View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19083_high_22 (Length: 259)
Name: NF19083_high_22
Description: NF19083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19083_high_22 |
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Alignment Details
Target: chr3 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 27408 - 27161
Alignment:
| Q |
1 |
ctattatcttctaagggtctgtatgaactccttggccatgaagaacaaccctccaatatggaatgggagatatcaaccatgatttgtctggcggagaagg |
100 |
Q |
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| T |
27408 |
ctattatcttctaagggtctgtatgaactccttggccatgaagaacaaccctccaatatggaatgggagatatcagccatgatttgtctggcggagaagg |
27309 |
T |
|
| Q |
101 |
cctctaaaatcatcagcaggaaacctatagaaacctgcaaacagaatttagtcatccaagaaagttgacattatgattgttaagtatctaggaaaaaatg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
27308 |
cctctaaaatcatcagcaggaaacctatagaaacctgcaaacagaatttagtcatccaaaaaagttgacattatgattgttaagtatctaggaaaaaatg |
27209 |
T |
|
| Q |
201 |
aaatgacaattttcatctattttctttattttcatgtctgcactctgt |
248 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
27208 |
aaatgataattttcatctattttctttattttcatgtctgcactctgt |
27161 |
T |
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