View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19083_low_7 (Length: 490)

Name: NF19083_low_7
Description: NF19083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19083_low_7
NF19083_low_7
[»] chr5 (15 HSPs)
chr5 (1-490)||(23422410-23422900)
chr5 (442-490)||(37791147-37791195)
chr5 (303-392)||(30785048-30785137)
chr5 (442-490)||(26913097-26913145)
chr5 (442-490)||(37614411-37614459)
chr5 (442-490)||(40715933-40715981)
chr5 (442-488)||(23218991-23219037)
chr5 (442-488)||(28613014-28613060)
chr5 (442-488)||(32737820-32737866)
chr5 (445-490)||(1538795-1538840)
chr5 (442-490)||(8544973-8545021)
chr5 (442-490)||(14474863-14474911)
chr5 (442-490)||(20688069-20688117)
chr5 (442-490)||(22522785-22522833)
chr5 (442-490)||(37462140-37462188)
[»] chr1 (30 HSPs)
chr1 (41-243)||(20962503-20962705)
chr1 (302-392)||(29124734-29124824)
chr1 (442-490)||(16967178-16967226)
chr1 (444-490)||(16966958-16967004)
chr1 (442-490)||(6000127-6000175)
chr1 (304-392)||(10750589-10750677)
chr1 (442-490)||(16033434-16033482)
chr1 (442-490)||(36228596-36228644)
chr1 (442-490)||(44801540-44801588)
chr1 (442-490)||(52262150-52262198)
chr1 (442-489)||(563231-563278)
chr1 (306-392)||(10303107-10303193)
chr1 (302-348)||(17600604-17600650)
chr1 (442-488)||(17669676-17669722)
chr1 (292-342)||(21089354-21089404)
chr1 (442-488)||(23315777-23315823)
chr1 (442-483)||(48646709-48646750)
chr1 (442-490)||(1408464-1408512)
chr1 (442-490)||(8736464-8736512)
chr1 (442-490)||(10356167-10356215)
chr1 (302-338)||(17888735-17888771)
chr1 (442-490)||(32923847-32923895)
chr1 (442-490)||(33020027-33020075)
chr1 (442-490)||(34595901-34595949)
chr1 (302-346)||(36982344-36982388)
chr1 (442-490)||(41973284-41973332)
chr1 (442-490)||(41974790-41974838)
chr1 (442-490)||(46149028-46149076)
chr1 (442-486)||(49222849-49222893)
chr1 (442-490)||(49431977-49432025)
[»] chr7 (25 HSPs)
chr7 (302-391)||(27484112-27484201)
chr7 (441-484)||(28703826-28703869)
chr7 (302-392)||(7265375-7265465)
chr7 (304-392)||(8839343-8839431)
chr7 (442-490)||(27462420-27462468)
chr7 (330-402)||(40211970-40212042)
chr7 (442-490)||(42753511-42753559)
chr7 (442-490)||(42829218-42829266)
chr7 (442-489)||(28200369-28200416)
chr7 (442-489)||(42219371-42219418)
chr7 (442-489)||(47607894-47607941)
chr7 (304-394)||(2657896-2657986)
chr7 (322-392)||(29059814-29059884)
chr7 (322-392)||(31492112-31492182)
chr7 (449-490)||(8237623-8237664)
chr7 (442-490)||(10244756-10244803)
chr7 (442-490)||(18023708-18023756)
chr7 (442-490)||(20763183-20763231)
chr7 (442-490)||(24483882-24483930)
chr7 (442-490)||(29488749-29488797)
chr7 (332-392)||(30614744-30614804)
chr7 (442-490)||(33232381-33232429)
chr7 (442-490)||(33610909-33610957)
chr7 (442-490)||(34284523-34284571)
chr7 (442-486)||(44434062-44434106)
[»] chr6 (20 HSPs)
chr6 (304-392)||(25084025-25084113)
chr6 (302-392)||(278381-278470)
chr6 (442-490)||(34701176-34701224)
chr6 (442-489)||(5040817-5040864)
chr6 (302-392)||(21910194-21910284)
chr6 (442-490)||(3358420-3358468)
chr6 (442-490)||(4826319-4826367)
chr6 (442-490)||(8569738-8569786)
chr6 (304-392)||(12411139-12411227)
chr6 (442-490)||(15187092-15187140)
chr6 (442-490)||(15473466-15473514)
chr6 (442-490)||(28231409-28231457)
chr6 (442-490)||(29680617-29680665)
chr6 (442-490)||(247688-247736)
chr6 (442-490)||(3808102-3808150)
chr6 (442-490)||(12184537-12184585)
chr6 (442-490)||(14049868-14049916)
chr6 (442-490)||(17113444-17113492)
chr6 (442-490)||(26356065-26356113)
chr6 (442-490)||(29069512-29069560)
[»] chr4 (32 HSPs)
chr4 (302-392)||(29597462-29597552)
chr4 (442-490)||(56551576-56551624)
chr4 (321-392)||(38844230-38844301)
chr4 (304-392)||(7096087-7096175)
chr4 (442-490)||(11198357-11198405)
chr4 (442-490)||(14577491-14577539)
chr4 (442-490)||(19997348-19997396)
chr4 (442-490)||(49041965-49042013)
chr4 (442-488)||(2888905-2888951)
chr4 (322-392)||(31307128-31307198)
chr4 (302-392)||(45994511-45994601)
chr4 (442-486)||(836219-836263)
chr4 (442-490)||(3936656-3936704)
chr4 (442-490)||(7230309-7230357)
chr4 (442-490)||(10261753-10261801)
chr4 (442-490)||(11949747-11949795)
chr4 (442-490)||(13434885-13434933)
chr4 (442-490)||(17423161-17423209)
chr4 (442-490)||(19908721-19908769)
chr4 (442-490)||(21562654-21562702)
chr4 (304-392)||(22189450-22189538)
chr4 (442-490)||(26926694-26926742)
chr4 (442-490)||(32006529-32006577)
chr4 (442-490)||(37930831-37930879)
chr4 (442-490)||(38374986-38375034)
chr4 (304-392)||(38766080-38766168)
chr4 (442-490)||(40070952-40071000)
chr4 (442-490)||(42845054-42845102)
chr4 (442-490)||(43034326-43034374)
chr4 (442-490)||(43330175-43330223)
chr4 (444-488)||(49491219-49491263)
chr4 (442-490)||(51450241-51450289)
[»] chr3 (21 HSPs)
chr3 (304-394)||(25224690-25224780)
chr3 (442-490)||(20296323-20296371)
chr3 (304-392)||(48204373-48204461)
chr3 (442-490)||(8075814-8075862)
chr3 (442-490)||(8238593-8238641)
chr3 (442-490)||(12699989-12700037)
chr3 (442-490)||(48022298-48022346)
chr3 (442-490)||(48849747-48849795)
chr3 (441-490)||(22722431-22722480)
chr3 (442-490)||(39100067-39100116)
chr3 (442-490)||(334831-334879)
chr3 (442-490)||(916468-916516)
chr3 (442-490)||(8136616-8136664)
chr3 (442-490)||(24428457-24428505)
chr3 (442-490)||(25441484-25441532)
chr3 (442-490)||(30050412-30050460)
chr3 (442-490)||(38130943-38130991)
chr3 (442-490)||(42074132-42074180)
chr3 (442-490)||(44075140-44075188)
chr3 (442-490)||(45431977-45432025)
chr3 (442-490)||(45885461-45885509)
[»] chr8 (25 HSPs)
chr8 (442-490)||(12700981-12701029)
chr8 (304-390)||(19715790-19715876)
chr8 (442-490)||(7553708-7553756)
chr8 (442-490)||(9241044-9241092)
chr8 (442-490)||(33743604-33743652)
chr8 (442-490)||(33996098-33996146)
chr8 (321-392)||(15682937-15683008)
chr8 (322-392)||(2743942-2744012)
chr8 (442-488)||(27134404-27134450)
chr8 (442-490)||(444442-444490)
chr8 (442-490)||(2489709-2489757)
chr8 (442-490)||(6038259-6038307)
chr8 (442-490)||(8999875-8999923)
chr8 (442-490)||(9192211-9192259)
chr8 (442-490)||(11709015-11709063)
chr8 (442-490)||(12748930-12748978)
chr8 (304-392)||(12958147-12958235)
chr8 (442-490)||(13449781-13449829)
chr8 (442-490)||(20665347-20665395)
chr8 (442-490)||(27718878-27718926)
chr8 (442-490)||(28436531-28436579)
chr8 (442-490)||(30550710-30550758)
chr8 (442-490)||(35700379-35700427)
chr8 (442-490)||(37141386-37141434)
chr8 (442-490)||(44215459-44215507)
[»] chr2 (28 HSPs)
chr2 (330-392)||(42745178-42745240)
chr2 (442-490)||(26999139-26999187)
chr2 (442-490)||(28439553-28439601)
chr2 (442-489)||(22061317-22061364)
chr2 (304-391)||(44752257-44752344)
chr2 (442-488)||(690819-690865)
chr2 (442-488)||(9429246-9429292)
chr2 (442-488)||(35065612-35065658)
chr2 (433-490)||(20663105-20663162)
chr2 (442-490)||(3708722-3708770)
chr2 (304-392)||(5394388-5394475)
chr2 (442-490)||(10735815-10735863)
chr2 (442-490)||(11868646-11868694)
chr2 (304-392)||(12133292-12133380)
chr2 (442-490)||(14735877-14735925)
chr2 (442-490)||(15447698-15447746)
chr2 (304-392)||(17981489-17981577)
chr2 (442-490)||(20200734-20200782)
chr2 (442-490)||(23718964-23719012)
chr2 (442-490)||(24106636-24106684)
chr2 (442-490)||(24579652-24579700)
chr2 (442-490)||(24581001-24581049)
chr2 (442-490)||(25186226-25186274)
chr2 (442-490)||(29544656-29544704)
chr2 (442-490)||(31815871-31815919)
chr2 (442-490)||(33064015-33064063)
chr2 (442-490)||(35360039-35360087)
chr2 (442-490)||(36264463-36264511)
[»] scaffold0038 (1 HSPs)
scaffold0038 (442-490)||(31906-31954)
[»] scaffold0005 (1 HSPs)
scaffold0005 (442-490)||(239836-239884)
[»] scaffold0182 (1 HSPs)
scaffold0182 (322-392)||(26340-26410)
[»] scaffold0350 (1 HSPs)
scaffold0350 (442-490)||(1277-1325)


Alignment Details
Target: chr5 (Bit Score: 451; Significance: 0; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 451; E-Value: 0
Query Start/End: Original strand, 1 - 490
Target Start/End: Original strand, 23422410 - 23422900
Alignment:
Q  1 agtaatgctgagaaaaataccagggacgctaaggagcgacacagttcgacgactgataagcgaaactattacccgcctccaaacagagactaatgtacct 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23422410 agtaatgctgagaaaaataccagggacgctaaggagcgacacggttcgacgactgataagcgaaactattacccgcctccaaacagagaccaatgtacct 23422509  T
Q  101 tcaaaagacaagaaaggcgaatatacagcgttgacgaatttaccttgctaaacacaaggccataaagaatatataaggaggtctaccaaactaagatgat 200  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23422510 tcaaaagacaagaaaggcgaatatacaacgttgacgaatttaccttgctaaacacaaggtcataaagaatatataaggaggtctaccaaactaagatgat 23422609  T
Q  201 tcccaaacctccaaaacctcgtggcgaccgcatgggacatgatatggaggctttgaagccaatatacaccaggttagattaatgaaatctcattcaataa 300  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23422610 tcccaaacctccagaacctcgtggcgaccgcatgggacatgatatggaggctttgaagccaatatacaccaggttagattaatgaaatctcattcaataa 23422709  T
Q  301 tgtttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctt-aagatgag 399  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23422710 tgtttagatgagataacgcgagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactcttaaagatgag 23422809  T
Q  400 ttttacacccttttagatcccacaaggctcaagtttacttggttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23422810 ttttacacccttttagatcccacaaggctcaagtttacttggttttttgtggtggccggagtttgaacatcgaactttgcatatattatgc 23422900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 37791147 - 37791195
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||    
T  37791147 ttttttgtggtggccggagtttgaacctcgaaccttgcatatattatgc 37791195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 392
Target Start/End: Complemental strand, 30785137 - 30785048
Alignment:
Q  303 tttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||||||||||||   | ||||| ||||||||||| ||| |||||| | || |||| || ||||| |||||||||| |||||||||||||    
T  30785137 tttagatgagatggaacgagtctcttctagcttaatcaatgtcttgggttcgaatccagctttggacatgcagcaacgttaaaactctta 30785048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 26913097 - 26913145
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||||||||||||||| | | || |||||||||||||||    
T  26913097 ttttttgtggtggccggagtttgaaccttgaacgttgcatatattatgc 26913145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 37614411 - 37614459
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||||| ||||||||| ||| || |||||||||||||||    
T  37614411 ttttttgtggtggccgaagtttgaacctcgaaccttgcatatattatgc 37614459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 40715933 - 40715981
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||||    
T  40715933 ttttttgtggtggccggggtttgaaccccggaccttgcatatattatgc 40715981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 442 - 488
Target Start/End: Complemental strand, 23219037 - 23218991
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattat 488  Q
    |||||||||||||||| ||||||||| |||||| |||||||| ||||    
T  23219037 ttttttgtggtggccgaagtttgaacctcggaccttgcatattttat 23218991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 442 - 488
Target Start/End: Complemental strand, 28613060 - 28613014
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattat 488  Q
    ||||||||||||||||||||||||||  | ||| |||||||||||||    
T  28613060 ttttttgtggtggccggagtttgaaccccagacattgcatatattat 28613014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 442 - 488
Target Start/End: Original strand, 32737820 - 32737866
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattat 488  Q
    ||||||||||||||||||||| ||||  | |||||||||||||||||    
T  32737820 ttttttgtggtggccggagttcgaaccccagactttgcatatattat 32737866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Original strand, 1538795 - 1538840
Alignment:
Q  445 tttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||| ||| |||||||| |||||| |||||||||||||||    
T  1538795 tttgtggtggtcggcgtttgaacctcggaccttgcatatattatgc 1538840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 8544973 - 8545021
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||||||| ||||  ||||| |||||||||||||||    
T  8544973 ttttttgtggtggtcggagttcgaactccggaccttgcatatattatgc 8545021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 14474911 - 14474863
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||   |||| |||||||||||||||    
T  14474911 ttttttgtggtggccggggtttgaaccctggaccttgcatatattatgc 14474863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 20688117 - 20688069
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||| ||||||||| ||||||||||  ||||| |||||||||||||||    
T  20688117 tttttggtggtggccagagtttgaactccggaccttgcatatattatgc 20688069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 22522785 - 22522833
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||| ||||||||||| ||||||||  ||||| |||||||||||||||    
T  22522785 tttttggtggtggccggggtttgaaccccggaccttgcatatattatgc 22522833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 37462188 - 37462140
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  37462188 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 37462140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 41 - 243
Target Start/End: Complemental strand, 20962705 - 20962503
Alignment:
Q  41 acagttcgacgactgataagcgaaactattacccgcctccaaacagagactaatgtaccttcaaaagacaagaaaggcgaatatacagcgttgacgaatt 140  Q
    |||||| ||| || |||| ||| ||||| |||||||||||||| |||||   | | ||||| |||||||| ||||||||||| ||||| || ||||| ||    
T  20962705 acagtttgacaacagataggcgcaactactacccgcctccaaatagagatcgaggcacctttaaaagacaggaaaggcgaatttacagtgtagacgactt 20962606  T
Q  141 taccttgctaaacacaaggccataaagaatatataaggaggtctaccaaactaagatgattcccaaacctccaaaacctcgtggcgaccgcatgggacat 240  Q
    ||||  | |||||||||| ||  ||||||| || |||||||| || ||||| ||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  20962605 taccccgttaaacacaagaccggaaagaatctacaaggaggtatatcaaaccaagatgattcccaaaccgccagaacctcgtggcgatcgcatgggacat 20962506  T
Q  241 gat 243  Q
    |||    
T  20962505 gat 20962503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 392
Target Start/End: Original strand, 29124734 - 29124824
Alignment:
Q  302 gtttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||||||||||||||  | ||||| |||||||||||||| |||| |||| || |||| ||  ||||||||||||||  |||||||||||||    
T  29124734 gtttagatgagatgaaacgagtctcttctagcttaaccagggtcatgagttcgaatccagcattgggcatgcagcagcgttaaaactctta 29124824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 16967178 - 16967226
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||    
T  16967178 ttttttgtggtggccggagtttgaacctcgaaccttgcatatattatgc 16967226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 490
Target Start/End: Original strand, 16966958 - 16967004
Alignment:
Q  444 ttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||||||||||||| ||| || |||||||||||||||    
T  16966958 ttttgtggtggccggagtttgaacctcgaaccttgcatatattatgc 16967004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 6000127 - 6000175
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||| |||| |||||||| |||||| |||||||||||||||    
T  6000127 ttttttgtggtgtccggggtttgaacctcggaccttgcatatattatgc 6000175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 10750589 - 10750677
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||||||||||||  || ||||||||||  ||||||||||||||| | || |||||| | |||||||| || ||  |||||||||||||    
T  10750589 ttagatgagatgaaacatgtcttttctaatttaaccaaggtcttgggttcgaatctaatcttgggcatacatcagcgttaaaactctta 10750677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 16033434 - 16033482
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||||||||||||  | ||| |||||||||||||||    
T  16033434 ttttttgtggtggccggagtttgaaccccagaccttgcatatattatgc 16033482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 36228644 - 36228596
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||||||||||||||| ||| || |||||||| ||||||    
T  36228644 ttttttgtggtggccggagtttgaacttcgcaccttgcatattttatgc 36228596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 44801588 - 44801540
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||| | ||||||||| |||||||||||||| ||||||    
T  44801588 ttttttgtggtggccagggtttgaacaccggactttgcatattttatgc 44801540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 52262150 - 52262198
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| |||||||||||| ||| ||||||||||| ||||||    
T  52262150 ttttttgtggtggtcggagtttgaacctcgaactttgcatattttatgc 52262198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 489
Target Start/End: Complemental strand, 563278 - 563231
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatg 489  Q
    ||||||||| ||||||||||||||||  ||||| ||||||||||||||    
T  563278 ttttttgtgatggccggagtttgaactccggaccttgcatatattatg 563231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 392
Target Start/End: Original strand, 10303107 - 10303193
Alignment:
Q  306 agatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||||||||| | ||| ||| |||||||||||| || |||||||| || |||| || ||| | |||||| ||| |||||||||||||    
T  10303107 agatgagatggcacaaatctattctagcttaactaaagtcttgagttcgaatccagctttagacatgcaacaacgttaaaactctta 10303193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 17600650 - 17600604
Alignment:
Q  302 gtttagatgagatgacgcaagtcttttctagcttaaccaaggtcttg 348  Q
    |||||||||||||||| |  |||| ||||||||||||||||||||||    
T  17600650 gtttagatgagatgacacgggtctcttctagcttaaccaaggtcttg 17600604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 442 - 488
Target Start/End: Complemental strand, 17669722 - 17669676
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattat 488  Q
    ||||||||||||||||||||||||||  || || |||||||||||||    
T  17669722 ttttttgtggtggccggagtttgaaccccgaaccttgcatatattat 17669676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 21089404 - 21089354
Alignment:
Q  292 attcaataatgtttagatgagatgacgcaagtcttttctagcttaaccaag 342  Q
    |||||| || |||||||||||||||| ||||||| |||||| |||||||||    
T  21089404 attcaagaacgtttagatgagatgacacaagtctcttctagtttaaccaag 21089354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 442 - 488
Target Start/End: Complemental strand, 23315823 - 23315777
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattat 488  Q
    ||||||||||||||||||||||||||  | |||||||||||| ||||    
T  23315823 ttttttgtggtggccggagtttgaaccacagactttgcatatgttat 23315777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 483
Target Start/End: Original strand, 48646709 - 48646750
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatat 483  Q
    ||||||||||||||||||||||||||  ||||| ||||||||    
T  48646709 ttttttgtggtggccggagtttgaaccccggaccttgcatat 48646750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 1408512 - 1408464
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||| ||||| || |||| ||| ||||||||||||||||||    
T  1408512 ttttttgtggtgtccggaattcgaacttcgaactttgcatatattatgc 1408464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 8736512 - 8736464
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  8736512 ttttttgtggtggccggggtttgaaccccggaccttgcatattttatgc 8736464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 10356167 - 10356215
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||||||| ||||  |||||  ||||||||||||||    
T  10356167 ttttttgtggtggccggagttcgaaccccggaccgtgcatatattatgc 10356215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 338
Target Start/End: Original strand, 17888735 - 17888771
Alignment:
Q  302 gtttagatgagatgacgcaagtcttttctagcttaac 338  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  17888735 gtttagatgagatgacgcatgtctcttctagcttaac 17888771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 32923895 - 32923847
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| |||||||||||| || ||| || ||||||||||||    
T  32923895 ttttttgtggtggtcggagtttgaacttcagacctttcatatattatgc 32923847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 33020027 - 33020075
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||| || |||||||| || ||| |||||||||||||||    
T  33020027 ttttttgtggtggctggggtttgaacctcagaccttgcatatattatgc 33020075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 34595949 - 34595901
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||  ||||||||  ||||| |||||||||||||||    
T  34595949 ttttttgtggtggccgaggtttgaaccccggaccttgcatatattatgc 34595901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 346
Target Start/End: Original strand, 36982344 - 36982388
Alignment:
Q  302 gtttagatgagatgacgcaagtcttttctagcttaaccaaggtct 346  Q
    |||||||||||||||| || |||| |||||| |||||||||||||    
T  36982344 gtttagatgagatgacacaggtctcttctagtttaaccaaggtct 36982388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 41973332 - 41973284
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||| ||||  ||||| |||||||||||||||    
T  41973332 ttttttgtggtggccggggttcgaaccccggaccttgcatatattatgc 41973284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 41974838 - 41974790
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| |||||||| ||  || |||||||||||||||    
T  41974838 ttttttgtggtggccggggtttgaacctcaaaccttgcatatattatgc 41974790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 46149028 - 46149076
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| |||||||| | |||| ||||||||| |||||    
T  46149028 ttttttgtggtggccggggtttgaaccttggaccttgcatataatatgc 46149076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 486
Target Start/End: Complemental strand, 49222893 - 49222849
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatatt 486  Q
    |||||||||||||| |||||||||||  ||||| |||||||||||    
T  49222893 ttttttgtggtggctggagtttgaaccccggaccttgcatatatt 49222849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 49431977 - 49432025
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| || ||||||||||||    
T  49431977 ttttttgtggtggccggggtttgaaccccggaccttacatatattatgc 49432025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 302 - 391
Target Start/End: Complemental strand, 27484201 - 27484112
Alignment:
Q  302 gtttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctt 391  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||| | ||||| ||   |||||||||||||  ||||||||||||    
T  27484201 gtttagatgagatgacacaagtctcttctagcttaaccaaggtcctgagtttaaatccagccatgggcatgcagcagcgttaaaactctt 27484112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 441 - 484
Target Start/End: Complemental strand, 28703869 - 28703826
Alignment:
Q  441 gttttttgtggtggccggagtttgaacatcggactttgcatata 484  Q
    ||||||||||||||||||||||||||| |||||| |||||||||    
T  28703869 gttttttgtggtggccggagtttgaacctcggaccttgcatata 28703826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 392
Target Start/End: Complemental strand, 7265465 - 7265375
Alignment:
Q  302 gtttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    ||||| |||||||||| |  |||| ||||||||||||||| || ||| | ||  ||||||| ||||||||||||| | |||||||||||||    
T  7265465 gtttatatgagatgacacgggtctcttctagcttaaccaaagttttgggttcggatctagtcttgggcatgcagcgatgttaaaactctta 7265375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 8839431 - 8839343
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||||||||||||  |  |||| ||||||||||||||||||| || | || |||| ||  ||||||||||||||  |||||||||||||    
T  8839431 ttagatgagatgaaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagcgttaaaactctta 8839343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 27462420 - 27462468
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||||    
T  27462420 ttttttgtggtggccggggtttgaaccccggaccttgcatatattatgc 27462468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 40211970 - 40212042
Alignment:
Q  330 tagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactcttaagatgagttt 402  Q
    |||||||| ||||||| || | ||||||| ||| ||||||||||| ||| ||||||||||||| || ||||||    
T  40211970 tagcttaatcaaggtcatgggttcaaatccagtcttgggcatgcaacaacgttaaaactcttaggaagagttt 40212042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 42753511 - 42753559
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||| |||||||||||  ||||| |||||||||||||||    
T  42753511 ttttttgtggtggctggagtttgaaccccggaccttgcatatattatgc 42753559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 42829218 - 42829266
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||||||    
T  42829218 ttttttgtggtggccggagtttgaaccccggagcttgcatatattatgc 42829266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 489
Target Start/End: Original strand, 28200369 - 28200416
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatg 489  Q
    ||||||||||||| |||||||||||| ||| | |||||||||||||||    
T  28200369 ttttttgtggtggtcggagtttgaacctcgaattttgcatatattatg 28200416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 489
Target Start/End: Original strand, 42219371 - 42219418
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatg 489  Q
    ||||||||||||||||  |||||||| |||||| ||||||||||||||    
T  42219371 ttttttgtggtggccgatgtttgaacctcggaccttgcatatattatg 42219418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 489
Target Start/End: Original strand, 47607894 - 47607941
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatg 489  Q
    ||||||||||||||||||||||||||   |||| ||||||||||||||    
T  47607894 ttttttgtggtggccggagtttgaaccctggaccttgcatatattatg 47607941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 2657986 - 2657896
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactcttaag 394  Q
    ||||||||||||   | ||||| ||||| ||||| ||||| | |||| ||||||  ||  ||||||||||||||| |||||||||||||||    
T  2657986 ttagatgagatggaacgagtctcttctaacttaatcaaggccctgagttcaaatacagccttgggcatgcagcaacgttaaaactcttaag 2657896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 29059814 - 29059884
Alignment:
Q  322 gtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||| ||||||||||||||||||| || | || |||| ||  ||||||||||||||  |||||||||||||    
T  29059814 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctta 29059884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 31492112 - 31492182
Alignment:
Q  322 gtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||| ||||||||||||||||||| || | || |||| ||  ||||||||||||||  |||||||||||||    
T  31492112 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctta 31492182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 490
Target Start/End: Original strand, 8237623 - 8237664
Alignment:
Q  449 tggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||| |||||||| |||||||||| |||||||||||    
T  8237623 tggtggccggggtttgaacctcggactttgtatatattatgc 8237664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 10244803 - 10244756
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||||    
T  10244803 ttttttgtggtggccgg-gtttgaaccccggaccttgcatatattatgc 10244756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 18023756 - 18023708
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||||||||||||   |||| |||||||||||||||    
T  18023756 ttttttgtggtggtcggagtttgaaccctggaccttgcatatattatgc 18023708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 20763231 - 20763183
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  20763231 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 20763183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 24483882 - 24483930
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||  |||||||||||  || ||||||||||||||||||    
T  24483882 ttttttgtggtggttggagtttgaaccccgaactttgcatatattatgc 24483930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 29488797 - 29488749
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  29488797 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 29488749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 30614804 - 30614744
Alignment:
Q  332 gcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||||||||||||||| || |  ||| |||||||||||||||| ||  |||||||||||||    
T  30614804 gcttaaccaaggtcttaagtttgaatttagttttgggcatgcatcagcgttaaaactctta 30614744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 33232381 - 33232429
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  33232381 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 33232429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 33610909 - 33610957
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||| ||||  ||||| |||||||||||||||    
T  33610909 ttttttgtggtggccggtgttcgaactccggaccttgcatatattatgc 33610957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 34284523 - 34284571
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  34284523 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 34284571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 486
Target Start/End: Complemental strand, 44434106 - 44434062
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatatt 486  Q
    ||||||||||||| |||  ||||||| ||||||||||||||||||    
T  44434106 ttttttgtggtggtcgggatttgaacctcggactttgcatatatt 44434062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 25084025 - 25084113
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||||||||||||| ||||||| ||||||||||| ||| |||||||| || |||  ||| |||| |||||||||| |||||||||||||    
T  25084025 ttagatgagatgacacaagtctcttctagcttaatcaaagtcttgagttcgaattcagtcttggacatgcagcaatgttaaaactctta 25084113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 392
Target Start/End: Original strand, 278381 - 278470
Alignment:
Q  302 gtttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||||||||||||||| | ||||| |||||||||||| ||||||||||| |  |||| || |||||||||||| || | ||||||||||||    
T  278381 gtttagatgagatgacacgagtctcttctagcttaactaaggtcttgagtttgaatccagctttgggcatgcaacaca-ttaaaactctta 278470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 34701224 - 34701176
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||    
T  34701224 ttttttgtggtggccggagtttgaacctcagaccttgcatatattatgc 34701176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 442 - 489
Target Start/End: Original strand, 5040817 - 5040864
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatg 489  Q
    |||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  5040817 ttttttatggtggccggagtttgaacaccggaccttgcatatattatg 5040864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 392
Target Start/End: Original strand, 21910194 - 21910284
Alignment:
Q  302 gtttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||||||||||||||  ||||||| |||||||||||||||| || || | || |||| ||  ||||||||||| ||  |||||||||||||    
T  21910194 gtttagatgagatgaaacaagtctcttctagcttaaccaagatcctgggttcgaatccagccttgggcatgcaacatcgttaaaactctta 21910284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 3358468 - 3358420
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||| |  |||||||| ||||||||||||||||||||||    
T  3358468 ttttttgtggtggctgtggtttgaacctcggactttgcatatattatgc 3358420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 4826367 - 4826319
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||||||||||||||| ||| || || ||||||||||||    
T  4826367 ttttttgtggtggccggagtttgaacctcgaaccttacatatattatgc 4826319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 8569786 - 8569738
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||||    
T  8569786 ttttttgtggtggccggggtttgaaccccggaccttgcatatattatgc 8569738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 12411139 - 12411227
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    ||||||||||||   || |||| ||||| ||||||||||||| |||| || |||| ||  ||||||||||||||  |||||||||||||    
T  12411139 ttagatgagatggaacaggtctcttctaacttaaccaaggtcctgagttcgaatccagccttgggcatgcagcagcgttaaaactctta 12411227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 15187140 - 15187092
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||| |||||||| |||||| |||||||||||||||    
T  15187140 ttttttgtggtggtcggggtttgaacctcggaccttgcatatattatgc 15187092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 15473466 - 15473514
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||| |||||||| |||||| |||||||||||||||    
T  15473466 ttttttgtggtggtcggggtttgaacctcggaccttgcatatattatgc 15473514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 28231409 - 28231457
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||||||||| |||||  ||||| |||||||||||||||    
T  28231409 ttttttgtggtggccggagtgtgaaccccggaccttgcatatattatgc 28231457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 29680665 - 29680617
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||||||||||||| || || |||||||||||||||    
T  29680665 ttttttgtggtggtcggagtttgaacaccgaaccttgcatatattatgc 29680617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 247736 - 247688
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  247736 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 247688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 3808102 - 3808150
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||| || |||||||  |||||| |||||||||||||||    
T  3808102 ttttttgtggtggctggggtttgaatctcggaccttgcatatattatgc 3808150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 12184585 - 12184537
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||||||  |||||||  ||||| |||||||||||||||    
T  12184585 ttttttgtggtggccgggatttgaaccacggaccttgcatatattatgc 12184537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 14049868 - 14049916
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||| |||||||||||| ||||||| || ||| |||||||||||||||    
T  14049868 tttttggtggtggccggaatttgaacctcagaccttgcatatattatgc 14049916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 17113444 - 17113492
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| || ||||||||| || ||| |||||||||||||||    
T  17113444 ttttttgtggtggtcgaagtttgaacctcagaccttgcatatattatgc 17113492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 26356065 - 26356113
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||| |||||||||||||||||  || || |||||||||||||||    
T  26356065 ttttttgtagtggccggagtttgaaccccgaaccttgcatatattatgc 26356113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 29069560 - 29069512
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||| |||||||| |||||||| || |||||| ||||||||||||    
T  29069560 ttttttgtagtggccggggtttgaacctcagacttttcatatattatgc 29069512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 392
Target Start/End: Original strand, 29597462 - 29597552
Alignment:
Q  302 gtttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||||||||||||||| | ||| |||| || |||||| ||||||||||| ||||||  ||| ||||||||||| ||| |||||||||||||    
T  29597462 gtttagatgagatgacacgagttttttttaacttaacaaaggtcttgagttcaaattcagtcttgggcatgcaacaacgttaaaactctta 29597552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 56551576 - 56551624
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||||    
T  56551576 ttttttgtggtggccggggtttgaacctcggaccttgcatatattatgc 56551624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 38844301 - 38844230
Alignment:
Q  321 agtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    ||||| ||||||||||||||||||| |||| || |||| || |||||||||||| ||  |||||||||||||    
T  38844301 agtctcttctagcttaaccaaggtcatgagttcgaatccagctttgggcatgcaacagcgttaaaactctta 38844230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 7096087 - 7096175
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||||||||||||| || || | |||||||||||||||||| ||| | |  |||  ||| ||| | |||||||||||||||||||||||    
T  7096087 ttagatgagatgacacaggtttcttctagcttaaccaaggttttgggtttgaatacagtcttgagtatgcagcaaagttaaaactctta 7096175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 11198405 - 11198357
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||||    
T  11198405 ttttttgtggtggccggggtttgaaccccggaccttgcatatattatgc 11198357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 14577491 - 14577539
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||| ||||||| ||||||||  |||||||||||||||||||||    
T  14577491 ttttttgtgatggccggggtttgaactccggactttgcatatattatgc 14577539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 19997348 - 19997396
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||||||||||||  || ||||||||||||||||||    
T  19997348 ttttttgtggtggtcggagtttgaaccccgaactttgcatatattatgc 19997396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 49041965 - 49042013
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||||    
T  49041965 ttttttgtggtggccggggtttgaaccccggaccttgcatatattatgc 49042013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 442 - 488
Target Start/End: Complemental strand, 2888951 - 2888905
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattat 488  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||    
T  2888951 ttttttgtggtggccggggtttgaaccgcggaccttgcatatattat 2888905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 392
Target Start/End: Complemental strand, 31307198 - 31307128
Alignment:
Q  322 gtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||| ||||||||||||||||||| || | || |||| ||  ||||||||||||||  |||||||||||||    
T  31307198 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctta 31307128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 392
Target Start/End: Original strand, 45994511 - 45994601
Alignment:
Q  302 gtttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    ||||||||||||||   || |||| ||||||||||||||||||| ||   || |||| ||  ||||||||||| ||| |||||||||||||    
T  45994511 gtttagatgagatggaacaggtctcttctagcttaaccaaggtcctggattcgaatccagccttgggcatgcaacaacgttaaaactctta 45994601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 486
Target Start/End: Original strand, 836219 - 836263
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatatt 486  Q
    ||||| ||||||| |||||||||||| |||||| |||||||||||    
T  836219 tttttggtggtggtcggagtttgaacctcggaccttgcatatatt 836263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 3936704 - 3936656
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||| ||||  ||||| |||||||||||||||    
T  3936704 ttttttgtggtggccggggttcgaaccccggaccttgcatatattatgc 3936656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 7230357 - 7230309
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||  ||||||||  ||||| |||||||||||||||    
T  7230357 ttttttgtggtggccgaggtttgaaccccggaccttgcatatattatgc 7230309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 10261753 - 10261801
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  10261753 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 10261801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 11949747 - 11949795
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||| ||||||||  ||||| |||||||||||||||    
T  11949747 ttttttgtggtggtcggggtttgaaccccggaccttgcatatattatgc 11949795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 13434885 - 13434933
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||| ||||||||| ||| |||||| |||||||| ||||||    
T  13434885 ttttttgtggtgaccggagttttaacttcggaccttgcatattttatgc 13434933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 17423161 - 17423209
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||| |||||||| |||||||||||  ||||| |||||||||||||||    
T  17423161 tttttcgtggtggctggagtttgaaccccggaccttgcatatattatgc 17423209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 19908769 - 19908721
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||| ||| |||| |||||| |||||||||||||||    
T  19908769 ttttttgtggtggtcggggttcgaacctcggaccttgcatatattatgc 19908721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 21562702 - 21562654
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  21562702 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 21562654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 22189538 - 22189450
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    ||||||||||||||   ||||| |||||||||||||||||||  ||| || |||| |   ||| |||||||||||  ||||||||||||    
T  22189538 ttagatgagatgacatgagtctcttctagcttaaccaaggtccagagttcgaatccaaccttgtgcatgcagcaacattaaaactctta 22189450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 26926694 - 26926742
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  26926694 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 26926742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 32006577 - 32006529
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||| |||||||||||||||||||  || ||||| ||||||||||||    
T  32006577 ttttttatggtggccggagtttgaaccccgaactttacatatattatgc 32006529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 37930831 - 37930879
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||| |||||||| || ||| |||||||||||||||    
T  37930831 ttttttgtggtggtcggggtttgaacctcagaccttgcatatattatgc 37930879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 38375034 - 38374986
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  | ||| |||||||||||||||    
T  38375034 ttttttgtggtggccggggtttgaactccagaccttgcatatattatgc 38374986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 38766080 - 38766168
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    ||||||||||||   | ||||| ||||||||||||||||||| || | |  |||| ||  ||||||||||||||  |||||||||||||    
T  38766080 ttagatgagatggaacgagtctcttctagcttaaccaaggtcctgggtttgaatccagccttgggcatgcagcagcgttaaaactctta 38766168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 40070952 - 40071000
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||| ||| ||| |||||||| |||||| |||||||||||||||    
T  40070952 ttttttgtgatggtcggggtttgaacttcggaccttgcatatattatgc 40071000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 42845102 - 42845054
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| |||||||| |||  ||||| |||||||||||||||    
T  42845102 ttttttgtggtggtcggagttttaaccccggaccttgcatatattatgc 42845054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 43034326 - 43034374
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||| ||||||||||| |||||||| || ||| |||||||||||||||    
T  43034326 tttttggtggtggccggggtttgaacctcagaccttgcatatattatgc 43034374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 43330223 - 43330175
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  43330223 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 43330175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 488
Target Start/End: Complemental strand, 49491263 - 49491219
Alignment:
Q  444 ttttgtggtggccggagtttgaacatcggactttgcatatattat 488  Q
    ||||||||||| ||||||||||||  |||||||| ||||||||||    
T  49491263 ttttgtggtggtcggagtttgaactccggactttacatatattat 49491219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 51450289 - 51450241
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  51450289 ttttttgtggtggccggggtttgaactccggaccttgcatatcttatgc 51450241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 394
Target Start/End: Original strand, 25224690 - 25224780
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactcttaag 394  Q
    |||||||||||||  |  |||| ||||||||||||||||||| || | || |||| ||||||||| ||||||||  |||||||||||||||    
T  25224690 ttagatgagatgaaacgggtctcttctagcttaaccaaggtcctgggttcgaatcaagttttgggaatgcagcagcgttaaaactcttaag 25224780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 20296371 - 20296323
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  20296371 ttttttgtggtcgtcggggtttgaacatcggactttgcatatattatgc 20296323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 48204461 - 48204373
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    ||||||||||||   | ||||| |||||||||||||||||||||| | || |||| ||  ||||||||||||||| |||||||| ||||    
T  48204461 ttagatgagatggaacgagtctcttctagcttaaccaaggtcttgggttcgaatccagccttgggcatgcagcaacgttaaaaccctta 48204373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 8075862 - 8075814
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| |||||||| || ||| |||||||||||||||    
T  8075862 ttttttgtggtggccggggtttgaacctcagaccttgcatatattatgc 8075814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 8238641 - 8238593
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||||||||||||  | ||| |||||||||||||||    
T  8238641 ttttttgtggtggccggagtttgaaccccagaccttgcatatattatgc 8238593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 12699989 - 12700037
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||||||||||||  |||||||| ||||| ||||||    
T  12699989 ttttttgtggtggccggagtttgaaccccggactttacatattttatgc 12700037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 48022298 - 48022346
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||||||||||||  || ||||||||||||||||||    
T  48022298 ttttttgtggtggtcggagtttgaaccccgaactttgcatatattatgc 48022346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 48849747 - 48849795
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||||||||||    
T  48849747 ttttttgtggtggccggggtttgaaccccggaccttgcatatattatgc 48849795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 490
Target Start/End: Complemental strand, 22722480 - 22722431
Alignment:
Q  441 gttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||| ||| |||||||| |||||| |||||||| ||||||    
T  22722480 gttttttgtggtggtcggggtttgaacctcggaccttgcatattttatgc 22722431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 39100067 - 39100116
Alignment:
Q  442 ttttttgtggtggccggagtttgaac-atcggactttgcatatattatgc 490  Q
    ||||||||||||||||  |||||||| ||||||| |||||||||||||||    
T  39100067 ttttttgtggtggccgaggtttgaaccatcggaccttgcatatattatgc 39100116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 334831 - 334879
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  334831 ttttttgtggtggccggggtttgaaccccggaccttgcatattttatgc 334879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 916516 - 916468
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  916516 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 916468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 8136616 - 8136664
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||| |||||||| | |||| |||||||||||||||    
T  8136616 ttttttgtggtggtcggggtttgaaccttggaccttgcatatattatgc 8136664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 24428457 - 24428505
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||| | | | |||||||| ||||||||||||||||||||||    
T  24428457 ttttttgtggttgacagggtttgaacctcggactttgcatatattatgc 24428505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 25441484 - 25441532
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  | ||| |||||||||||||||    
T  25441484 ttttttgtggtggccggggtttgaaccccagaccttgcatatattatgc 25441532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 30050412 - 30050460
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||||||||||||  || |  |||||||||||||||    
T  30050412 ttttttgtggtggccggagtttgaaccgcgaatcttgcatatattatgc 30050460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 38130943 - 38130991
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||| ||||||||||| ||||||||  ||||| |||||||||||||||    
T  38130943 tttttggtggtggccggggtttgaaccccggaccttgcatatattatgc 38130991  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 42074180 - 42074132
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||| ||||||||||||| |||| || ||| |||||||||||||||    
T  42074180 ttttttgcggtggccggagttcgaacctcagaccttgcatatattatgc 42074132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 44075140 - 44075188
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  44075140 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 44075188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 45432025 - 45431977
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||| | ||||||||  ||||| |||||||||||||||    
T  45432025 ttttttgtggtggccagggtttgaaccccggaccttgcatatattatgc 45431977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 45885461 - 45885509
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||| |||||||||| |||||||| || ||| |||||||||||||||    
T  45885461 ttttttatggtggccggggtttgaacctcagaccttgcatatattatgc 45885509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 12700981 - 12701029
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  12700981 ttttttgtggtgtccggagttcgaacctcggactttgcatatattatgc 12701029  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 390
Target Start/End: Complemental strand, 19715876 - 19715790
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactct 390  Q
    ||||||||||||   || |||||||||||||||||||||||| || | || |||| ||  ||||||||||||||  |||||||||||    
T  19715876 ttagatgagatggaacatgtcttttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagcgttaaaactct 19715790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 7553756 - 7553708
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||| ||||||||||||| | |||| |||||||||||||||    
T  7553756 ttttttgtggtgtccggagtttgaaccttggaccttgcatatattatgc 7553708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 9241092 - 9241044
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||| ||||||||||| ||||||||||||||| || ||||||||||||    
T  9241092 tttttagtggtggccggggtttgaacatcggaccttacatatattatgc 9241044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 33743652 - 33743604
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||||| ||||||||| |||||| |||||||| ||||||    
T  33743652 ttttttgtggtggccgaagtttgaacctcggaccttgcatattttatgc 33743604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 33996146 - 33996098
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||||||||||||  || ||||||||||||||||||    
T  33996146 ttttttgtggtggtcggagtttgaaccccgaactttgcatatattatgc 33996098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 15682937 - 15683008
Alignment:
Q  321 agtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    ||||| ||||||||||| ||||||| |||| || |||| ||  ||||||||||||||  |||||||||||||    
T  15682937 agtctcttctagcttaatcaaggtcctgagttcgaatccagccttgggcatgcagcagcgttaaaactctta 15683008  T

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Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 2743942 - 2744012
Alignment:
Q  322 gtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||| ||||||||||||||||||| || | || |||| ||  ||||||||||||||  |||||||||||||    
T  2743942 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctta 2744012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 442 - 488
Target Start/End: Original strand, 27134404 - 27134450
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattat 488  Q
    ||||||||||| | ||||||||||||  |||||||||||||||||||    
T  27134404 ttttttgtggttgtcggagtttgaaccccggactttgcatatattat 27134450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 444490 - 444442
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| |||| |||  ||||| |||||||||||||||    
T  444490 ttttttgtggtggccggggtttaaaccccggaccttgcatatattatgc 444442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 2489757 - 2489709
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||  |||||||| || ||| |||||||||||||||    
T  2489757 ttttttgtggtggccgaggtttgaacctcagacgttgcatatattatgc 2489709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 6038259 - 6038307
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||||||||||||  | ||| || ||||||||||||    
T  6038259 ttttttgtggtggccggagtttgaactccagaccttacatatattatgc 6038307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 8999875 - 8999923
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||| ||||||||   ||||||||||||||||||||    
T  8999875 ttttttgtggtggtcggggtttgaaccctggactttgcatatattatgc 8999923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 9192211 - 9192259
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  | |||||| ||||||||||||    
T  9192211 ttttttgtggtggccggggtttgaaccccagactttacatatattatgc 9192259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 11709063 - 11709015
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||| |||||| ||| |||||||| |||||| |||||||||||||||    
T  11709063 ttttttatggtggtcggggtttgaacttcggaccttgcatatattatgc 11709015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 12748978 - 12748930
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||| ||||||||||| ||||||||  ||||| |||||||||||||||    
T  12748978 tttttggtggtggccggggtttgaaccccggaccttgcatatattatgc 12748930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 12958235 - 12958147
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    ||||||||||||   | ||||| ||||||||||||||||||| || | |  |||| ||  ||||||||||||||  |||||||||||||    
T  12958235 ttagatgagatggaactagtctcttctagcttaaccaaggtcatgggtttgaatccagcattgggcatgcagcagcgttaaaactctta 12958147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 13449781 - 13449829
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||| |||||||||  |||||||| ||| ||||||||||||||||||    
T  13449781 ttttttttggtggccgaggtttgaacctcgaactttgcatatattatgc 13449829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 20665347 - 20665395
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  20665347 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 20665395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 27718878 - 27718926
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||| |||||| ||||||||||||  ||||| |||||||||||||||    
T  27718878 ttttttttggtggtcggagtttgaactccggaccttgcatatattatgc 27718926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 28436531 - 28436579
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||| |||||| |||||||||||| | ||||||| ||||||||||||    
T  28436531 ttttttatggtggtcggagtttgaactttggactttacatatattatgc 28436579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 30550710 - 30550758
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  30550710 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 30550758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 35700379 - 35700427
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||||||||||||  || | ||||||||||||||||    
T  35700379 ttttttgtggtggtcggagtttgaaccccgaattttgcatatattatgc 35700427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 37141434 - 37141386
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||| ||||||||||||||||||||  || || |||||||||||||||    
T  37141434 tttttcgtggtggccggagtttgaaccccgaaccttgcatatattatgc 37141386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 44215459 - 44215507
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  44215459 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 44215507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 42745240 - 42745178
Alignment:
Q  330 tagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    ||||||||||||||||||| | || |||| ||  ||||||||||||||| |||||||||||||    
T  42745240 tagcttaaccaaggtcttgggttcgaatccagccttgggcatgcagcaatgttaaaactctta 42745178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 26999187 - 26999139
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||||||||||||  | ||| |||||||||||||||    
T  26999187 ttttttgtggtggccggagtttgaaccgcagaccttgcatatattatgc 26999139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 28439553 - 28439601
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||||||||||||||| ||| |||||||| ||||||    
T  28439553 ttttttgtggtggtcggagtttgaacatcagaccttgcatattttatgc 28439601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 489
Target Start/End: Complemental strand, 22061364 - 22061317
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatg 489  Q
    ||||| ||||||||||| ||||||||||||||| |||||||| |||||    
T  22061364 tttttggtggtggccggggtttgaacatcggaccttgcatattttatg 22061317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 391
Target Start/End: Complemental strand, 44752344 - 44752257
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctt 391  Q
    |||||||||||||  ||||||| |||||||||||||||  || |  | || |||| ||| ||||||||||| ||| ||||||||||||    
T  44752344 ttagatgagatgatacaagtctcttctagcttaaccaaactcctaggttcgaatcaagtcttgggcatgcaacaacgttaaaactctt 44752257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 442 - 488
Target Start/End: Complemental strand, 690865 - 690819
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattat 488  Q
    ||||||||||| |||||||||||||| || ||| |||||||||||||    
T  690865 ttttttgtggtcgccggagtttgaacctcagacgttgcatatattat 690819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 442 - 488
Target Start/End: Complemental strand, 9429292 - 9429246
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattat 488  Q
    ||||||||||||| ||||||||||||  |||| ||||||||||||||    
T  9429292 ttttttgtggtggtcggagtttgaactccggaatttgcatatattat 9429246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 442 - 488
Target Start/End: Original strand, 35065612 - 35065658
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattat 488  Q
    ||||||||||||||||| |||||||| ||| || |||||||||||||    
T  35065612 ttttttgtggtggccggggtttgaacctcgaaccttgcatatattat 35065658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 20663162 - 20663105
Alignment:
Q  433 tttacttggttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||| ||| ||||||||||||||| |||||||||| |||  |||| ||||||||||||    
T  20663162 tttatttgtttttttgtggtggccagagtttgaacctcgttctttacatatattatgc 20663105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 3708770 - 3708722
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  3708770 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 3708722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 5394388 - 5394475
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    ||||||||||||   | ||||| ||||||||||||||||||| || | || |||| ||  ||||||||||||| | |||||||||||||    
T  5394388 ttagatgagatggaacgagtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagc-atgttaaaactctta 5394475  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 10735815 - 10735863
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||| ||||||||||| ||||||||  ||||| |||||||||||||||    
T  10735815 tttttggtggtggccggggtttgaaccccggaccttgcatatattatgc 10735863  T

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Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 11868646 - 11868694
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  11868646 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 11868694  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 12133380 - 12133292
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    ||||||||||||   | ||||| ||||||||||| ||||||| || | || |||| ||  |||| |||||||||| |||||||||||||    
T  12133380 ttagatgagatggaacgagtctcttctagcttaatcaaggtcatgggttcgaatccagccttggacatgcagcaacgttaaaactctta 12133292  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 14735877 - 14735925
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||||||||||||||| ||| || || ||||| ||||||    
T  14735877 ttttttgtggtggccggagtttgaacctcgaaccttacatattttatgc 14735925  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 15447698 - 15447746
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  | ||| |||||||||||||||    
T  15447698 ttttttgtggtggccggggtttgaactccagaccttgcatatattatgc 15447746  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 17981489 - 17981577
Alignment:
Q  304 ttagatgagatgacgcaagtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    ||||||||||||   | ||||| ||||||||||||||| ||| |||  | ||||| ||| ||||||||||| |||  ||||||||||||    
T  17981489 ttagatgagatggaacgagtctcttctagcttaaccaaagtcctgaatttaaatccagtcttgggcatgcaacaacattaaaactctta 17981577  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 20200782 - 20200734
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||   |||| |||||||||||||||    
T  20200782 ttttttgtggtggccggggtttgaaccctggaccttgcatatattatgc 20200734  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 23719012 - 23718964
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||||||||||||| | ||| |||||||| ||||||    
T  23719012 ttttttgtggtggtcggagtttgaacaccagaccttgcatattttatgc 23718964  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 24106684 - 24106636
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||||||||||||| | ||| |||||||| ||||||    
T  24106684 ttttttgtggtggtcggagtttgaacaccagaccttgcatattttatgc 24106636  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 24579652 - 24579700
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||| ||||||||||   |||| |||||||||||||||    
T  24579652 ttttttgtggtggccagagtttgaaccctggaccttgcatatattatgc 24579700  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 24581001 - 24581049
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||| |||||||| ||| || |||||||||||||||    
T  24581001 ttttttgtggtggtcggggtttgaacctcgaaccttgcatatattatgc 24581049  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 25186226 - 25186274
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||| || ||||||||  ||||| |||||||||||||||    
T  25186226 ttttttgtggtggctggggtttgaaccccggaccttgcatatattatgc 25186274  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 29544704 - 29544656
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||| ||||||||||| ||||||||  ||||| |||||||||||||||    
T  29544704 tttttggtggtggccggggtttgaaccccggaccttgcatatattatgc 29544656  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 31815871 - 31815919
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||| ||||||||  ||||| |||||||||||||||    
T  31815871 ttttttgtggtggtcggggtttgaaccccggaccttgcatatattatgc 31815919  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 33064063 - 33064015
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||| ||||||||||||||| ||||  ||||| |||||||||||||||    
T  33064063 tttttggtggtggccggagttcgaactccggaccttgcatatattatgc 33064015  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 35360039 - 35360087
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||| ||||||||  ||||| |||||||| ||||||    
T  35360039 ttttttgtggtggccggggtttgaactccggaccttgcatattttatgc 35360087  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 36264463 - 36264511
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||| ||| ||||||||  || ||||||||||||||||||    
T  36264463 ttttttgtggtggtcggggtttgaaccccgaactttgcatatattatgc 36264511  T

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Target: scaffold0038 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Original strand, 31906 - 31954
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    |||||||||||||||||||| |||||  ||||| |||||||||||||||    
T  31906 ttttttgtggtggccggagtgtgaaccccggaccttgcatatattatgc 31954  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 239884 - 239836
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||| ||||||| ||||||||  |||||||||||||||||||||    
T  239884 ttttttgtgatggccggggtttgaactccggactttgcatatattatgc 239836  T

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Target: scaffold0182 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 26340 - 26410
Alignment:
Q  322 gtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 392  Q
    |||| ||||||||||||||||||| || | || |||| ||  ||||||||||||||  |||||||||||||    
T  26340 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctta 26410  T

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Target: scaffold0350 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 1325 - 1277
Alignment:
Q  442 ttttttgtggtggccggagtttgaacatcggactttgcatatattatgc 490  Q
    ||||||||||||||||||||||||||  | ||| || ||||||||||||    
T  1325 ttttttgtggtggccggagtttgaactccagaccttacatatattatgc 1277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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