View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19084_high_49 (Length: 259)
Name: NF19084_high_49
Description: NF19084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19084_high_49 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 47004260 - 47004518
Alignment:
| Q |
1 |
atgagttgttcatgtgattcaaacattcaaagaaaattcaaacctcggccacgccaagattgaggtcatccgtgattccagattgagcaggggatgaata |
100 |
Q |
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| T |
47004260 |
atgagttgttcatgtgattcaaacattcaaagaaaattcaaacctcggccacgccaagattgaggtcatccgtgattccagattgagcaggggatgaata |
47004359 |
T |
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| Q |
101 |
acccacctgcaagatgagagtgatagagttcattctgaattgaattctgatatagtatatcataaacttattaattaaatccctccaaaaaatgatgtaa |
200 |
Q |
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| T |
47004360 |
acccacctgcaagatgagagtgatagagttcattctgaattgaattctgatatagtatatcataaacttattaattaaatccctccaaaaaatgatgtaa |
47004459 |
T |
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| Q |
201 |
atgagaacttacagcagagccaaaaacataagaaccagagacagcagcaagggtggtaa |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47004460 |
atgagaacttacagcagagccaaaaacataagaaccagagacagcagcaagggtggtaa |
47004518 |
T |
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