View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19084_high_42 (Length: 278)
Name: NF19084_high_42
Description: NF19084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19084_high_42 |
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Alignment Details
Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 26732927 - 26732985
Alignment:
| Q |
47 |
acataacagtagagccatcactgagagttttaaatgaagaaagtgattaattaagcagt |
105 |
Q |
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| T |
26732927 |
acataacagtagagccatcgctgagagttttaaatgaagaaagtgattaattaagcagt |
26732985 |
T |
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Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 26733086 - 26733140
Alignment:
| Q |
210 |
ttgcaccattcataagagaatgagacataaccaagccaaaagttatgttctattt |
264 |
Q |
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| T |
26733086 |
ttgcgccattcataagagaatgagacataaccaagccaaaagtgatgttctattt |
26733140 |
T |
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