View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19084_high_15 (Length: 450)
Name: NF19084_high_15
Description: NF19084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19084_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 19 - 438
Target Start/End: Original strand, 7604441 - 7604860
Alignment:
| Q |
19 |
atttcttcccctctaatctctcaactaactcgccgcaaatttcatcatctccgatggccggacagttctccagctccgttgaattcggtctcaatctctc |
118 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7604441 |
atttcttcttctctaatctctcaactaactcgccgcaaatttcaccatctccgatggccggacagttctccagctccgttgaattcggtctcaatctctc |
7604540 |
T |
|
| Q |
119 |
taaacgaattcaccacacaaaactatcagctccagctccattaccggagatgacaaggtcgattgatgaacacctaccatcggcgccgatgtgttacgcg |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |
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| T |
7604541 |
aaaacgaattcaccacacaaaactatcagctccagctccattaccggagatgacaaggtcgattgatgaacacctaccgtcagcgccgatgtgttacgcg |
7604640 |
T |
|
| Q |
219 |
gtgatacctgatccagacatagtagacaatcctgacattcgaagctatcaaccgtatgtgtacggacggtgtgatcctccggcgttgataccacttcagc |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
7604641 |
gtgatacctgatccagacatagtagacaatcctgacattcgaagctatcaaccgtatgtgtacggacggtgtgatcctccagcgttgataccacttcagc |
7604740 |
T |
|
| Q |
319 |
ttcaaggaattgaaatggacgttgattgttgtttggatacggcgtttgtaactgtcaccggacggtggcgcgtgcactgcgtgaggggaagttctttgtg |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7604741 |
ttcaaggaattgaaatggacgttgattgttgtttggatacggcgtttgtaactgtcaccggacggtggcgcgtgcactgcgtgaggggaagttctttgtg |
7604840 |
T |
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| Q |
419 |
tgattgtcaagttgctattc |
438 |
Q |
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|||||||||||||||||||| |
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| T |
7604841 |
tgattgtcaagttgctattc |
7604860 |
T |
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