View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19083_low_26 (Length: 245)
Name: NF19083_low_26
Description: NF19083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19083_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 13 - 235
Target Start/End: Original strand, 19950715 - 19950921
Alignment:
| Q |
13 |
aatatatagtattaaaaaatgtgttattttcctattgtttagtttgattgtttgaatggtttgatttcgttcccaaatcgatgaattattaactttgatc |
112 |
Q |
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| T |
19950715 |
aatatatagtattaaaaaatgtgttattttcctattgtttagtttgattg-----------------cgttcccaaatcgatgaattattaactttgatc |
19950797 |
T |
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| Q |
113 |
ttgatgttcgtcatttcggtttatgcttcaaatcattgttttcct-nnnnnnnnnttgaaggaaaatcattgtttttcttaattaaaatgatatatattt |
211 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19950798 |
ttgatgttcgtcatttcggtttatgattcaaatcattgttttcctaaaaaaaaaattgaaggaaaatcattgtttttcttaattaaaatgatatatattt |
19950897 |
T |
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| Q |
212 |
tgaaaagcaaatcattgttttttg |
235 |
Q |
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|||||||||||||||||||||||| |
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| T |
19950898 |
tgaaaagcaaatcattgttttttg |
19950921 |
T |
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