||||  | |||||||||| |    ||||||||    
T  22176450 aggcttttatgccaatattttactatggaggtttaaacagttgttgttgttttgatgagaatattccgctgctaaataaatgatgattctgatggatgtt 22176549  T
Q  122 taataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
     | |||||||| ||||||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  22176550 cattaaataga-ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 22176613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 31419356 - 31419455
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgaca 174  Q
    |||| |||||||||||||  | |||||||||| |||  ||||||| |||||||||| |||||||||||||||| ||||| |||||||||||| |||||||    
T  31419356 atgagaatattccgctgctaaataaatgatgatttcgatggatgtgtaataaatag-tttttatattctattt-agaaattttgaaaatgtagtgtgaca 31419453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 22064196 - 22064307
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa--tttgaaaatgtattgtgac 173  Q
    |||| |||||||||||||| ||| |||||| | ||    ||||||| | |||||||||||||||||||||||| |||||  |||||||||||| ||||||    
T  22064196 atgagaatattccgctgcagatttaatgataattttgaaggatgttaattaaatagatttttatattctatttaagaaaattttgaaaatgtagtgtgac 22064295  T
Q  174 atgtccatttgg 185  Q
    ||| || |||||    
T  22064296 atgcccgtttgg 22064307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 21281551 - 21281446
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtcc 179  Q
    |||| |||||||||  ||||||||||| ||    ||||||||||| ||||||||||||||||||||||| |||||||| ||| || | ||||||||| ||    
T  21281551 aataatccgctgcaagttaaatgatgattttgaaggatgtttaattaaatagatttttatattctatttaagaaatttaaaattgaagtgtgacatgccc 21281452  T
Q  180 atttgg 185  Q
     |||||    
T  21281451 gtttgg 21281446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 36601156 - 36601085
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaat-ttgaaaatgtattgtgacatgtccatttgga 186  Q
    ||||||||| |||||||||||| ||||||||||| |||||| ||||||||||| ||||||||| || ||||||    
T  36601156 ggatgtttattaaatagatttt-atattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtttgga 36601085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 7302263 - 7302333
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  7302263 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 7302333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 11773764 - 11773694
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaat-ttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| |||||| ||||||||||| |||| ||||||| |||||    
T  11773764 ggatgtttattaaatagatttt-atattctatttaagaaatcttgaaaatgtagtgtgtcatgtccgtttgg 11773694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 21322901 - 21322971
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  21322901 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 21322971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 21327489 - 21327559
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  21327489 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 21327559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 44494693 - 44494763
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  44494693 ggatgtttattaaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgg 44494763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 5239535 - 5239474
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||||||| ||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||    
T  5239535 ggatgtttattaaatag-tttttatattctatttaagaaattttgataatgtattgtgacatg 5239474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 25226615 - 25226677
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaa 289  Q
    |||||||||||||||||||||||||||   ||||||||||||  |||||| ||||| ||||||    
T  25226615 cccatctatgaatcttaggacactcattgcacaccctctttacgctcttagtagttttacaaa 25226677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 44430907 - 44430846
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| |||||||||    
T  44430907 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatg 44430846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 22026136 - 22026290
Alignment:
Q  23 aggcttttatgccaagatattatt-tggagttttaaatagttgttgacgtt---tcaatgataatattccgctgcatattaaatgatgagttcactggat 118  Q
    |||||||||||||||||  ||||| ||||| |||||||||||||||  |||   |  |||| ||||||| |||||| ||| |||||| | ||    ||||    
T  22026136 aggcttttatgccaagaatttattatggaggtttaaatagttgttgttgttgttttgatgagaatattctgctgcagatttaatgataattttgaaggat 22026235  T
Q  119 gtttaataaatagatttttatattctatttcagaaa--tttgaaaatgtattgtg 171  Q
    ||| | |||||||||||| ||||||||||| |||||  |||||||||||| ||||    
T  22026236 gttaattaaatagattttcatattctatttaagaaaattttgaaaatgtagtgtg 22026290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 24110297 - 24110224
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacgg 292  Q
    |||||| || ||||||||||||||||||||||||||  ||||||||| ||  || ||||||||  |||||||||    
T  24110297 taggtcaacacatctatgaatcttaggacactcatagcacaccctctctacgcttttattagtaatacaaacgg 24110224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 31412917 - 31413016
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgaca 174  Q
    |||| |||||||||||||  | |||||||||  |||  ||||||| |||||||||| |||||||||| ||||| ||||| |||||||||||| |||||||    
T  31412917 atgagaatattccgctgctaaataaatgatgttttcgatggatgtgtaataaatag-tttttatattatattt-agaaattttgaaaatgtagtgtgaca 31413014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 293
Target Start/End: Original strand, 17997038 - 17997105
Alignment:
Q  228 ccatctatgaatcttaggacactcataatacaccctctttatact--cttattagttctacaaacggg 293  Q
    ||||||||||||||||||||||||||| ||||| |||| ||  ||  |||| ||||||||||||||||    
T  17997038 ccatctatgaatcttaggacactcatagtacactctctctacgcttacttagtagttctacaaacggg 17997105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 29381907 - 29381847
Alignment:
Q  230 atctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaac 290  Q
    |||||||||||||||||||||||||| ||||| ||| |   |||||| |||||||||||||    
T  29381907 atctatgaatcttaggacactcataacacaccatctctccgctcttagtagttctacaaac 29381847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 6609362 - 6609432
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||  |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  6609362 ggatgtttgttaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 6609432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 22248547 - 22248477
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaat-ttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||| |||| |||||||||||| ||||||||||| |||||| ||||||||||| ||||||||| || |||||    
T  22248547 ggatatttattaaatagatttt-atattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtttgg 22248477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 45136051 - 45136117
Alignment:
Q  119 gtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  45136051 gtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 45136117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 11252452 - 11252576
Alignment:
Q  21 tgaggcttttatgccaaga-tattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatg 119  Q
    ||||||||||||||||||| |||||  |||||  ||||| ||||||||  ||||  |||| |||||||||||||  | |||||||||  ||   ||||||    
T  11252452 tgaggcttttatgccaagattatta--tggag-gttaaacagttgttgttgttttgatgagaatattccgctgctaaataaatgatgcttttgatggatg 11252548  T
Q  120 tttaataaatagatttttatattctattt 148  Q
    |||| |||||||| |||||||||||||||    
T  11252549 tttattaaataga-ttttatattctattt 11252576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 26394257 - 26394216
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacac 260  Q
    |||||||||| | |||||||||||||||||||||||| ||||    
T  26394257 taggtctacctagctatgaatcttaggacactcataacacac 26394216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 26831949 - 26831873
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacaccctctttatact--cttattagttctacaaacggg 293  Q
    ||||||| || |||||||||||||||||||||||||| | || |||| ||  ||  |||| ||||||||||||||||    
T  26831949 taggtctgcctatctatgaatcttaggacactcataacatactctctctaagcttacttagtagttctacaaacggg 26831873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 28852949 - 28852889
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  28852949 taaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 28852889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 157
Target Start/End: Complemental strand, 22989084 - 22989052
Alignment:
Q  125 taaatagatttttatattctatttcagaaattt 157  Q
    |||||||||||||||||||||||| ||||||||    
T  22989084 taaatagatttttatattctatttaagaaattt 22989052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 255
Target Start/End: Original strand, 34497667 - 34497695
Alignment:
Q  227 cccatctatgaatcttaggacactcataa 255  Q
    |||||||||||||||||||||||||||||    
T  34497667 cccatctatgaatcttaggacactcataa 34497695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 34949695 - 34949623
Alignment:
Q  115 ggatgtttaataaatagatttttat-attctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| ||||||||||||| | |||||||||  |||| |||||||||||| ||||||||| || |||||    
T  34949695 ggatgtttattaaatagattttttttattctatttatgaaaatttgaaaatgtagtgtgacatgcccgtttgg 34949623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 16928187 - 16928373
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatga 107  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||||||  |||||||||||||||||||||||||||||||    
T  16928187 attattctggttgaggctttttatgccgagatattattttggaggtttaaacagttgttgacgtttcgttgataatattccgctgcatattaaatgatga 16928286  T
Q  108 gttcactggatgtttaataaataga-tttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggatttatta 193  Q
     |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  16928287 tttcaatggatgtttaataaatagattttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatttggatttatta 16928373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 12592179 - 12592359
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatga-g 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| || ||      
T  12592179 attattctggttgaggcttttatgccaagatattgtttggagttttaaatagttgttgacgttccaatgataatactccgctgcatattaaacgacgatt 12592278  T
Q  109 ttcactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggattt 189  Q
    |||  ||||| ||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||| |||||||    
T  12592279 ttctttggatattttataaatagatttttatattctatttcagaaatttgaaaatgaagtgtgacatgcccatgtggattt 12592359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 10 - 182
Target Start/End: Complemental strand, 13005938 - 13005755
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgag 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||     
T  13005938 attattctggttgaggctttttatgccaagatattatttggagatttaaacagttgttgacgtttcgatgataatattccgctgcatattaaatgatgat 13005839  T
Q  109 ttcactggatgtttaataaatagatttt----------tatattctatttcagaaatttgaaaatgtattgtgacatgtccatt 182  Q
    |||| || ||||||||||||||||||||          |||||||||||||||||||||||||||||| ||||||||| |||||    
T  13005838 ttcattgaatgtttaataaatagatttttccttttttatatattctatttcagaaatttgaaaatgtagtgtgacatgcccatt 13005755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 26295364 - 26295494
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||| ||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||||||||| || | |||||||||||||    
T  26295364 tttatgccaatatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgatgattttattggatgtttaata 26295463  T
Q  127 aatagatttttatattctatttcagaaattt 157  Q
    |||||||||||||||||||||| ||||||||    
T  26295464 aatagatttttatattctattttagaaattt 26295494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 46173751 - 46173624
Alignment:
Q  31 atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaataaat 129  Q
    ||||||||||||||||| |||| || ||| ||||||||| |||   |||||||| |||||||||  |||||||| ||| ||| ||||||||||| |||||    
T  46173751 atgccaagatattattttggaggttaaaacagttgttgaagttgtgatgataattttccgctgctaattaaatgttgatttctctggatgtttactaaat 46173652  T
Q  130 agatttttatattctatttcagaaattt 157  Q
    ||||||||||||||||||| ||||||||    
T  46173651 agatttttatattctatttaagaaattt 46173624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 37244995 - 37245094
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgaca 174  Q
    |||| |||||||||||||  |||||||||||| |||  |||||||||||||||||| |||||||||||||||| ||||| |||||||||||| |||||||    
T  37244995 atgagaatattccgctgctaattaaatgatgatttcgatggatgtttaataaatag-tttttatattctattt-agaaattttgaaaatgtagtgtgaca 37245092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 18959118 - 18959226
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacat 175  Q
    |||| |||||||||||||  | |||||||||| |||  ||  |||||||||||||| |||||||||||||||| |||| |||||||||||| ||||||||    
T  18959118 atgagaatattccgctgctaaataaatgatgatttcgatgattgtttaataaatag-tttttatattctatttaagaattttgaaaatgtagtgtgacat 18959216  T
Q  176 gtccatttgg 185  Q
    | || |||||    
T  18959217 gcccgtttgg 18959226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 293
Target Start/End: Complemental strand, 8978554 - 8978487
Alignment:
Q  226 acccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggg 293  Q
    |||||| ||||||||||| ||||||||||  ||||||||| ||| |||||| ||||||||||||||||    
T  8978554 acccatttatgaatcttatgacactcatagcacaccctctctatgctcttagtagttctacaaacggg 8978487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 16946269 - 16946419
Alignment:
Q  27 ttttatgccaagatattatt-tggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaat 125  Q
    |||||||||||||| ||||| ||||| || ||| |||| |||  ||||   ||| |||||||| ||||  | |||||||||| |||  |||||||||| |    
T  16946269 ttttatgccaagattttattatggagattaaaacagttattgttgttttgttgagaatattccactgctaaataaatgatgatttcgatggatgtttact 16946368  T
Q  126 aaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||||| ||||||||||||||| ||||| |||||||||||| ||| |||||    
T  16946369 aaataga-ttttatattctatttaagaaattttgaaaatgtagtgtaacatg 16946419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 16952869 - 16953019
Alignment:
Q  27 ttttatgccaagatattatt-tggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaat 125  Q
    |||||||||||||| ||||| ||||| || ||| |||| |||  ||||  |||| ||||||| |||||    |||||||||| |||  ||||| |||| |    
T  16952869 ttttatgccaagattttattatggagattaaaacagttattgttgttttgatgagaatattctgctgctacataaatgatgatttcgatggatatttatt 16952968  T
Q  126 aaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||||||||| ||||||||||| ||||| |||||||||||| |||||||||    
T  16952969 aaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatg 16953019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 176
Target Start/End: Original strand, 3902 - 4061
Alignment:
Q  21 tgaggcttttatgccaagatattatt-tggagttttaaatagttgttgacgtt---tcaatgataatattccgctgcatattaaatgatgagttcactgg 116  Q
    |||||||||||||||| |||| | || |||||  ||||||||||||||  |||   |  |||| |||||||||||||  | |||||||||| |||  |||    
T  3902 tgaggcttttatgccaggataattttatggagaattaaatagttgttgttgttgttttgatgagaatattccgctgctaaataaatgatgatttcgatgg 4001  T
Q  117 atgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||| ||||||||| |||||||||||||||| | ||| ||| |||||||| |||||||||    
T  4002 atgttcaataaatag-tttttatattctattttataaatttttaaaatgtagtgtgacatg 4061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 36306722 - 36306827
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtcc 179  Q
    ||||||||||| ||  ||||||||||| ||    ||||||||||| ||||||||||||||||||||||| |||||||| ||  |||| ||||||||| ||    
T  36306722 aatattccgctacaagttaaatgatgattttgaaggatgtttaattaaatagatttttatattctatttaagaaatttaaagttgtagtgtgacatgccc 36306821  T
Q  180 atttgg 185  Q
     |||||    
T  36306822 gtttgg 36306827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 13759509 - 13759453
Alignment:
Q  233 tatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaa 289  Q
    |||||||||||||||||||||| |||||| ||||||  ||| |||||||||||||||    
T  13759509 tatgaatcttaggacactcatagtacaccttctttacgctcatattagttctacaaa 13759453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 125250 - 125320
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  125250 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 125320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 16185127 - 16185057
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  16185127 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 16185057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 46349405 - 46349474
Alignment:
Q  116 gatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||||||| ||||||| |||||||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  46349405 gatgtttattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 46349474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 4819379 - 4819420
Alignment:
Q  213 ttctagtaggtctacccatctatgaatcttaggacactcata 254  Q
    |||| ||||||||||||||||||||||||||||||| |||||    
T  4819379 ttcttgtaggtctacccatctatgaatcttaggacaatcata 4819420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 6411386 - 6411290
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||||||||||||  ||||||||||| ||    ||||||||||| ||||||||||| ||||||||||| ||||| ||||||| |||| |||||||||    
T  6411386 aatattccgctgcaagttaaatgatgattttgaaggatgtttaattaaatagatttt-atattctatttaagaaattttgaaattgtagtgtgacatg 6411290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 15338368 - 15338304
Alignment:
Q  115 ggatgtttaat-aaatagatttttatat--tctatttcagaaatttgaaaatgtattgtgacatg 176  Q
    ||||||||||| ||||||||||||||||  ||||||| |||||||||||| |||| |||||||||    
T  15338368 ggatgtttaattaaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatg 15338304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 15711625 - 15711689
Alignment:
Q  115 ggatgtttaat-aaatagatttttatat--tctatttcagaaatttgaaaatgtattgtgacatg 176  Q
    ||||||||||| ||||||||||||||||  ||||||| |||||||||||| |||| |||||||||    
T  15711625 ggatgtttaattaaatagatttttatatgttctatttaagaaatttgaaattgtagtgtgacatg 15711689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 254
Target Start/End: Complemental strand, 16058531 - 16058466
Alignment:
Q  189 tattagtgtgggtcttgtccaatattctagtaggtctacccatctatgaatcttaggacactcata 254  Q
    |||||||||||||| |||||||  |||   ||||| |||| |||||||||||||||||||||||||    
T  16058531 tattagtgtgggtcctgtccaaggttcccttaggtgtaccaatctatgaatcttaggacactcata 16058466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 2348483 - 2348412
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggg 293  Q
    ||||| ||| ||||||||||||||||||||||||||   ||||||||    ||||||| ||||||||||||||||    
T  2348483 taggtttactcatctatgaatcttaggacactcatagcgcaccctct---cactcttagtagttctacaaacggg 2348412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 254
Target Start/End: Original strand, 9131441 - 9131477
Alignment:
Q  218 gtaggtctacccatctatgaatcttaggacactcata 254  Q
    |||||||||||||||||| ||||||||||||||||||    
T  9131441 gtaggtctacccatctataaatcttaggacactcata 9131477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 10305544 - 10305383
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagtt---gttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgttta 123  Q
    |||||||||||||||||||| |||| |||||| ||||   ||||  ||||  |||  ||| |||||||||| | | |||||||| ||    |||| ||||    
T  10305544 tttatgccaagatattattttggaggtttaaacagtttctgttgttgttttgatgcaaattttccgctgcaaaattaatgatgattttgaaggattttta 10305445  T
Q  124 ataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
     |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  10305444 ttaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 10305383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 10305984 - 10306145
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttg---ttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgttta 123  Q
    |||||||||||||||||||| |||| |||||| |||||   |||  ||||  |||  ||| |||||||||| | | |||||||| ||    |||| ||||    
T  10305984 tttatgccaagatattattttggaggtttaaacagttgctgttgttgttttgatgcaaattttccgctgcaaaattaatgatgattttgaaggatattta 10306083  T
Q  124 ataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
     |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  10306084 ttaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 10306145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 19599414 - 19599342
Alignment:
Q  77 tgataatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctattt 148  Q
    |||||||||||||||||| ||| |||||| | |||   |||||||| || |||||||||||||||||||||||    
T  19599414 tgataatattccgctgcagatttaatgataaattcgaaggatgttttattaaatagatttttatattctattt 19599342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 35963351 - 35963419
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctattt 148  Q
    |||||||||||||| ||| |||||| | |||   ||||||||||| |||||||||||||||||||||||    
T  35963351 aatattccgctgcagatttaatgataatttcgaaggatgtttaattaaatagatttttatattctattt 35963419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 1847861 - 1847794
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacaccctctttatact-cttattagttctacaaacggg 293  Q
    ||||||||||||| |||||||||||||| |||||||||| |   || |||| ||||||||||||||||    
T  1847861 cccatctatgaatattaggacactcatagtacaccctctctcacctacttagtagttctacaaacggg 1847794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 3290429 - 3290491
Alignment:
Q  115 ggatgtttaat-aaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||||||||| |||||| |||||||||||||||| ||||| |||||||||||| |||||||||    
T  3290429 ggatgtttaattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatg 3290491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 4449475 - 4449510
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcata 254  Q
    ||||||| ||||||||||||||||||||||||||||    
T  4449475 taggtctgcccatctatgaatcttaggacactcata 4449510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 8775299 - 8775233
Alignment:
Q  119 gtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  8775299 gtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 8775233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 9574922 - 9575009
Alignment:
Q  207 ccaatattctagtaggtctacccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggga 294  Q
    ||||| |||| | |||||| |||||||||||||||||||||||| |||| |||   || || | |||| | |||||||||||||||||    
T  9574922 ccaatgttctcgaaggtcttcccatctatgaatcttaggacacttataacacattatccttctcctctaagtagttctacaaacggga 9575009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 11395346 - 11395416
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| ||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  11395346 ggatgcttattaaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgg 11395416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 21744430 - 21744496
Alignment:
Q  119 gtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  21744430 gtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 21744496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 22066825 - 22066790
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcata 254  Q
    ||||||| ||||||||||||||||||||||||||||    
T  22066825 taggtctgcccatctatgaatcttaggacactcata 22066790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 15723850 - 15723915
Alignment:
Q  115 ggatgtttaat-aaatagatttttatat--tctatttcagaaatttgaaaa-tgtattgtgacatg 176  Q
    ||||||||||| ||||||||||||||||  ||||||| ||||||||||||| |||| |||||||||    
T  15723850 ggatgtttaattaaatagatttttatatgttctatttaagaaatttgaaaattgtagtgtgacatg 15723915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 9731215 - 9731182
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactca 252  Q
    |||||||||||||||||||||||||||| |||||    
T  9731215 taggtctacccatctatgaatcttaggatactca 9731182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 14583316 - 14583374
Alignment:
Q  116 gatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatg 176  Q
    |||||||| |||||||  ||||||||||||||| |||||||| || | |||||||||||||    
T  14583316 gatgtttattaaatag--ttttatattctatttaagaaattttaacaagtattgtgacatg 14583374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 1588074 - 1588142
Alignment:
Q  220 aggtctacccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaa 288  Q
    |||||| ||||||||||||| ||||||||||||||  |||| ||| || | |||||  |||||||||||    
T  1588074 aggtcttcccatctatgaatattaggacactcatagaacactctccttctcctcttggtagttctacaa 1588142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 3190615 - 3190583
Alignment:
Q  222 gtctacccatctatgaatcttaggacactcata 254  Q
    |||| ||||||||||||||||||||||||||||    
T  3190615 gtcttcccatctatgaatcttaggacactcata 3190583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 3327234 - 3327182
Alignment:
Q  134 ttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  3327234 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 3327182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 3735138 - 3735178
Alignment:
Q  220 aggtctacccatctatgaatcttaggacactcataatacac 260  Q
    |||||| || |||||||||||||||||||||||||| ||||    
T  3735138 aggtcttccgatctatgaatcttaggacactcataagacac 3735178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 254
Target Start/End: Original strand, 4786340 - 4786376
Alignment:
Q  218 gtaggtctacccatctatgaatcttaggacactcata 254  Q
    |||||||||||||||||||||||||| |||| |||||    
T  4786340 gtaggtctacccatctatgaatcttacgacaatcata 4786376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 16476768 - 16476829
Alignment:
Q  116 gatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtcc 179  Q
    |||||||| |||||||  ||||||||||||||| ||||||||  ||| ||| ||||||||||||    
T  16476768 gatgtttattaaatag--ttttatattctatttaagaaattttgaaaagtagtgtgacatgtcc 16476829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 23518359 - 23518284
Alignment:
Q  19 gttgaggcttttatgccaagatatta-tttggagttttaaatagttgttgacgtttcaatgataatattccgctgca 94  Q
    ||||||||||||||||||||||| || ||||||| ||||||   ||||||| ||||  |||||||||||| ||||||    
T  23518359 gttgaggcttttatgccaagataatattttggaggtttaaactattgttgatgttt-gatgataatattctgctgca 23518284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 24744 - 24929
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatga 107  Q
    ||||||||||||||||||||| ||||  ||||||||||| |||| |||||| |||||||||| ||||  |||||||||||||||||||||||||||||||    
T  24744 attattctggttgaggctttttatgcagagatattattttggaggtttaaacagttgttgacatttcgttgataatattccgctgcatattaaatgatga 24843  T
Q  108 gttcactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggatttatta 193  Q
     |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||    
T  24844 attcattggatgtttaataaatagatttttatattctatttcagaaatttgaaaatatagtgtgacatgcccatttggatttatta 24929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 23527079 - 23526894
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattatttgga-gttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatga 107  Q
    ||||||||||||||||||||| ||||||||||||||||| || | |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  23527079 attattctggttgaggctttttatgccaagatattattttgaaggtttaaacagttgtcgacgtttcgatgataatattccgctgcatattaaatgatga 23526980  T
Q  108 gttcactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggatttatta 193  Q
     |||| ||||||||||| |||||||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||    
T  23526979 tttcattggatgtttaacaaatagatttttatattctattccagaaatttgaaattgtagtgtgacatgcccatttggatttatta 23526894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 176
Target Start/End: Original strand, 21676123 - 21676272
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||||||||| |||| |||||||||| ||    
T  21676123 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgatgatttcattggatgtttatta 21676222  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtattgtgacatg 176  Q
    |||||  ||||||||||||||| ||  ||||||||||||||| |||||||||    
T  21676223 aatag--ttttatattctatttaagaaaaatttgaaaatgtagtgtgacatg 21676272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 42242356 - 42242483
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| || ||| ||||||||| |||   |||||||| |||||||||  |||||||| ||| ||| ||||||||||| ||    
T  42242356 tttatgccaagatattattttggaggttaaaacagttgttgaagttgtgatgataattttccgctgctaattaaatgttgatttctctggatgtttagta 42242455  T
Q  127 aatagatttttatattctatttcagaaa 154  Q
    |||||||||||||||||||||| |||||    
T  42242456 aatagatttttatattctatttaagaaa 42242483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 25401895 - 25401848
Alignment:
Q  218 gtaggtctacccatctatgaatcttaggacactcataatacaccctct 265  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||    
T  25401895 gtaggtctacccatctatgaatcttaggacactcataacacactctct 25401848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 22379072 - 22378952
Alignment:
Q  30 tatgccaagatattatttgga-gttttaaatagttgttgacgtttcaatgataata-ttccgctgcatattaaatgatgagttcactggatgtttaataa 127  Q
    |||||||||||||||||| || ||||| |  ||||||||| ||| | ||| ||||| |||||||||  |||||||||||| || | ||||||||| ||||    
T  22379072 tatgccaagatattattttgaagttttgatcagttgttgatgtt-cgatgttaataattccgctgccaattaaatgatgattttattggatgttttataa 22378974  T
Q  128 atagatttt-tatattctattt 148  Q
    ||||||||| ||||||||||||    
T  22378973 atagattttatatattctattt 22378952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 20315077 - 20315006
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacaccctctttatact--cttattagttctacaa 288  Q
    ||||||| |||||||||||||| |||||||||||||| |||| |||||||| ||  |||| |||||||||||    
T  20315077 taggtctgcccatctatgaatcctaggacactcataacacactctctttatgcttacttagtagttctacaa 20315006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 6728904 - 6728974
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaattt-gaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| | |||||| ||||||||| |||||||||||| |||||    
T  6728904 ggatgtttattaaatagatttt-atattctatttaataaattttgaaaatgtagtgtgacatgtccgtttgg 6728974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 22759852 - 22759922
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  22759852 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 22759922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 22880070 - 22880000
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  22880070 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 22880000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 33474542 - 33474612
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaat-ttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||| ||||||||||||||| |||||| ||||||||||| ||||||||| || |||||    
T  33474542 ggatgtttattaaataga-ttttatattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtttgg 33474612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 24669675 - 24669748
Alignment:
Q  115 ggatgtttaat-aaatagatttttata--ttctatttcagaaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||||| |||||||||||||||  |||||||| |||||||||||| |||| ||||||||| || |||||    
T  24669675 ggatgtttaattaaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatgcccgtttgg 24669748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 24739444 - 24739517
Alignment:
Q  115 ggatgtttaat-aaatagatttttata--ttctatttcagaaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||||| |||||||||||||||  |||||||| |||||||||||| |||| ||||||||| || |||||    
T  24739444 ggatgtttaattaaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatgcccgtttgg 24739517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 24752213 - 24752286
Alignment:
Q  115 ggatgtttaat-aaatagatttttata--ttctatttcagaaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||||| |||||||||||||||  |||||||| |||||||||||| |||| ||||||||| || |||||    
T  24752213 ggatgtttaattaaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatgcccgtttgg 24752286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 22509802 - 22509866
Alignment:
Q  115 ggatgtttaat-aaatagatttttata--ttctatttcagaaatttgaaaatgtattgtgacatg 176  Q
    ||||||||||| |||||||||||||||  |||||||| |||||||||||| |||| |||||||||    
T  22509802 ggatgtttaattaaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatg 22509866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 20549298 - 20549223
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacaccctctttatact--cttattagttctacaaacgg 292  Q
    ||||||| ||||||||||||||||||||||||||||  |||| |||| ||  ||  |||| |||||||||||||||    
T  20549298 taggtcttcccatctatgaatcttaggacactcatagcacactctctctacgcttacttagtagttctacaaacgg 20549223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 19008137 - 19008102
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcata 254  Q
    ||||||| ||||||||||||||||||||||||||||    
T  19008137 taggtctgcccatctatgaatcttaggacactcata 19008102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 19075500 - 19075430
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| ||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  19075500 ggatgcttattaaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgg 19075430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 21661881 - 21661819
Alignment:
Q  115 ggatgtttaat-aaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||||||||| |||||| |||||||||||||||| ||||| |||||||||||| |||||||||    
T  21661881 ggatgtttaattaaatag-tttttatattctatttaagaaaatttgaaaatgtagtgtgacatg 21661819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 43120211 - 43120145
Alignment:
Q  119 gtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  43120211 gtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 43120145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 24140956 - 24141029
Alignment:
Q  222 gtctacccatctatgaatcttaggacactcataatacaccctctttatac--tcttattagttctacaaacggg 293  Q
    |||| ||||| ||||||||||||||||||||||| |||| |||| ||  |  ||||| ||||||||||||||||    
T  24140956 gtctgcccatatatgaatcttaggacactcataacacactctctctacgctttcttactagttctacaaacggg 24141029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 758899 - 758963
Alignment:
Q  115 ggatgtttaat-aaatagatttttatat--tctatttcagaaatttgaaaatgtattgtgacatg 176  Q
    ||||||||||| ||||||||||||||||  | ||||| |||||||||||| |||| |||||||||    
T  758899 ggatgtttaattaaatagatttttatatattttatttaagaaatttgaaattgtagtgtgacatg 758963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 16523154 - 16523113
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacac 260  Q
    ||||||| || |||||||||||||||||||||||||| ||||    
T  16523154 taggtctgcctatctatgaatcttaggacactcataacacac 16523113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 24659599 - 24659531
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacaccctctttatac--tcttattagttctacaaacggg 293  Q
    ||||||||||||||||||||||||||||  |||| |||| ||  |  ||||| ||||||||||||||||    
T  24659599 cccatctatgaatcttaggacactcatagcacactctctctacgctttcttaatagttctacaaacggg 24659531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 34488175 - 34488248
Alignment:
Q  220 aggtctacccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggg 293  Q
    |||||| ||||||||||||||||||||||||| ||  || | ||| || | |||||  ||||||||||||||||    
T  34488175 aggtcttcccatctatgaatcttaggacactcgtagcacgctctccttctcctcttggtagttctacaaacggg 34488248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 28260482 - 28260556
Alignment:
Q  19 gttgaggcttttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgca 94  Q
    ||||||||||| ||||||||||||| ||| ||||||||||| | ||||||| ||||  ||||||||| |||||||||    
T  28260482 gttgaggcttt-atgccaagatattgttttggagttttaaacaattgttgatgttt-gatgataataatccgctgca 28260556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 28665282 - 28665318
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataa 255  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  28665282 taggtctgcccatctatgaatcttatgacactcataa 28665318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 30344822 - 30344870
Alignment:
Q  137 tatattctatttcagaaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||||||||||| |||||||||||| |||| ||||||||| || |||||    
T  30344822 tatattctatttaagaaatttgaaattgtagtgtgacatgcccgtttgg 30344870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 4306 - 4491
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatga-g 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||      
T  4306 attattctggttgaggcttttatgccaagatattgtttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacgatt 4405  T
Q  109 ttcactggatgtttaataaatagatttt-----tatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggattt 189  Q
    |||  ||||| ||| |||||||||||||     |||||||||||||||||||||||||||| | ||||||||| |||| |||||||    
T  4406 ttctttggatattttataaatagattttttatatatattctatttcagaaatttgaaaatgaagtgtgacatgcccatgtggattt 4491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 93 - 278
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatga-g 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||      
T  93 attattctggttgaggcttttatgccaagatattgtttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacgatt 192  T
Q  109 ttcactggatgtttaataaatagatttt-----tatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggattt 189  Q
    |||  ||||| ||| |||||||||||||     |||||||||||||||||||||||||||| | ||||||||| |||| |||||||    
T  193 ttctttggatattttataaatagattttttatatatattctatttcagaaatttgaaaatgaagtgtgacatgcccatgtggattt 278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 5707559 - 5707739
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgttt-caatgataatattccgctgcatattaaatgatgag 108  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||     
T  5707559 attattctggttg-ggcttttatgccaagatattgtttggagttttaaatagttgttgacgttttcaatgataatattccgctgcatattaaacgacgat 5707657  T
Q  109 tt-cactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggattt 189  Q
    || |  ||||| ||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||| |||||||    
T  5707658 tttctttggatattttataaatagatttttatattctatttcagaaatttgaaaatgaagtgtgacatgcccatgtggattt 5707739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 28 - 176
Target Start/End: Original strand, 21133917 - 21134066
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||||||||| |||| ||||| |||||||    
T  21133917 tttatgccaagatattattttggaggtttaaagagttgttgatgttttgatgataatattccgctgctaattaaatgatgatttcattggatatttaata 21134016  T
Q  127 aatagatttttatattctatttcagaaatttgaaaatgtattgtgacatg 176  Q
    |||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  21134017 aatagatttttatattctattttagaaatttgaaaatgtagtatgacatg 21134066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 36800099 - 36799949
Alignment:
Q  28 tttatgccaagatattattt-ggag-ttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaat 125  Q
    |||||||||||||||| ||| |||| ||||||| ||||||||| ||||  ||||||||||||||||||  | |||||||||| |||| || |||||||||    
T  36800099 tttatgccaagatattcttttggaggttttaaacagttgttgatgttttgatgataatattccgctgctaagtaaatgatgatttcattgaatgtttaat 36800000  T
Q  126 aaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatg 176  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  36799999 aaatagatttttatattctattttagaaatttgaaaatgtagtgtgacatg 36799949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 25590735 - 25590863
Alignment:
Q  28 tttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaataa 127  Q
    |||||||||||||||||||||||| |||||| | ||||||| |||| | |||||||||||||||||  || || |||||| |||| ||||||||||||||    
T  25590735 tttatgccaagatattatttggaggtttaaacaattgttgatgtttga-tgataatattccgctgctaataaattgatgatttcattggatgtttaataa 25590833  T
Q  128 atagatttttatattctatttcagaaattt 157  Q
    ||||||||||||||||||||| ||||||||    
T  25590834 atagatttttatattctatttaagaaattt 25590863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 43692929 - 43692780
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||||||||| |||| |||||||||| ||    
T  43692929 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgatgatttcattggatgtttatta 43692830  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtattgtgacatg 176  Q
    |||||  ||||||||||||||| ||  ||||||||||||||| |||||||||    
T  43692829 aatag--ttttatattctatttaagaaaaatttgaaaatgtagtgtgacatg 43692780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 28 - 176
Target Start/End: Original strand, 27368172 - 27368321
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| ||||  ||||| ||||||||| ||||  ||||||||||||||||||  ||||||||| || |||| |||||||||| ||    
T  27368172 tttatgccaagatattattttggaggcttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgacgatttcattggatgtttatta 27368271  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtattgtgacatg 176  Q
    |||||  ||||||||||||||| ||  |||||| |||||||| |||||||||    
T  27368272 aatag--ttttatattctatttaagaaaaatttaaaaatgtagtgtgacatg 27368321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 22809511 - 22809348
Alignment:
Q  23 aggcttttatgccaagatattatt-tggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtt 121  Q
    |||||||||||||| ||  ||||| ||||| |||||| ||||||||  ||||  |||| |||||||||||||  | |||||||||| ||   ||||||||    
T  22809511 aggcttttatgccaggaatttattatggaggtttaaacagttgttgttgttttgatgagaatattccgctgctaaataaatgatgattttgatggatgtt 22809412  T
Q  122 taataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    || |||||||| ||||||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  22809411 tattaaataga-ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 22809348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 27541474 - 27541398
Alignment:
Q  213 ttctagtaggtctacccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaa 289  Q
    ||||| |||||| | |||||||||||||||||||||||||||  |||| |||| |  ||||||| ||||||||||||    
T  27541474 ttctattaggtcgaaccatctatgaatcttaggacactcatagaacactctctctccactcttagtagttctacaaa 27541398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 9762005 - 9761970
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcata 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  9762005 taggtctacccatctatgaatcttaggacactcata 9761970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 20964652 - 20964722
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaat-ttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||| ||||||||||||||| |||||| ||||||||||| ||||||||| || |||||    
T  20964652 ggatgtttattaaataga-ttttatattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtttgg 20964722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 24503723 - 24503653
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  24503723 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 24503653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 25036742 - 25036812
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  25036742 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 25036812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 25040849 - 25040919
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  25040849 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 25040919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 31754979 - 31754909
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  31754979 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 31754909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 6031693 - 6031632
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| |||||||||    
T  6031693 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatg 6031632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 265
Target Start/End: Complemental strand, 31804385 - 31804327
Alignment:
Q  207 ccaatattctagtaggtctacccatctatgaatcttaggacactcataatacaccctct 265  Q
    ||||| |||| |||||||||||||||||| ||| ||||||||||||||| |||| ||||    
T  31804385 ccaatgttcttgtaggtctacccatctataaattttaggacactcataacacactctct 31804327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 12950618 - 12950577
Alignment:
Q  213 ttctagtaggtctacccatctatgaatcttaggacactcata 254  Q
    |||| |||||||| ||||||||||||||||||||||||||||    
T  12950618 ttcttgtaggtcttcccatctatgaatcttaggacactcata 12950577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 293
Target Start/End: Original strand, 28929194 - 28929258
Alignment:
Q  228 ccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggg 293  Q
    |||||||||||||||||||||||||||||  ||||||| |  || |||| ||||||||||||||||    
T  28929194 ccatctatgaatcttaggacactcataatcaaccctctct-cacacttagtagttctacaaacggg 28929258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 15339782 - 15339814
Alignment:
Q  218 gtaggtctacccatctatgaatcttaggacact 250  Q
    |||||||||||||||||||||||||||||||||    
T  15339782 gtaggtctacccatctatgaatcttaggacact 15339814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 23062017 - 23061948
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaatt-tgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||  ||||||||||||||| ||||||| |||||||||| ||||||||| || |||||    
T  23062017 ggatgtttattaaatag--ttttatattctatttaagaaattatgaaaatgtagtgtgacatgcccgtttgg 23061948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 29143424 - 29143496
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacg 291  Q
    |||||||  |||||||||||||||||||||||||||| |||| ||||  |   ||||| ||||||||||||||    
T  29143424 taggtctgtccatctatgaatcttaggacactcataacacactctctacactttcttagtagttctacaaacg 29143496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 18121845 - 18121810
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcata 254  Q
    ||||||| ||||||||||||||||||||||||||||    
T  18121845 taggtctgcccatctatgaatcttaggacactcata 18121810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 23029684 - 23029754
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| ||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  23029684 ggatgcttattaaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgg 23029754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 17198385 - 17198423
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacaccctct 265  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  17198385 cccatctatgaatcttaggacactcataacacactctct 17198423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 23169843 - 23169873
Alignment:
Q  14 ttctggttgaggcttttatgccaagatatta 44  Q
    |||||||||||||||||||||||||||||||    
T  23169843 ttctggttgaggcttttatgccaagatatta 23169873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 23581100 - 23581130
Alignment:
Q  14 ttctggttgaggcttttatgccaagatatta 44  Q
    |||||||||||||||||||||||||||||||    
T  23581100 ttctggttgaggcttttatgccaagatatta 23581130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 25108123 - 25108184
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaattt-gaaaatgtattgtgacatg 176  Q
    ||||||||| ||||||| ||||||||||| |||| |||||||| ||||||||| |||||||||    
T  25108123 ggatgtttattaaatag-tttttatattcaatttaagaaattttgaaaatgtagtgtgacatg 25108184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 30412139 - 30412185
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacaccctct 265  Q
    ||||||| |||||||||||||||||||| |||||||| |||| ||||    
T  30412139 taggtctgcccatctatgaatcttaggatactcataacacactctct 30412185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 13776935 - 13776992
Alignment:
Q  188 ttattagtgtgggtcttgtccaatattctagtaggtctacccatctatgaatcttagg 245  Q
    ||||||||||||| | || ||||| |||  ||||||||| ||||||||||||||||||    
T  13776935 ttattagtgtggggcctgaccaatgttcatgtaggtctatccatctatgaatcttagg 13776992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 17635394 - 17635326
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacaccctctttata--ctcttattagttctacaaacggg 293  Q
    |||||||||||||||||||||| |||||  |||| |||| | ||  |||||| ||||||||||||||||    
T  17635394 cccatctatgaatcttaggacaatcataccacactctctctctacgctcttagtagttctacaaacggg 17635326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 17743094 - 17743033
Alignment:
Q  229 catctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaac 290  Q
    ||||||| |||||||||||||||||   ||||||||| | | |||||| |||||||||||||    
T  17743094 catctataaatcttaggacactcatggcacaccctctctctgctcttagtagttctacaaac 17743033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 26667825 - 26667889
Alignment:
Q  228 ccatctatgaatcttaggacactcataatacaccctctttatact--cttattagttctacaaac 290  Q
    ||||||||| ||||||||||||||||| ||||| |||| ||| ||  |||| |||||||||||||    
T  26667825 ccatctatggatcttaggacactcatagtacactctctctatgcttacttagtagttctacaaac 26667889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 22379101 - 22379069
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactc 251  Q
    ||||||| |||||||||||||||||||||||||    
T  22379101 taggtctgcccatctatgaatcttaggacactc 22379069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 1664 - 1484
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgttt-caatgataatattccgctgcatattaaatgatgag 108  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||     
T  1664 attattttggttg-ggcttttatgccaagatattgtttggagttttaaatagttgttgacgttttcaatgataatattccgctgcatattaaacgacgat 1566  T
Q  109 tt-cactggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggattt 189  Q
    || |  ||||| ||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||| |||||||    
T  1565 tttctttggatattttataaatagatttttatattctatttcagaaatttgaaaatgaagtgtgacatgcccatgtggattt 1484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 33096581 - 33096432
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  |||||||||||||||||| |||||||||||   |||| |||||||||||||    
T  33096581 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgcttattaaatgatagtttcattggatgtttaata 33096482  T
Q  127 aatagatttttatattctatttcagaaatttgaaaatgtattgtgacatg 176  Q
    |||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  33096481 aatagatttttatattctattttagaaatctgaaaatgtagtgtgacatg 33096432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 37880942 - 37880794
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||| ||||||||||||||| |||| |||||| ||||||||| ||||  |||||||||||||| |||  |||||||||||| |||| ||||||||||| |    
T  37880942 tttacgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccg-tgctaattaaatgatgatttcattggatgtttaaca 37880844  T
Q  127 aatagatttttatattctatttcagaaattt-gaaaatgtattgtgacatg 176  Q
    |||||||||||||||||||||| |||||||| ||||||||| | |||||||    
T  37880843 aatagatttttatattctattt-agaaattttgaaaatgtagtctgacatg 37880794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 899147 - 899027
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| | ||||||| |||| | |||||||||||||||||  |||||||| ||| |||  ||||||| |||||    
T  899147 tttatgccaagatattattttggaggtttaaacaattgttgatgtttga-tgataatattccgctgctgattaaatgttgatttctatggatgtgtaata 899049  T
Q  127 aatagatttttatattctattt 148  Q
    ||||||||||||||||||||||    
T  899048 aatagatttttatattctattt 899027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 31664541 - 31664403
Alignment:
Q  29 ttatgccaagatattatttggagttttaaatag-ttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaataa 127  Q
    ||||||||||||||| ||||||||||||||    ||||||| |||| |   |||||||||||||||   ||||||||||| |||| ||||||||||||||    
T  31664541 ttatgccaagatattgtttggagttttaaaaccattgttgatgtttgatgaataatattccgctgctgtttaaatgatgacttcattggatgtttaataa 31664442  T
Q  128 atagatttttatattctatttcagaaatttgaaaatgta 166  Q
    || |||||||||||||||||| | ||||||  |||||||    
T  31664441 atggatttttatattctatttaataaattttgaaatgta 31664403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 53482785 - 53482710
Alignment:
Q  114 tggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttggattt 189  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||| |||||||    
T  53482785 tggatattttataaatagatttttatattctatttcagaaatttgaaaatgaagtgtgacatgcccatgtggattt 53482710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 46045470 - 46045599
Alignment:
Q  28 tttatgccaagatattatttggag-ttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    ||||||||||||| |||||||||| |||| || | | |||||  ||| | |||||||||||||||||   |||| |||||| |||| |||||||||||||    
T  46045470 tttatgccaagatgttatttggaggtttttaacaatcgttgatatttga-tgataatattccgctgccatttaattgatgatttcattggatgtttaata 46045568  T
Q  127 aatagatttttatattctatttcagaaattt 157  Q
    |||||||||||||||||||||| || |||||    
T  46045569 aatagatttttatattctatttaagtaattt 46045599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 14480083 - 14479920
Alignment:
Q  23 aggcttttatgccaagatattatt-tggag-ttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgt 120  Q
    ||||||||||||||| || ||||| ||||| ||||||||||||||||  ||||  |||| ||||||| |||||  | |||||| ||| || | |||||||    
T  14480083 aggcttttatgccaatattttattatggaggttttaaatagttgttgttgttttgatgagaatattctgctgctaaataaatggtgatttga-tggatgt 14479985  T
Q  121 ttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  14479984 ttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 14479920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 14062444 - 14062373
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||||||||||| |||||||||||| |||||    
T  14062444 ggatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgtccgtttgg 14062373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 17217355 - 17217421
Alignment:
Q  188 ttattagtgtgggtcttgtccaatattctagtaggtctacccatctatgaatcttaggacactcata 254  Q
    ||||||||||||||| |||||||| ||| ||||||||||| |||||||||||||||||| |||||||    
T  17217355 ttattagtgtgggtcatgtccaatgttccagtaggtctacacatctatgaatcttaggaaactcata 17217421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 294
Target Start/End: Original strand, 25095129 - 25095236
Alignment:
Q  189 tattagtgtgggtcttgtccaatattctagtaggtctacccatctatgaatcttaggacactcataatacaccctctttatact--cttattagttctac 286  Q
    ||||||||||||||||||||||  |||   ||||| | ||||||||||||||||||||||||||||| |||| |||| ||| ||   ||| |||||||||    
T  25095129 tattagtgtgggtcttgtccaaggttcccttaggttttcccatctatgaatcttaggacactcataacacactctctctatccttatttagtagttctac 25095228  T
Q  287 aaacggga 294  Q
    ||||||||    
T  25095229 aaacggga 25095236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 157
Target Start/End: Complemental strand, 33198499 - 33198369
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| || ||| |||||| || |||   |||||||| |||||||||  |||||||| ||| |||     ||||||| ||    
T  33198499 tttatgccaagatattattttggaggttaaaacagttgtagaagttgtgatgataattttccgctgctaattaaatgttgatttcttcaaatgtttacta 33198400  T
Q  127 aatagatttttatattctatttcagaaattt 157  Q
    |||||||||||||||||||||| ||||||||    
T  33198399 aatagatttttatattctatttaagaaattt 33198369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 293
Target Start/End: Original strand, 7582848 - 7582915
Alignment:
Q  226 acccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggg 293  Q
    |||||| ||||||||||||||||||||||  ||||||||| | | |||||| ||||||||||||||||    
T  7582848 acccatttatgaatcttaggacactcatagcacaccctctctctgctcttagtagttctacaaacggg 7582915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 17336603 - 17336556
Alignment:
Q  218 gtaggtctacccatctatgaatcttaggacactcataatacaccctct 265  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17336603 gtaggtttacccatctatgaatcttaggacactcataacacaccctct 17336556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 43286477 - 43286550
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctattt 148  Q
    |||| |||||||||||||| ||| |||||| | ||||  ||||||||||| |||||||||||||||||||||||    
T  43286477 atgagaatattccgctgcagatttaatgataaattcaaaggatgtttaattaaatagatttttatattctattt 43286550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 10687568 - 10687508
Alignment:
Q  125 taaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||||||||||||||||||||||| ||||||||||||  ||| ||||||||| || |||||    
T  10687568 taaatagatttttatattctatttgagaaatttgaaatagtagtgtgacatgcccgtttgg 10687508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 10901208 - 10901148
Alignment:
Q  125 taaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||||||||||||||||||||||| ||||||||||||  ||| ||||||||| || |||||    
T  10901208 taaatagatttttatattctatttgagaaatttgaaatagtagtgtgacatgcccgtttgg 10901148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 17000781 - 17000849
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctattt 148  Q
    |||||||||||||| ||| |||||| | ||||  ||||||||||| |||||||||||||||||||||||    
T  17000781 aatattccgctgcagatttaatgataatttcaaaggatgtttaattaaatagatttttatattctattt 17000849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 37839659 - 37839730
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgga 186  Q
    ||||| ||| |||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||| ||||||    
T  37839659 ggatgcttattaaatagatttt-atattctatttgagaaaatttgaaaatgtagtgtgacatgtccgtttgga 37839730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 41939995 - 41940066
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaat-ttgaaaatgtattgtgacatgtccatttgga 186  Q
    |||| |||| |||||||||||| ||||||||||| |||||| ||||||||||| ||||||||| |||||||||    
T  41939995 ggatatttattaaatagatttt-atattctatttaagaaatcttgaaaatgtagtgtgacatgcccatttgga 41940066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 55503806 - 55503876
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  55503806 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 55503876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 176
Target Start/End: Complemental strand, 30395642 - 30395538
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaataaatagattt--ttatattctatttcagaaattt--gaaaatgtattgtg 171  Q
    |||||| |||||||||||  | |||||| ||| |||  ||||||||| ||||||||||||  ||||||||||||| ||||||||   |||||||| ||||    
T  30395642 atgatattattccgctgctgaataaatgttgatttctatggatgtttcataaatagattttcttatattctatttaagaaattttgaaaaatgtagtgtg 30395543  T
Q  172 acatg 176  Q
    |||||    
T  30395542 acatg 30395538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 11846687 - 11846638
Alignment:
Q  9 gattattctggttgaggcttttatgccaagatattatttggagttttaaa 58  Q
    |||| |||||||||||||||||||||| ||||||| | ||||||||||||    
T  11846687 gatttttctggttgaggcttttatgccgagatattttatggagttttaaa 11846638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 185
Target Start/End: Complemental strand, 14697758 - 14697658
Alignment:
Q  85 ttccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccattt 183  Q
    |||||||||| |||||||||||| ||    ||| ||||| ||||| |||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||    
T  14697758 ttccgctgcaaattaaatgatgactttgaaggacgtttattaaattgatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgttt 14697660  T
Q  184 gg 185  Q
    ||    
T  14697659 gg 14697658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 15165320 - 15165385
Alignment:
Q  229 catctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggga 294  Q
    ||||||||||||||||||||||||||  |||||||||    ||||||| ||| |||||||||||||    
T  15165320 catctatgaatcttaggacactcatagcacaccctctccccactcttagtagatctacaaacggga 15165385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 17025937 - 17025888
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacaccctcttta 268  Q
    ||||||| ||||||||||||||||||||||||||||  |||| |||||||    
T  17025937 taggtctgcccatctatgaatcttaggacactcatagcacactctcttta 17025888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 41529727 - 41529787
Alignment:
Q  116 gatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    |||||||| |||||||||||| ||||||||||| ||||| |||||||||||| |||||||||    
T  41529727 gatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatg 41529787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 16220858 - 16220705
Alignment:
Q  23 aggcttttatgccaagatattatt-tggagttttaaatagttgttgacgtttcaatgat---aatattccgctgcatattaaatgatgagttcactggat 118  Q
    |||||||||||||||||| | ||| ||||| |||||||||||||||  |||    ||||   ||| |||||||||| | | |||||||| ||    ||||    
T  16220858 aggcttttatgccaagatttaattatggagatttaaatagttgttgttgttgttttgatgcaaattttccgctgcaaaattaatgatgattttgaaggat 16220759  T
Q  119 gtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtga 172  Q
    ||||| |||||||||||| ||||||||||| ||||| |||||||||||| |||||    
T  16220758 gtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtga 16220705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 2585816 - 2585878
Alignment:
Q  115 ggatgtttaat-aaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||||||||| |||||| |||||||||||||||| ||||| |||||||||||| |||||||||    
T  2585816 ggatgtttaattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatg 2585878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 4170001 - 4169935
Alignment:
Q  119 gtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  4170001 gtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 4169935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 5679748 - 5679783
Alignment:
Q  220 aggtctacccatctatgaatcttaggacactcataa 255  Q
    |||||| |||||||||||||||||||||||||||||    
T  5679748 aggtcttcccatctatgaatcttaggacactcataa 5679783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 12931367 - 12931296
Alignment:
Q  116 gatgtttaat-aaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||||||||| |||||| |||||||||||||||| ||||| ||||||| |||| ||||||||| || |||||    
T  12931367 gatgtttaattaaatagttttttatattctatttaagaaattttgaaattgtagtgtgacatgcccgtttgg 12931296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 31132421 - 31132487
Alignment:
Q  119 gtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  31132421 gtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 31132487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Original strand, 8056168 - 8056198
Alignment:
Q  10 attattctggttgaggcttttatgccaagat 40  Q
    |||||||||||||||||||||||||||||||    
T  8056168 attattctggttgaggcttttatgccaagat 8056198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 14485033 - 14484974
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatg 176  Q
    ||||||||| |||||||  ||||||||||||||| ||||||||  ||||||| |||||||||    
T  14485033 ggatgtttattaaatag--ttttatattctatttaagaaattttgaaatgtagtgtgacatg 14484974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 253
Target Start/End: Complemental strand, 24639020 - 24638986
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcat 253  Q
    ||||||||||||||||||||| |||||||||||||    
T  24639020 taggtctacccatctatgaatattaggacactcat 24638986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 8833277 - 8833228
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtattgtgacatgtccattt 183  Q
    ||||||||||||||| ||||||||  ||| ||| ||||||||||||||||    
T  8833277 ttttatattctatttaagaaattttgaaaagtagtgtgacatgtccattt 8833228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 11171855 - 11171928
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctattt 148  Q
    |||| |||||||||||||| ||| |||||  | |||   ||||||||||| |||||||||||||||||||||||    
T  11171855 atgagaatattccgctgcagatttaatgacaatttcgaaggatgtttaattaaatagatttttatattctattt 11171928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 13909408 - 13909465
Alignment:
Q  230 atctatgaatcttaggacactcataatacaccctctttatactcttattagttctaca 287  Q
    |||||||||||||||||||||||||  ||||||||| ||  ||| || ||||||||||    
T  13909408 atctatgaatcttaggacactcatagcacaccctctctacgctcatagtagttctaca 13909465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 17710226 - 17710267
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcataatacac 260  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||    
T  17710226 taggtctgcccatatatgaatcttaggacactcataacacac 17710267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Complemental strand, 19605046 - 19605013
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacac 260  Q
    ||||||||||||||||||||||||||||| ||||    
T  19605046 cccatctatgaatcttaggacactcataacacac 19605013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 23725453 - 23725520
Alignment:
Q  115 ggatgtttaat-aaatagatttttata--ttctatttcagaaatttgaaaatgtattgtgacatgtcc 179  Q
    ||||||||||| ||||| |||||||||  |||||||| |||||||||||| |||| |||| |||||||    
T  23725453 ggatgtttaattaaataaatttttatatattctatttaagaaatttgaaattgtagtgtggcatgtcc 23725520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 38982701 - 38982753
Alignment:
Q  134 ttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  38982701 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 38982753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 40908123 - 40908052
Alignment:
Q  114 tggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||||||||| |||||||| ||| ||||||||||| ||||| ||| |||||||| ||||||||| || |||||    
T  40908123 tggatgtttattaaataga-tttcatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttgg 40908052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 29550467 - 29550330
Alignment:
Q  19 gttgaggcttttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactgga 117  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||||||| |||| | |||| ||||||||||||  |||||||||||| |||| ||||    
T  29550467 gttgaggcttt-atgccaagatattgttttggagttttaaatagttgttgatgtttga-tgatgatattccgctgctgattaaatgatgatttcattgga 29550370  T
Q  118 tgtttaataaatagatttttatattctatttcagaaattt 157  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  29550369 tgtttaataaatagatttttacattctatttaagaaattt 29550330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 176
Target Start/End: Original strand, 24123899 - 24124048
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||||||||| |||| |||||||||| ||    
T  24123899 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgatgatttcattggatgtttatta 24123998  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtattgtgacatg 176  Q
    |||||  ||||||||||||||| ||  ||||||||||||||| |||||||||    
T  24123999 aatag--ttttatattctatttaagaaaaatttgaaaatgtagtgtgacatg 24124048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 157
Target Start/End: Complemental strand, 49162754 - 49162625
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| ||||||||||| | ||||||| |||| | |||||||||||||||||  |||||||| ||| |||  |||||||||||||    
T  49162754 tttatgccaagatattattttggagttttaaacaattgttgatgtttga-tgataatattccgctgctgattaaatgttgatttctatggatgtttaata 49162656  T
Q  127 aatagatttttatattctatttcagaaattt 157  Q
    |||||||||||||||||||||| ||||||||    
T  49162655 aatagatttttatattctatttaagaaattt 49162625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 28 - 157
Target Start/End: Complemental strand, 18957364 - 18957234
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |  ||| ||||||||| ||||  ||||||||||||||||||  |||||||| ||| |||  |||||||||||||    
T  18957364 tttatgccaagatattattttggaggtcaaaacagttgttgatgttttgatgataatattccgctgctaattaaatgttgatttctttggatgtttaata 18957265  T
Q  127 aatagatttttatattctatttcagaaattt 157  Q
    |||||||||||||||||||||| ||||||||    
T  18957264 aatagatttttatattctatttaagaaattt 18957234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 12418935 - 12418785
Alignment:
Q  28 tttatgccaagatattatttg-gagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    ||||||||| ||| ||||||  ||| |||||| ||||||||  ||||  ||||||||||||||||||  | |||||||||| |||| |||||||||||||    
T  12418935 tttatgccatgattttattttcgaggtttaaacagttgttgttgttttgatgataatattccgctgctaaataaatgatgatttcaatggatgtttaata 12418836  T
Q  127 aatagatttttatattctatttca-gaaatttgaaaatgtattgtgacatg 176  Q
    |||||||||||||||||||||| | ||| ||| |||| |||||||||||||    
T  12418835 aatagatttttatattctatttaaggaattttaaaaaagtattgtgacatg 12418785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 14292330 - 14292161
Alignment:
Q  23 aggcttttatgccaagatattatt-tggagttttaaatagtt---gttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggat 118  Q
    |||||||||||||||||  ||||| ||||| |||||| ||||   ||||  ||||  |||| |||||||||||||| ||| |||||| | ||    ||||    
T  14292330 aggcttttatgccaagaatttattatggaggtttaaacagttattgttgttgttttgatgagaatattccgctgcagatttaatgataattttggaggat 14292231  T
Q  119 gtttaat-aaatagatttttatattctatttcagaaa--tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||| ||||||||||||||||||||||| |||||  |||||||||||| ||||||||| || |||||    
T  14292230 gtttaattaaatagatttttatattctatttaagaaaattttgaaaatgtagtgtgacatgcccgtttgg 14292161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 20377867 - 20377987
Alignment:
Q  28 tttatgccaagatattatttggag-ttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| ||| |||||||   ||||||  |||| | |||||||||||||||||  |||||||| |||  ||  |||||||||||||    
T  20377867 tttatgccaagatattattttgaggttttaaactattgttggtgtttga-tgataatattccgctgctgattaaatgttgatgtctatggatgtttaata 20377965  T
Q  127 aatagatttttatattctattt 148  Q
    ||||| ||| ||||||||||||    
T  20377966 aatagttttctatattctattt 20377987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 14542398 - 14542229
Alignment:
Q  23 aggcttttatgccaagatattatt-tggagttttaaatagtt---gttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggat 118  Q
    |||||||||||||||||  ||||| ||||| |||||| ||||   ||||  ||||  |||| |||||||||||||| ||| |||||| | ||    ||||    
T  14542398 aggcttttatgccaagaatttattatggaggtttaaacagttattgttgttgttttgatgagaatattccgctgcagatttaatgataattttgaaggat 14542299  T
Q  119 gtttaat-aaatagatttttatattctatttcagaaa--tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||| ||||||||||||||||||||||| |||||  ||| |||||||| ||||||||| || |||||    
T  14542298 gtttaattaaatagatttttatattctatttaagaaaattttaaaaatgtagtgtgacatgcccgtttgg 14542229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 19908859 - 19908925
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggg 293  Q
    |||||||||||||||||||||||||| |||||||||| | |  ||||||| ||||| ||||||||||    
T  19908859 cccatctatgaatcttaggacactcacaatacaccctatctccactcttagtagttatacaaacggg 19908925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 2270877 - 2270980
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtcc 179  Q
    |||||||||||||| ||||| |||||| ||    ||||||||| ||||||| |||||||||||||||| ||||| |||||||||||| ||||||||| ||    
T  2270877 aatattccgctgcaaattaa-tgatgattttgaaggatgtttattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 2270974  T
Q  180 atttgg 185  Q
     |||||    
T  2270975 gtttgg 2270980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 41508999 - 41509071
Alignment:
Q  220 aggtctacccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacggg 293  Q
    ||||| |||||||||||||||||||||||||||||| |||| |||| |   |||||| ||||||||||||||||    
T  41508999 aggtcaacccatctatgaatcttaggacactcataacacactctctct-cgctcttagtagttctacaaacggg 41509071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 2167258 - 2167222
Alignment:
Q  218 gtaggtctacccatctatgaatcttaggacactcata 254  Q
    |||||||||||||||||||||||||||||||||||||    
T  2167258 gtaggtctacccatctatgaatcttaggacactcata 2167222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 11957268 - 11957371
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaataaatagattt--ttatattctatttcagaaa-tttgaaaatgtattgtga 172  Q
    |||||| |||||||||||  | |||||| ||| |||  ||||||||| ||||||||||||  |||||||| |||| ||||| |||||||||||| |||||    
T  11957268 atgatattattccgctgctgaataaatgttgatttctatggatgtttcataaatagattttcttatattcaatttaagaaattttgaaaatgtagtgtga 11957367  T
Q  173 catg 176  Q
    ||||    
T  11957368 catg 11957371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 54900728 - 54900822
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    |||||||||||||| ||||| |||||| ||    ||||||||| ||||||| |||||||||||||||| ||||| |||||||||||| |||||||||    
T  54900728 aatattccgctgcaaattaa-tgatgattttgaaggatgtttattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatg 54900822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 40602 - 40532
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaat-ttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| |||||| ||||||||||| ||||||||| || |||||    
T  40602 ggatgtttattaaatagatttt-atattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtttgg 40532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 2249686 - 2249756
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  2249686 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 2249756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 16245285 - 16245250
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcata 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  16245285 taggtctacccatctatgaatcttaggacactcata 16245250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 18757694 - 18757755
Alignment:
Q  123 aataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||||||| |||| |||||||||||| ||||||||| || |||||    
T  18757694 aataaatag-tttttatattctatttaagaattttgaaaatgtagtgtgacatgcccgtttgg 18757755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 20187159 - 20187086
Alignment:
Q  115 ggatgtttaat-aaatagatttttatat--tctatttcagaaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||||| ||||||||||||||||  ||||||| |||||||||||| |||| ||||||||| || |||||    
T  20187159 ggatgtttaattaaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatgcccgtttgg 20187086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 21302453 - 21302494
Alignment:
Q  213 ttctagtaggtctacccatctatgaatcttaggacactcata 254  Q
    |||| |||||||| ||||||||||||||||||||||||||||    
T  21302453 ttcttgtaggtcttcccatctatgaatcttaggacactcata 21302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 5840777 - 5840706
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgga 186  Q
    ||||| ||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || ||||||    
T  5840777 ggatgcttattaaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgga 5840706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 45221430 - 45221500
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| ||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  45221430 ggatgcttattaaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgg 45221500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 253
Target Start/End: Original strand, 8170367 - 8170401
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcat 253  Q
    ||||||| |||||||||||||||||||||||||||    
T  8170367 taggtctgcccatctatgaatcttaggacactcat 8170401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 16802992 - 16803029
Alignment:
Q  9 gattattctggttgaggcttttatgccaagatattatt 46  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  16802992 gatttttctggttgaggcttttatgccaagattttatt 16803029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 18719760 - 18719820
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  18719760 taaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 18719820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 19171426 - 19171385
Alignment:
Q  213 ttctagtaggtctacccatctatgaatcttaggacactcata 254  Q
    |||| |||||||||||| ||||||||||||||| ||||||||    
T  19171426 ttcttgtaggtctacccttctatgaatcttagggcactcata 19171385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 15518551 - 15518499
Alignment:
Q  134 ttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  15518551 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 15518499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 22698 - 22850
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||||||||| |||| |||||||||| ||    
T  22698 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgatgatttcattggatgtttatta 22797  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtattgtgacatgtcc 179  Q
    |||||  ||||||||||||||| ||  ||||||||| ||||| ||||||||||||    
T  22798 aatag--ttttatattctatttaagaaaaatttgaatatgtagtgtgacatgtcc 22850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 19878 - 20030
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| ||||  ||||| ||||||||| ||||  ||||||||||||||||||  ||||||||| || |||| |||||||||| ||    
T  19878 tttatgccaagatattattttggaggcttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgaagatttcattggatgtttatta 19977  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtattgtgacatgtcc 179  Q
    |||||  ||||||||||||||| ||  ||||||||| ||||| ||||||||||||    
T  19978 aatag--ttttatattctatttaagaaaaatttgaatatgtagtgtgacatgtcc 20030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 157
Target Start/End: Complemental strand, 40833 - 40704
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| | ||||||| |||| | |||||||||||||||||  |||||||| ||| |||  ||||||| |||||    
T  40833 tttatgccaagatattattttggaggtttaaacaattgttgatgtttga-tgataatattccgctgctgattaaatgttgatttctatggatgtgtaata 40735  T
Q  127 aatagatttttatattctatttcagaaattt 157  Q
    |||||||||||||||||||||| ||||||||    
T  40734 aatagatttttatattctatttaagaaattt 40704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 102271 - 102410
Alignment:
Q  19 gttgaggcttttatgccaagatatta-tttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactgga 117  Q
    ||||||||||| |||||||||||||  |||||||||||| |||||||||||  ||| | |||||||||||||||||  |||||||||||| || | ||||    
T  102271 gttgaggcttt-atgccaagatattgctttggagttttagatagttgttgatatttga-tgataatattccgctgctgattaaatgatgattttattgga 102368  T
Q  118 tgtttaataaataga--tttttatattctatttcagaaattt 157  Q
    ||||||||||||| |  |||||| ||||||||| ||||||||    
T  102369 tgtttaataaataaatttttttacattctatttaagaaattt 102410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 16506 - 16410
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    |||||||||||||| ||| |||||||| ||    ||||||||| |||||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  16506 aatattccgctgcaaatttaatgatgattttgaaggatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatg 16410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 21109 - 21239
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| | ||||||| |||| | |||||||||||| ||||  |||||||| | | |||  |||||||||||||    
T  21109 tttatgccaagatattattttggaggtttaaacaattgttgatgtttga-tgataatattccactgctgattaaatgttaacttccgtggatgtttaata 21207  T
Q  127 aataga-tttttatattctatttcagaaattt 157  Q
    |||||| |||||||||||| ||| ||||||||    
T  21208 aatagattttttatattctttttaagaaattt 21239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 27948 - 28078
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaata 126  Q
    |||||||||||||||||||| |||| |||||| | ||||||| |||| | |||||||||||| ||||  |||||||| | | |||  |||||| ||||||    
T  27948 tttatgccaagatattattttggaggtttaaacaattgttgatgtttga-tgataatattccactgctgattaaatgttaacttccgtggatgattaata 28046  T
Q  127 aataga-tttttatattctatttcagaaattt 157  Q
    |||||| |||||||||||||||| ||||||||    
T  28047 aatagattttttatattctatttaagaaattt 28078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 125084 - 125190
Alignment:
Q  81 aatattccgctgcatatta-aatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtc 178  Q
    |||||||||||||| |||  |||||||| |||   ||||||||| |||||||||||||||||||||||| ||||| |||||||||||| ||||||||| |    
T  125084 aatattccgctgcaaattttaatgatgatttcgaaggatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgcc 125183  T
Q  179 catttgg 185  Q
    | |||||    
T  125184 cgtttgg 125190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 185
Target Start/End: Original strand, 74754 - 74909
Alignment:
Q  31 atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaatgatgagttcactggatgtttaataaat 129  Q
    ||||||| ||||||||| |||| |||||| | ||||||| |||| | |||||||||||||||||  |||||||| ||| | |  |||||||||||| |||    
T  74754 atgccaaaatattattttggaggtttaaacaattgttgatgtttga-tgataatattccgctgctgattaaatgctgattactatggatgtttaatgaat 74852  T
Q  130 agatttttatattctatttcagaaa-tttga-aaatgtattgtgacatgtccatttgg 185  Q
    ||| ||||||||||||||| ||||| ||||| ||||||| ||||||||| || |||||    
T  74853 aga-ttttatattctatttaagaaattttgataaatgtagtgtgacatgcccgtttgg 74909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 32237 - 32346
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttca-gaaatttgaaaatgtattgtgaca 174  Q
    |||| |||||||||||||  | |||||||||| |||  |||||| ||||||||||| |||||||||||||||| | ||| |||||||||||| |||||||    
T  32237 atgagaatattccgctgctgaataaatgatgatttcgttggatgcttaataaatag-tttttatattctatttaaggaattttgaaaatgtagtgtgaca 32335  T
Q  175 tgtccatttgg 185  Q
    || || |||||    
T  32336 tgcccgtttgg 32346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 83 - 176
Target Start/End: Original strand, 21064 - 21160
Alignment:
Q  83 tattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctatttcagaaa--tttgaaaatgtattgtgacatg 176  Q
    |||||||||||| ||| |||||| | |||   ||||||||||| ||||||||||||||||||||||| |||||  |||||||||||| |||||||||    
T  21064 tattccgctgcagatttaatgataatttcgaaggatgtttaattaaatagatttttatattctatttaagaaaattttgaaaatgtagtgtgacatg 21160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 11172 - 11245
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctattt 148  Q
    |||| |||||||||||||| ||| |||||||| |||   ||||||||||| |||||||||||||||||||||||    
T  11172 atgagaatattccgctgcagatttaatgatgaattcgaaggatgtttaattaaatagatttttatattctattt 11245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 16069 - 16142
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctattt 148  Q
    |||| ||||||||||| || ||| |||||||| |||   ||||||||||| |||||||||||||||||||||||    
T  16069 atgagaatattccgctccagatttaatgatgaattcgaaggatgtttaattaaatagatttttatattctattt 16142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 25818 - 25745
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctattt 148  Q
    |||| |||||||||||||||||| |||||| | |||   ||||||||||| |||||||||||||||||||||||    
T  25818 atgagaatattccgctgcatatttaatgataaattcgaaggatgtttaattaaatagatttttatattctattt 25745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 41501 - 41428
Alignment:
Q  76 atgataatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatattctattt 148  Q
    |||| |||||||||||||| ||| |||||| | |||   |||| |||||| |||||||||||||||||||||||    
T  41501 atgagaatattccgctgcagatttaatgataaattcgaaggatttttaattaaatagatttttatattctattt 41428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 251442 - 251339
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtcc 179  Q
    |||||||||||||| ||||| |||||| ||    ||||||||| ||||||| |||||||||||||||| ||||| |||||||||||| ||||||||| ||    
T  251442 aatattccgctgcaaattaa-tgatgattttgaaggatgtttattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 251345  T
Q  180 atttgg 185  Q
     |||||    
T  251344 gtttgg 251339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 258028 - 257958
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||| ||| || |||||    
T  258028 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgatatgcccgtttgg 257958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 198102 - 198168
Alignment:
Q  118 tgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||||| |||||||  ||||||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  198102 tgtttattaaatag--ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 198168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 16709 - 16778
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaattt-gaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||  ||||||||||||||| |||||||| ||||||||||||||||||| || |||||    
T  16709 ggatgtttattaaatag--ttttatattctatttaagaaattttgaaaatgtattgtgacatgcccgtttgg 16778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 4114 - 4166
Alignment:
Q  213 ttctagtaggtctacccatctatgaatcttaggacactcataatacaccctct 265  Q
    |||||||||||| |||||||||||||| ||||||||||||||| |||| ||||    
T  4114 ttctagtaggtccacccatctatgaattttaggacactcataacacactctct 4166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1340 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1340
Description:

Target: scaffold1340; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 1923 - 1853
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  1923 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccttttgg 1853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 2202 - 2151
Alignment:
Q  7 tagattattctggttgaggcttttatgccaagatattatttggagttttaaa 58  Q
    |||||| |||||||||||||||||||||||||||||| | | ||||||||||    
T  2202 tagatttttctggttgaggcttttatgccaagatattttatagagttttaaa 2151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 12100 - 12030
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  12100 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 12030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 6882 - 6728
Alignment:
Q  23 aggcttttatgccaagatattatt-tggagttttaaatagttgttgacgtt--tcaatgataatattccgctgcatattaaatgatgagttcactggatg 119  Q
    |||||||||||||||||| | ||| ||||| ||||||||| |||||  |||  |  ||||  ||||||||||||| ||||||||| || ||    |||||    
T  6882 aggcttttatgccaagatttaattatggagatttaaatagatgttgttgttgtttgatgaacatattccgctgcaaattaaatgaagattttgaaggatg 6783  T
Q  120 tttaataaatagatttttatattctatttcaga-aatttgaaaatgtattgtgac 173  Q
    |||| |||||||||||||| ||||||||| ||| | ||||||||| || ||||||    
T  6782 tttattaaatagatttttacattctatttaagacattttgaaaatatagtgtgac 6728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 33663 - 33593
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaattt-gaaaatgtattgtgacatgtccatttgg 185  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||| |||||||||||| |||||    
T  33663 ggatttttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgtccgtttgg 33593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 55445 - 55375
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  55445 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 55375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 33947 - 33877
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| ||||||| |||||||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  33947 ggatgtttattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 33877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 6568 - 6501
Alignment:
Q  116 gatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||||||| |||||||  ||||||||||||||| |||||||| |||| ||| ||||||||| ||||||||    
T  6568 gatgtttattaaatag--ttttatattctatttaagaaattttaaaaagtagtgtgacatgcccatttgg 6501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 1076 - 1149
Alignment:
Q  115 ggatgtttaat-aaatagatttttata--ttctatttcagaaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||||| |||||||||||||||  |||||||| |||||||||||| |||| ||||||||| || |||||    
T  1076 ggatgtttaattaaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatgcccgtttgg 1149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 16896 - 16973
Alignment:
Q  115 ggatgtttaataaa-tagatttttatatt--ctatttcagaaatttgaaaatgtattgtgacatgtccatttggattt 189  Q
    |||||||||||||| |||||||||||||   |||||| |||||||||||| |||| ||||||||| || |||||||||    
T  16896 ggatgtttaataaaatagatttttatatatactatttaagaaatttgaaattgtagtgtgacatgcccgtttggattt 16973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 136906 - 136845
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| |||||||||    
T  136906 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatg 136845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 194632 - 194570
Alignment:
Q  117 atgtttaat-aaatagatttttatat--tctatttcagaaatttgaaaatgtattgtgacatg 176  Q
    ||||||||| ||||||||||||||||  ||||||| |||||||||||| |||| |||||||||    
T  194632 atgtttaattaaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatg 194570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 6550 - 6610
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacat 175  Q
    ||||||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||    
T  6550 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtaatgtgacat 6610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 14654 - 14577
Alignment:
Q  77 tgataatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa 154  Q
    ||||| |||||||||||  | | |||| ||| |||  ||||||||| ||||||||||||||||||||||||| |||||    
T  14654 tgatattattccgctgctgaattaatgttgatttctatggatgtttcataaatagatttttatattctatttaagaaa 14577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 18664 - 18587
Alignment:
Q  77 tgataatattccgctgcatattaaatgatgagttcactggatgtttaataaatagatttttatattctatttcagaaa 154  Q
    ||||| |||||||||||  | | |||| ||| |||  ||||||||| ||||||||||||||||||||||||| |||||    
T  18664 tgatattattccgctgctgaattaatgttgatttctatggatgtttcataaatagatttttatattctatttaagaaa 18587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 27431 - 27501
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaattt-gaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| ||||||| ||| |||||||||||| |||||||| ||||||||  |||||||||||| |||||    
T  27431 ggatgtttattaaatag-tttgtatattctatttaagaaattttgaaaatgttgtgtgacatgtccgtttgg 27501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 26362 - 26427
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaacgg 292  Q
    ||||||||||||||||||||| ||||||  ||||||||| ||  ||| || |||||||||||||||    
T  26362 cccatctatgaatcttaggacgctcatagcacaccctctctaccctcctagtagttctacaaacgg 26427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 1760 - 1812
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||| ||||||||    
T  1760 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccatttgg 1812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 8696 - 8748
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||| ||||||||    
T  8696 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccatttgg 8748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 9921 - 9814
Alignment:
Q  81 aatattccgctgcatattaaatgatgagttcactggatgtttaat-aaatagatttttatat--tctatttcagaaatttgaaaatgtattgtgacatgt 177  Q
    ||||||||||||||  || |||||||| ||    ||||||||||| ||||||||||||||||  ||||||| |||||||||||| | || |||||||| |    
T  9921 aatattccgctgcaagtttaatgatgattttgaaggatgtttaattaaatagatttttatatattctatttaagaaatttgaaattatagtgtgacatat 9822  T
Q  178 ccatttgg 185  Q
    || |||||    
T  9821 ccgtttgg 9814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 1534 - 1483
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||||||||| ||||||||| ||| ||| ||||||||| ||||||||    
T  1534 ttttatattctatttaagaaatttggaaaagtagtgtgacatgcccatttgg 1483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 3761 - 3831
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| ||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  3761 ggatgcttattaaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgg 3831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 950 - 985
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactcata 254  Q
    ||||||| ||||||||||||||||||||||||||||    
T  950 taggtctgcccatctatgaatcttaggacactcata 985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 371 - 308
Alignment:
Q  227 cccatctatgaatcttaggacactcataatacaccctctttatactcttattagttctacaaac 290  Q
    |||||| |||||||||||||||||||||  ||||||||| |   |||||| |||||||||||||    
T  371 cccatcaatgaatcttaggacactcatagcacaccctctctccgctcttagtagttctacaaac 308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 8335 - 8265
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaattt-gaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||||||| ||||||||||| | |||||| ||||||||| ||||||||| || |||||    
T  8335 ggatgtttattaaatagatttt-atattctatttaataaattttgaaaatgtagtgtgacatgcccgtttgg 8265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 14068 - 14131
Alignment:
Q  123 aataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    |||||||||||||||| ||| ||||| ||||| |||||||||||| ||||||||| || |||||    
T  14068 aataaatagatttttaaattttatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 14131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 32165 - 32099
Alignment:
Q  119 gtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  32165 gtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 32099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 5813 - 5875
Alignment:
Q  115 ggatgtttaat-aaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatg 176  Q
    ||||||||||| |||||| |||||||||||||||| ||||| |||||||||||| |||||||||    
T  5813 ggatgtttaattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatg 5875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 82647 - 82713
Alignment:
Q  119 gtttaataaatagatttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  82647 gtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 82713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 17526 - 17599
Alignment:
Q  115 ggatgtttaataaataga--tttttatattctatttcag-aaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| ||||||||  |||||||||||||||| || |||||||||||||||  |||||||| || |||||    
T  17526 ggatgtttattaaatagagttttttatattctatttaagaaaatttgaaaatgtagcgtgacatgcccgtttgg 17599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 40126 - 40160
Alignment:
Q  220 aggtctacccatctatgaatcttaggacactcata 254  Q
    |||||| ||||||||||||||||||||||||||||    
T  40126 aggtcttcccatctatgaatcttaggacactcata 40160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 23368 - 23430
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtcc 179  Q
    ||||||||| |||||||  ||||||||||||||| ||||||||  ||| ||| ||||||||||||    
T  23368 ggatgtttattaaatag--ttttatattctatttaagaaatttcgaaaagtagtgtgacatgtcc 23430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 27565 - 27627
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtcc 179  Q
    ||||||||| |||||||  ||||||||||||||| ||||||||  ||| ||| ||||||||||||    
T  27565 ggatgtttattaaatag--ttttatattctatttaagaaatttcgaaaagtagtgtgacatgtcc 27627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1615 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 1083 - 1135
Alignment:
Q  134 ttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  1083 ttttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgg 1135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 5022 - 4970
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtattgtgacatgtccatttgg 185  Q
    |||||| |||||||| |||||||| ||||||||| ||||||||| ||||||||    
T  5022 ttttattttctatttaagaaattttgaaaatgtagtgtgacatgcccatttgg 4970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 669 - 728
Alignment:
Q  116 gatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatg 176  Q
    |||||||| ||||||| |||||||||||||||| ||||||||  ||| ||| |||||||||    
T  669 gatgtttattaaatag-tttttatattctatttaagaaattttgaaaagtagtgtgacatg 728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 1329 - 1381
Alignment:
Q  134 ttttatattctatttcagaaa-tttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||| || |||||    
T  1329 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 1381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 254
Target Start/End: Original strand, 11680 - 11716
Alignment:
Q  218 gtaggtctacccatctatgaatcttaggacactcata 254  Q
    |||||||  ||||||||||||||||||||||||||||    
T  11680 gtaggtccgcccatctatgaatcttaggacactcata 11716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 254
Target Start/End: Complemental strand, 42778 - 42750
Alignment:
Q  226 acccatctatgaatcttaggacactcata 254  Q
    |||||||||||||||||||||||||||||    
T  42778 acccatctatgaatcttaggacactcata 42750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 73570 - 73631
Alignment:
Q  116 gatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtcc 179  Q
    |||||||| |||||||  ||||||||||||||| ||||||||  ||| ||| ||||||||||||    
T  73570 gatgtttattaaatag--ttttatattctatttaagaaattttgaaaagtagtgtgacatgtcc 73631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 76925 - 76957
Alignment:
Q  219 taggtctacccatctatgaatcttaggacactc 251  Q
    ||||||| |||||||||||||||||||||||||    
T  76925 taggtctgcccatctatgaatcttaggacactc 76957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 172460 - 172526
Alignment:
Q  115 ggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtattgtgacatgtccatttgg 185  Q
    ||||||||| |||||||| ||||||||||||||| ||||   |||||||||| ||||||||| || |||||    
T  172460 ggatgtttattaaataga-ttttatattctatttaagaa---tgaaaatgtagtgtgacatgcccgtttgg 172526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University