View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19084_high_51 (Length: 254)

Name: NF19084_high_51
Description: NF19084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19084_high_51
NF19084_high_51
[»] chr7 (60 HSPs)
chr7 (92-212)||(9689423-9689555)
chr7 (92-238)||(1853166-1853320)
chr7 (174-238)||(9689366-9689430)
chr7 (92-230)||(3092378-3092527)
chr7 (92-175)||(10931956-10932039)
chr7 (92-173)||(27484820-27484901)
chr7 (92-175)||(2936307-2936391)
chr7 (96-238)||(15635155-15635309)
chr7 (93-173)||(15011865-15011946)
chr7 (92-173)||(43393772-43393853)
chr7 (174-238)||(11625120-11625184)
chr7 (110-173)||(5864675-5864738)
chr7 (110-173)||(13263951-13264014)
chr7 (110-173)||(26254787-26254850)
chr7 (95-173)||(32946353-32946431)
chr7 (92-173)||(8391027-8391108)
chr7 (110-175)||(31863938-31864003)
chr7 (92-173)||(33441094-33441175)
chr7 (110-175)||(43707154-43707219)
chr7 (110-173)||(2300904-2300967)
chr7 (110-173)||(3401884-3401947)
chr7 (113-172)||(17155693-17155752)
chr7 (110-173)||(31307933-31307996)
chr7 (110-173)||(31749402-31749465)
chr7 (99-173)||(2240651-2240725)
chr7 (99-173)||(2241085-2241159)
chr7 (110-172)||(2514143-2514205)
chr7 (95-173)||(37913883-37913961)
chr7 (110-175)||(442617-442682)
chr7 (185-230)||(10975663-10975708)
chr7 (92-173)||(18828664-18828745)
chr7 (110-175)||(20055048-20055113)
chr7 (95-175)||(22610230-22610310)
chr7 (92-172)||(25601921-25602002)
chr7 (189-238)||(27082672-27082721)
chr7 (189-238)||(27195580-27195629)
chr7 (177-238)||(42957502-42957563)
chr7 (198-238)||(2936265-2936305)
chr7 (185-225)||(15011938-15011978)
chr7 (110-166)||(21022595-21022651)
chr7 (92-172)||(42957580-42957660)
chr7 (92-175)||(45687809-45687893)
chr7 (110-173)||(11576800-11576863)
chr7 (110-173)||(26202390-26202453)
chr7 (110-173)||(30632080-30632143)
chr7 (185-228)||(32199956-32199999)
chr7 (138-173)||(34258336-34258371)
chr7 (110-173)||(35158265-35158328)
chr7 (110-173)||(38192793-38192856)
chr7 (110-172)||(20164335-20164397)
chr7 (110-172)||(21522000-21522062)
chr7 (112-166)||(40938200-40938254)
chr7 (122-175)||(2624799-2624852)
chr7 (110-175)||(12005491-12005556)
chr7 (138-175)||(31750830-31750867)
chr7 (138-175)||(47370263-47370300)
chr7 (104-175)||(7211739-7211811)
chr7 (198-230)||(14675660-14675692)
chr7 (110-174)||(15721012-15721076)
chr7 (196-232)||(20089275-20089311)
[»] chr4 (40 HSPs)
chr4 (92-212)||(13555800-13555932)
chr4 (174-238)||(13555743-13555807)
chr4 (92-238)||(8809943-8810100)
chr4 (92-173)||(9780517-9780599)
chr4 (112-226)||(5283685-5283810)
chr4 (99-173)||(32682401-32682475)
chr4 (110-174)||(25244588-25244652)
chr4 (110-173)||(3652353-3652416)
chr4 (92-174)||(23091845-23091928)
chr4 (110-173)||(30919000-30919063)
chr4 (110-173)||(42056061-42056124)
chr4 (96-173)||(21744798-21744876)
chr4 (110-172)||(32681928-32681990)
chr4 (110-172)||(39152039-39152101)
chr4 (92-173)||(18165119-18165200)
chr4 (110-175)||(23184839-23184903)
chr4 (110-175)||(50773371-50773436)
chr4 (92-175)||(16734144-16734228)
chr4 (93-172)||(49277851-49277931)
chr4 (110-173)||(14121476-14121539)
chr4 (110-173)||(17696294-17696357)
chr4 (123-173)||(2032645-2032695)
chr4 (110-172)||(7913343-7913405)
chr4 (110-172)||(21507908-21507970)
chr4 (110-172)||(22854046-22854108)
chr4 (110-175)||(18510065-18510130)
chr4 (110-175)||(30409333-30409398)
chr4 (112-173)||(39133169-39133230)
chr4 (138-175)||(46088158-46088195)
chr4 (198-238)||(9780470-9780510)
chr4 (98-173)||(29172724-29172800)
chr4 (110-174)||(49166728-49166792)
chr4 (92-134)||(25786231-25786274)
chr4 (110-173)||(49296231-49296294)
chr4 (110-173)||(52194394-52194457)
chr4 (202-232)||(16876021-16876051)
chr4 (110-172)||(41325443-41325505)
chr4 (177-226)||(42161376-42161426)
chr4 (185-226)||(29172691-29172732)
chr4 (110-166)||(5514592-5514648)
[»] chr2 (40 HSPs)
chr2 (92-238)||(42223089-42223247)
chr2 (99-175)||(29949627-29949703)
chr2 (110-173)||(18756579-18756642)
chr2 (92-172)||(16590512-16590593)
chr2 (92-173)||(41906055-41906136)
chr2 (92-173)||(35791059-35791141)
chr2 (110-175)||(7008001-7008066)
chr2 (110-175)||(36525358-36525423)
chr2 (110-173)||(2526434-2526497)
chr2 (110-173)||(7318174-7318237)
chr2 (110-173)||(17886645-17886708)
chr2 (95-173)||(31989421-31989500)
chr2 (110-173)||(34831574-34831637)
chr2 (110-173)||(38127845-38127908)
chr2 (110-172)||(1975713-1975775)
chr2 (110-172)||(18048899-18048961)
chr2 (110-172)||(42794094-42794156)
chr2 (110-172)||(43830733-43830795)
chr2 (182-238)||(11915153-11915210)
chr2 (185-226)||(35791133-35791174)
chr2 (110-174)||(15543942-15544006)
chr2 (110-166)||(19253482-19253538)
chr2 (110-166)||(22846216-22846272)
chr2 (110-174)||(31260865-31260928)
chr2 (110-174)||(38949939-38950003)
chr2 (110-166)||(39373076-39373132)
chr2 (110-173)||(25103965-25104028)
chr2 (185-224)||(26498709-26498748)
chr2 (110-173)||(26498740-26498803)
chr2 (110-172)||(874436-874498)
chr2 (196-230)||(7007904-7007938)
chr2 (111-173)||(29883999-29884061)
chr2 (110-175)||(9419727-9419792)
chr2 (110-175)||(10071358-10071423)
chr2 (185-222)||(16590586-16590623)
chr2 (110-163)||(33218565-33218618)
chr2 (112-173)||(33315226-33315287)
chr2 (110-173)||(15580597-15580661)
chr2 (188-224)||(16204506-16204542)
chr2 (139-175)||(23381271-23381307)
[»] chr3 (40 HSPs)
chr3 (92-230)||(17030593-17030742)
chr3 (92-238)||(25124910-25125067)
chr3 (92-173)||(25158853-25158934)
chr3 (95-173)||(31293682-31293760)
chr3 (186-230)||(7308179-7308223)
chr3 (107-175)||(28735522-28735590)
chr3 (110-173)||(13041593-13041656)
chr3 (110-173)||(13049670-13049733)
chr3 (110-173)||(52839529-52839592)
chr3 (177-230)||(43426365-43426419)
chr3 (110-175)||(19111168-19111233)
chr3 (110-173)||(7272642-7272705)
chr3 (100-172)||(17582235-17582307)
chr3 (110-173)||(2985727-2985790)
chr3 (110-173)||(22817964-22818027)
chr3 (110-173)||(45151706-45151769)
chr3 (110-172)||(13439795-13439857)
chr3 (177-238)||(17582472-17582533)
chr3 (110-175)||(32721735-32721800)
chr3 (92-167)||(18359427-18359503)
chr3 (110-174)||(52962313-52962377)
chr3 (110-173)||(5572183-5572246)
chr3 (110-173)||(14870160-14870223)
chr3 (110-173)||(26770150-26770213)
chr3 (110-173)||(31073887-31073950)
chr3 (185-224)||(31293651-31293690)
chr3 (138-173)||(34314781-34314816)
chr3 (110-172)||(300250-300312)
chr3 (123-173)||(7226166-7226216)
chr3 (110-172)||(14004495-14004557)
chr3 (110-172)||(14220599-14220661)
chr3 (110-172)||(14224826-14224888)
chr3 (107-173)||(26932440-26932506)
chr3 (138-172)||(28298187-28298221)
chr3 (185-238)||(7013307-7013360)
chr3 (185-230)||(7272697-7272742)
chr3 (92-173)||(7308106-7308186)
chr3 (110-166)||(3505237-3505293)
chr3 (110-166)||(16897325-16897381)
chr3 (198-238)||(18359373-18359413)
[»] chr8 (40 HSPs)
chr8 (92-175)||(9235351-9235434)
chr8 (110-175)||(9305634-9305699)
chr8 (110-175)||(2873531-2873596)
chr8 (108-238)||(23245571-23245713)
chr8 (92-226)||(24528805-24528948)
chr8 (95-238)||(23288916-23289072)
chr8 (110-173)||(24768621-24768684)
chr8 (110-173)||(29346087-29346150)
chr8 (110-173)||(31974920-31974983)
chr8 (110-173)||(32684792-32684855)
chr8 (110-175)||(5566711-5566776)
chr8 (110-175)||(23389101-23389166)
chr8 (110-175)||(41509609-41509674)
chr8 (182-238)||(24375831-24375887)
chr8 (110-166)||(37545128-37545184)
chr8 (110-173)||(13572622-13572685)
chr8 (110-173)||(24331558-24331621)
chr8 (110-173)||(30872625-30872688)
chr8 (110-173)||(38703827-38703890)
chr8 (92-226)||(14698097-14698242)
chr8 (182-224)||(18029746-18029788)
chr8 (92-173)||(29211934-29212015)
chr8 (112-173)||(30221855-30221916)
chr8 (110-174)||(11830258-11830322)
chr8 (188-224)||(32393451-32393487)
chr8 (110-166)||(34227409-34227465)
chr8 (138-173)||(28786490-28786525)
chr8 (95-173)||(5600183-5600261)
chr8 (95-173)||(5640359-5640437)
chr8 (110-172)||(5642791-5642853)
chr8 (110-172)||(5644732-5644794)
chr8 (112-174)||(10328991-10329053)
chr8 (182-224)||(15935585-15935627)
chr8 (110-172)||(38711853-38711915)
chr8 (112-173)||(8442147-8442208)
chr8 (92-173)||(13174933-13175014)
chr8 (110-174)||(12478656-12478720)
chr8 (92-124)||(24754628-24754660)
chr8 (110-173)||(25653933-25653997)
chr8 (188-224)||(38703796-38703832)
[»] chr1 (30 HSPs)
chr1 (92-172)||(33864115-33864196)
chr1 (92-172)||(33916726-33916807)
chr1 (110-236)||(25059945-25060082)
chr1 (110-173)||(21770837-21770900)
chr1 (110-173)||(22387405-22387468)
chr1 (110-173)||(26190813-26190876)
chr1 (92-173)||(44228339-44228421)
chr1 (92-172)||(1701151-1701231)
chr1 (92-172)||(5469355-5469435)
chr1 (110-173)||(5932044-5932107)
chr1 (110-172)||(9209657-9209719)
chr1 (110-175)||(13436932-13436997)
chr1 (92-172)||(44078593-44078674)
chr1 (96-172)||(12126197-12126273)
chr1 (110-173)||(14909988-14910051)
chr1 (92-127)||(17890132-17890167)
chr1 (96-147)||(17890292-17890343)
chr1 (114-173)||(21853758-21853817)
chr1 (110-173)||(23161908-23161971)
chr1 (185-224)||(41189974-41190013)
chr1 (110-173)||(47231199-47231262)
chr1 (110-172)||(5457163-5457225)
chr1 (177-230)||(5469452-5469506)
chr1 (110-172)||(20158880-20158942)
chr1 (177-223)||(22315288-22315334)
chr1 (110-172)||(26399087-26399149)
chr1 (120-173)||(22152076-22152129)
chr1 (198-238)||(13436999-13437039)
chr1 (117-173)||(31883550-31883606)
chr1 (182-230)||(44228410-44228458)
[»] scaffold0004 (2 HSPs)
scaffold0004 (92-238)||(82212-82369)
scaffold0004 (110-173)||(212595-212658)
[»] chr5 (37 HSPs)
chr5 (92-226)||(20355079-20355224)
chr5 (92-177)||(18231985-18232071)
chr5 (99-173)||(8855469-8855543)
chr5 (189-238)||(13153677-13153726)
chr5 (92-173)||(31567697-31567778)
chr5 (110-173)||(11721348-11721411)
chr5 (110-175)||(7577920-7577985)
chr5 (110-175)||(31312681-31312746)
chr5 (110-175)||(34309538-34309603)
chr5 (93-226)||(42778870-42779013)
chr5 (110-166)||(4414009-4414065)
chr5 (110-174)||(4561832-4561896)
chr5 (112-172)||(23159551-23159611)
chr5 (110-173)||(12148138-12148201)
chr5 (110-173)||(22756294-22756357)
chr5 (110-173)||(25233856-25233919)
chr5 (110-173)||(25298016-25298079)
chr5 (110-173)||(31920142-31920205)
chr5 (110-173)||(41123374-41123437)
chr5 (95-173)||(40765451-40765529)
chr5 (138-175)||(17190798-17190835)
chr5 (92-173)||(21144177-21144258)
chr5 (186-230)||(15885567-15885611)
chr5 (198-238)||(17668732-17668772)
chr5 (110-173)||(25962884-25962947)
chr5 (110-173)||(28796429-28796492)
chr5 (110-173)||(30916565-30916628)
chr5 (110-173)||(42368519-42368582)
chr5 (119-173)||(13153722-13153776)
chr5 (110-172)||(21039947-21040009)
chr5 (189-226)||(4414068-4414105)
chr5 (112-173)||(6117670-6117731)
chr5 (92-169)||(23108867-23108944)
chr5 (110-175)||(35687406-35687471)
chr5 (178-226)||(21144113-21144161)
chr5 (119-175)||(23188793-23188849)
chr5 (110-174)||(38874566-38874630)
[»] chr6 (35 HSPs)
chr6 (110-173)||(8237721-8237784)
chr6 (110-175)||(9676448-9676513)
chr6 (92-225)||(9044463-9044608)
chr6 (110-173)||(9222557-9222620)
chr6 (110-173)||(10546092-10546155)
chr6 (110-166)||(2270535-2270591)
chr6 (93-230)||(9662752-9662900)
chr6 (110-173)||(12292945-12293008)
chr6 (92-173)||(20757498-20757580)
chr6 (200-238)||(25167037-25167075)
chr6 (110-175)||(3108709-3108774)
chr6 (116-173)||(14291160-14291217)
chr6 (110-175)||(32216968-32217033)
chr6 (110-174)||(1227759-1227823)
chr6 (110-166)||(17158350-17158406)
chr6 (92-175)||(25166916-25167000)
chr6 (110-173)||(9234927-9234990)
chr6 (114-173)||(10343584-10343643)
chr6 (110-173)||(13729166-13729229)
chr6 (110-173)||(16119776-16119839)
chr6 (185-228)||(18274296-18274339)
chr6 (110-173)||(22495929-22495992)
chr6 (110-173)||(26882159-26882222)
chr6 (110-173)||(29942608-29942671)
chr6 (110-172)||(26475845-26475907)
chr6 (110-175)||(34414498-34414563)
chr6 (186-238)||(3816629-3816681)
chr6 (110-166)||(7321997-7322053)
chr6 (188-224)||(16659661-16659697)
chr6 (102-173)||(18274331-18274403)
chr6 (110-174)||(21544213-21544277)
chr6 (110-174)||(22362701-22362765)
chr6 (110-166)||(32603721-32603776)
chr6 (92-175)||(33199983-33200067)
chr6 (188-224)||(34077544-34077580)
[»] scaffold0002 (1 HSPs)
scaffold0002 (110-174)||(332146-332210)
[»] scaffold0003 (1 HSPs)
scaffold0003 (92-174)||(316497-316578)
[»] scaffold0142 (1 HSPs)
scaffold0142 (92-174)||(34978-35060)
[»] scaffold0010 (1 HSPs)
scaffold0010 (92-173)||(145120-145201)
[»] scaffold0430 (1 HSPs)
scaffold0430 (110-173)||(12713-12776)
[»] scaffold0258 (1 HSPs)
scaffold0258 (110-173)||(18830-18893)
[»] scaffold0067 (1 HSPs)
scaffold0067 (138-238)||(25795-25902)
[»] scaffold0121 (1 HSPs)
scaffold0121 (110-173)||(12550-12613)
[»] scaffold1462 (1 HSPs)
scaffold1462 (188-230)||(253-295)
[»] scaffold0110 (1 HSPs)
scaffold0110 (97-173)||(23290-23367)
[»] scaffold0026 (1 HSPs)
scaffold0026 (112-172)||(84258-84318)
[»] scaffold0022 (1 HSPs)
scaffold0022 (110-174)||(63260-63324)


Alignment Details
Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 92 - 212
Target Start/End: Complemental strand, 9689555 - 9689423
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg------------accgaa 179  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||            ||||||    
T  9689555 ttgtttagatttcaaccctgtaattcaaagatttttggttttggtccttcatgaattatgactgtacaaaatcgatgatatggcatagggataaaccgaa 9689456  T
Q  180 atattgatgatatggtagggggtaaaccgaaat 212  Q
    |||||||||||||||||||||||||||||||||    
T  9689455 atattgatgatatggtagggggtaaaccgaaat 9689423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 92 - 238
Target Start/End: Original strand, 1853166 - 1853320
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac----------cgaaat 181  Q
    ||||||||||||| ||| |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||          ||||||    
T  1853166 ttgtttagattcccaccctgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatgacagggggtaaacgaaat 1853265  T
Q  182 attgatgatatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    || ||||||| || |||||||||  ||||||||||||||||| ||||||||||||||    
T  1853266 atcgatgataaggcagggggtaa--cgaaattctctcaaatttcaggggacgaaagt 1853320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 9689430 - 9689366
Alignment:
Q  174 accgaaatattgatgatatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  9689430 accgaaatattgatgatatggtagggggtaaaccgaaattctctcaaattacaagggacaaaagt 9689366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 230
Target Start/End: Complemental strand, 3092527 - 3092378
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac-----------cgaaa 180  Q
    ||||||||||||||||| |||||||| ||||||||||  ||||   |||||| |||| ||||||||||||||||| ||||||||           |||||    
T  3092527 ttgtttagattccaaccctgtaatttgaagatttttgtatttggaccttcattaattttgactgtacaaaatcgacgatatgacatggggtaaatcgaaa 3092428  T
Q  181 tattgatgatatggtagggggtaaaccgaaattctctcaaattacagggg 230  Q
    |||  ||||||||| ||||||||||||| ||||||||||||||| |||||    
T  3092427 tatcaatgatatggaagggggtaaaccgtaattctctcaaattatagggg 3092378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 10931956 - 10932039
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||||||||| ||||| |||||||| |||| |||||||||||   ||||||||||| ||| ||||||||||||||||||||||    
T  10931956 ttgtttagatttcaaccctgtaatttgaagaattttggttttggaccttcatgaattttgattgtacaaaatcgatgatatgac 10932039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 27484820 - 27484901
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||| |||||||||||||| |||||||||| |||||   ||||||||||| |||||||||||||| | |||||||    
T  27484820 ttgtttagatttcaaccatgtaatttgaagatttttgattttggatcttcatgaattttgactgtacaaaattggtgatatg 27484901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 2936391 - 2936307
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||||||||| |||||||||||||| |||||| |||||||||    |||||| |||| ||||||||||||||||||||||||||    
T  2936391 ttgtttagatttcaaccatgtaatttgaagattctttggttttcgaccttcataaattttgactgtacaaaatcgatgatatgac 2936307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 238
Target Start/End: Original strand, 15635155 - 15635309
Alignment:
Q  96 ttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg-----------accgaaatatt 184  Q
    ||||| ||||||| |||||||| ||||||||||||||||   ||||||||||| | || ||| ||||| |||||||||           ||||||||||     
T  15635155 ttagaatccaaccctgtaatttgaagatttttggttttggaccttcatgaattttaaccgtataaaatagatgatatggcatggggtaaaccgaaatatc 15635254  T
Q  185 gatgatatggtaggggg-taaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||||||||||||||||| |||| |||||||||||||| ||| ||||| |||||||    
T  15635255 gatgatatggtaggggggtaaaacgaaattctctcaagttatagggggcgaaagt 15635309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 15011865 - 15011946
Alignment:
Q  93 tgtttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||||| ||||| |||||||| |||||| |||||||||||  || |||||||| |||| |||||||||||||||||||    
T  15011865 tgtttagatttcaaccctgtaatttgaagattctttggttttgaacctgcatgaattttgacggtacaaaatcgatgatatg 15011946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 43393772 - 43393853
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||| ||||||| ||||||||||||||||||||||||     |||||||||| |||| |||||||||||| ||||||    
T  43393772 ttgtttagaatccaaccctgtaatttaaagatttttggtttttgacattcatgaattttgaccgtacaaaatcgacgatatg 43393853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 11625120 - 11625184
Alignment:
Q  174 accgaaatattgatgatatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||||||||||  ||||||||||||||||||||||||||||||| |||| |||| ||| |||||||    
T  11625120 accgaaatatcaatgatatggtagggggtaaaccgaaattctcacaaactacaaggggcgaaagt 11625184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 5864738 - 5864675
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  5864738 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 5864675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 13263951 - 13264014
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  13263951 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 13264014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 26254850 - 26254787
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  26254850 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 26254787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 32946353 - 32946431
Alignment:
Q  95 tttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||  || |||||||| ||| ||||||||||||   ||||||||||| | ||||||||||||||||||||||    
T  32946353 tttagattccgtccttgtaatttgaagttttttggttttggaccttcatgaattttaactgtacaaaatcgatgatatg 32946431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 8391027 - 8391108
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||| || ||||||||  ||||||||| |||||   ||||||||||| |||||||||||||| |||||||||    
T  8391027 ttgtttagtttccatccttgtaatttgtagatttttgattttggaccttcatgaattttgactgtacaaaatagatgatatg 8391108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 31864003 - 31863938
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||| ||||||||||||   ||||||||||  ||||||||||||||||||||||||||    
T  31864003 tgtaatttgaagttttttggttttggaccttcatgaatcttgactgtacaaaatcgatgatatgac 31863938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 33441175 - 33441094
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||| || |||||||| ||||||| ||||||||   ||||||||||| ||| |||||||||| |||||||||    
T  33441175 ttgtttagtttccatccttgtaatttgaagatttctggttttggaccttcatgaattttgattgtacaaaatagatgatatg 33441094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 43707219 - 43707154
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||| | ||||||||    
T  43707219 tgtaatttgaagatttttggttttggcccttcatgaattttgactgtacaaaatcaaagatatgac 43707154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 2300904 - 2300967
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| |||||| ||| |||||   ||||||||||| ||||||||||||||||||||||||    
T  2300904 tgtaatttgaagattcttgattttggaccttcatgaattttgactgtacaaaatcgatgatatg 2300967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 3401884 - 3401947
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| |||| |||||||||||| ||||||    
T  3401884 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgacgatatg 3401947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 17155693 - 17155752
Alignment:
Q  113 aatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    ||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| |||||    
T  17155693 aatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 17155752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 31307933 - 31307996
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||| ||||||   ||||||||||| ||||||||||||||||| ||||||    
T  31307933 tgtaatttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatg 31307996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 31749402 - 31749465
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| ||||||||||||   ||||||||||| ||||| ||||||||||||||||||    
T  31749402 tgtaatttgaagttttttggttttggaccttcatgaattttgactatacaaaatcgatgatatg 31749465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 2240725 - 2240651
Alignment:
Q  99 gattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||| || |||||||| ||  ||||||||||||   ||||||||||| |||| |||||||||||||||||||    
T  2240725 gattccatccctgtaatttgaaattttttggttttggaccttcatgaattttgacggtacaaaatcgatgatatg 2240651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 2241159 - 2241085
Alignment:
Q  99 gattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||| || |||||||| ||| ||||||||||||   ||||||||||| |||| ||||||||||||| |||||    
T  2241159 gattccatccttgtaatttgaagttttttggttttggaccttcatgaattttgaccgtacaaaatcgataatatg 2241085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 2514205 - 2514143
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| |||||||||| |||||   |||| |||||| |||||||||||||||||||||||    
T  2514205 tgtaatttgaagatttttgattttggaccttcgtgaattttgactgtacaaaatcgatgatat 2514143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 37913961 - 37913883
Alignment:
Q  95 tttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| || || |||| ||| ||||| ||||||||||   ||||||||||| ||||| ||||||||||||||||||    
T  37913961 tttagatttcatccttgtagtttgaagatatttggttttggatcttcatgaattttgactttacaaaatcgatgatatg 37913883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 442617 - 442682
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||| || ||||||||| ||||||   ||||||||||| ||||||||||||||||| ||||||||    
T  442617 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatgac 442682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 10975663 - 10975708
Alignment:
Q  185 gatgatatggtagggggtaaaccgaaattctctcaaattacagggg 230  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||    
T  10975663 gatgatatgatagggggtaaaccgaaatttgctcaaattacagggg 10975708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 18828664 - 18828745
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||| || |||||||||||||||| ||||||||   |||||| |||| | ||| |||||||| |||||||||    
T  18828664 ttgtttagtttccatccttgtaatttaaagatttctggttttggaccttcataaattttcactatacaaaatagatgatatg 18828745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 20055113 - 20055048
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||||||||||||||||    |||||||||| |||||||||||||| || ||||||||    
T  20055113 tgtaatttgaagatttttggttttggactttcatgaattttgactgtacaaaattgaagatatgac 20055048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 22610310 - 22610230
Alignment:
Q  95 tttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||||||||||| ||||||||| |||||| | || ||||||  ||| ||||||| ||||||||||||||| ||||||||||    
T  22610310 tttagattccaacaatgtaatttgaagattatgtgtttttgaacctttatgaattttgactgtacaaaatc-atgatatgac 22610230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 25602002 - 25601921
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagattttt-ggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    ||||||||||||||| | |||||||| ||||||||| |||||| |   |||||||||| ||||||||||| || ||||||||    
T  25602002 ttgtttagattccaatcctgtaatttgaagatttttcggttttaaacattcatgaattttgactgtacaatattgatgatat 25601921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 27082721 - 27082672
Alignment:
Q  189 atatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    |||||| |||||||||||| ||||| |||||||||||||||| |||||||    
T  27082721 atatggcagggggtaaaccaaaattatctcaaattacagggggcgaaagt 27082672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 27195580 - 27195629
Alignment:
Q  189 atatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    |||||| |||||||||||| ||||| |||||||||||||||| |||||||    
T  27195580 atatggcagggggtaaaccaaaattatctcaaattacagggggcgaaagt 27195629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 42957563 - 42957502
Alignment:
Q  177 gaaatattgatgatatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||||||| || ||||||  || ||||||| |||||||||||||||||||| |||||||||||    
T  42957563 gaaatatcgaggatatgacagagggtaaatcgaaattctctcaaattacaagggacgaaagt 42957502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 2936305 - 2936265
Alignment:
Q  198 ggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  2936305 ggggtaaacccaaattctctcaaattacagggggcgaaagt 2936265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 15011938 - 15011978
Alignment:
Q  185 gatgatatggtagggggtaaaccgaaattctctcaaattac 225  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  15011938 gatgatatggcagagggtaaaccgaaattctctcaaattac 15011978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 21022651 - 21022595
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    |||||||| ||||||||||||||||   ||||||||||| |||| ||||||||||||    
T  21022651 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcga 21022595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 42957660 - 42957580
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||| ||||| |||| |||||||| |||||||||||||||    ||||||||| | ||| ||||||||||| |||||||    
T  42957660 ttgtttggattctaaccctgtaatttgaagatttttggttttcgaccttcatgaactttgattgtacaaaatcaatgatat 42957580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 45687893 - 45687809
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||||||||| ||||| | |||||| |||||| ||| |||||    ||||||||||| |||| |||||||||||||||||||||    
T  45687893 ttgtttagatttcaaccttataatttgaagattatttcgttttagaccttcatgaattttgaccgtacaaaatcgatgatatgac 45687809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 11576863 - 11576800
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||| ||||||   ||||||||||| ||||||||| ||||||| ||||||    
T  11576863 tgtaatttgaagattttttgttttggaccttcatgaattttgactgtacgaaatcgaagatatg 11576800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 26202390 - 26202453
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| |||||||||||||  | ||||||| | |||| |||||||||||||||||||    
T  26202390 tgtaatttgaagttttttggttttgagccatcatgaaatttgaccgtacaaaatcgatgatatg 26202453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 30632080 - 30632143
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| |||||| ||||||| || ||||||    
T  30632080 tgtaatttgaagatttttggttttggaccttcatgaattttgactgcacaaaattgaagatatg 30632143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 32199999 - 32199956
Alignment:
Q  185 gatgatatggtagggggtaaaccgaaattctctcaaattacagg 228  Q
    |||||||||||||||||||||||||||||  |||||||| ||||    
T  32199999 gatgatatggtagggggtaaaccgaaatttgctcaaattgcagg 32199956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 173
Target Start/End: Complemental strand, 34258371 - 34258336
Alignment:
Q  138 cttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||| ||||||||||||||||||||||||    
T  34258371 cttcatgaattttgactgtacaaaatcgatgatatg 34258336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 35158265 - 35158328
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| |||||||||| |||||   ||||||||||| ||||| ||||||||||| ||||||    
T  35158265 tgtaatttgaagatttttgattttggaccttcatgaattttgactatacaaaatcgaagatatg 35158328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 38192856 - 38192793
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| ||||||||||||   ||||||||||| |||| |||||||||| ||||||||    
T  38192856 tgtaatttgaagttttttggttttggaccttcatgaattttgacagtacaaaatcaatgatatg 38192793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 20164397 - 20164335
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||| ||||||| ||||||||||||||||| |||||    
T  20164397 tgtaatttgaatatttttggttttggaccttaatgaattttgactgtacaaaatcgaagatat 20164335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 21522062 - 21522000
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    ||||| || ||||||||| ||||||   ||||||||||| ||||||||||||||||| |||||    
T  21522062 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatat 21522000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 40938200 - 40938254
Alignment:
Q  112 taatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    ||||||||||||||||||||||    ||||||||||| |||| ||||||||||||    
T  40938200 taatttaaagatttttggttttagaccttcatgaattttgacagtacaaaatcga 40938254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 2624852 - 2624799
Alignment:
Q  122 atttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||||||||   ||||||||||| ||| ||||||||||||| ||||||||    
T  2624852 atttttggttttgtaccttcatgaattttgattgtacaaaatcgaagatatgac 2624799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 12005556 - 12005491
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||| || ||||||||| ||||||    |||||||||| ||||||||||||||||| ||||||||    
T  12005556 tgtaacttgaagattttttgttttggactttcatgaattttgactgtacaaaatcgaagatatgac 12005491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 31750830 - 31750867
Alignment:
Q  138 cttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  31750830 cttcatgaattttgactgtacaaaatcgaagatatgac 31750867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 47370263 - 47370300
Alignment:
Q  138 cttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  47370263 cttcatgaattttgactgtacaaaatcgaagatatgac 47370300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 7211811 - 7211739
Alignment:
Q  104 caaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||||||||||||||||||| |||| ||||    ||| ||||||| |||| |||||||||| ||||||||||    
T  7211811 caaccatgtaatttaaagattctttgattttttatctttatgaattttgacggtacaaaatcaatgatatgac 7211739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 230
Target Start/End: Complemental strand, 14675692 - 14675660
Alignment:
Q  198 ggggtaaaccgaaattctctcaaattacagggg 230  Q
    |||||||||| ||||||||||||||||||||||    
T  14675692 ggggtaaaccaaaattctctcaaattacagggg 14675660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 15721012 - 15721076
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| | ||||||||||||||   ||||||||||| |||| | |||||||||| |||||||    
T  15721012 tgtaatttgatgatttttggttttggaccttcatgaattttgacagcacaaaatcgaagatatga 15721076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 20089311 - 20089275
Alignment:
Q  196 agggggtaaaccgaaattctctcaaattacaggggac 232  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  20089311 agggggttaaccgaaattttctcaaattacaggggac 20089275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 92 - 212
Target Start/End: Complemental strand, 13555932 - 13555800
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg------------accgaa 179  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||            ||||||    
T  13555932 ttgtttagatttcaaccctgtaattcaaagatttttggttttggtccttcatgaattatgactgtacaaaatcgatgatatggcatagggataaaccgaa 13555833  T
Q  180 atattgatgatatggtagggggtaaaccgaaat 212  Q
    |||||||||||||||||||||||||||||||||    
T  13555832 atattgatgatatggtagggggtaaaccgaaat 13555800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 13555807 - 13555743
Alignment:
Q  174 accgaaatattgatgatatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  13555807 accgaaatattgatgatatggtagggggtaaaccgaaattctctcaaattacaagggacaaaagt 13555743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 238
Target Start/End: Original strand, 8809943 - 8810100
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgaccg-----------aaa 180  Q
    ||||||||||| ||| | | |||||| ||||||||| |||||||  ||||||||||| | | ||||||||||| |||||||||| |           |||    
T  8809943 ttgtttagatttcaatcttataatttgaagatttttagttttgaaccttcatgaattttaattgtacaaaatcaatgatatgacagggggtaacctgaaa 8810042  T
Q  181 tattgatgatatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||| ||||| ||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  8810043 tatcgatgacatgatagggggtaaaccgaaattttctcaaattacacgggacgaaagt 8810100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 9780599 - 9780517
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||   ||||||||||| |||||||| |||||||||||||||    
T  9780599 ttgtttagattacaaccatgtaatttgaagattatttggttttggaccttcatgaattttgactgtagaaaatcgatgatatg 9780517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 5283685 - 5283810
Alignment:
Q  112 taatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg-----------accgaaatattgatgatatggtagggg 200  Q
    |||||| |||||||||||||||||  ||||||||||| ||||| ||||||||||||||||||           | |||||||| |||||||| | |||||    
T  5283685 taatttgaagatttttggttttgaaccttcatgaattttgactctacaaaatcgatgatatggtagagggtaaatcgaaatatcgatgatattgcagggg 5283784  T
Q  201 gtaaaccgaaattctctcaaattaca 226  Q
    ||||||||||||||  ||||||||||    
T  5283785 gtaaaccgaaattccttcaaattaca 5283810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 32682475 - 32682401
Alignment:
Q  99 gattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||| || |||||||| ||| ||||||||||||   ||||||||||| ||||||||||||||||||||||||    
T  32682475 gattccatccttgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatg 32682401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 25244652 - 25244588
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| ||| ||||||||||||   ||||||||||| |||||||||||||||||||||||||    
T  25244652 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatga 25244588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 3652353 - 3652416
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  3652353 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 3652416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 23091928 - 23091845
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaaga-tttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    ||||||||||||||||| |||||||| |||| ||||| |||||||  |||||| |||| ||||| ||| |||||||||||||||    
T  23091928 ttgtttagattccaaccttgtaatttgaagattttttagttttgaaccttcataaattttgactatacgaaatcgatgatatga 23091845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 30919000 - 30919063
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  30919000 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 30919063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 42056061 - 42056124
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| ||||||||||||   ||||||||||| ||||||||||||||||||||||||    
T  42056061 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatg 42056124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 21744798 - 21744876
Alignment:
Q  96 ttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||||||| ||||||||||||| ||||||||||   |||| | |||| |||| |||||||||||||||||||    
T  21744798 ttagattccaaccatataatttaaagattatttggttttggaccttcttcaattttgaccgtacaaaatcgatgatatg 21744876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 32681990 - 32681928
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||||||||||||||||||| |  ||||||||||| |||| |||||||||||| |||||    
T  32681990 tgtaatttaaagatttttggttttaaaccttcatgaattttgacagtacaaaatcgaagatat 32681928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 39152039 - 39152101
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| ||||||||| |||||||  ||||||||||| |||| ||||||||||||||||||    
T  39152039 tgtaatttgaagattttttgttttgaatcttcatgaattttgaccgtacaaaatcgatgatat 39152101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 18165200 - 18165119
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| || || || |||||||| ||||||| ||||||||   ||||||||||| |||||||||||||| |||||||||    
T  18165200 ttgtttagttttcatccttgtaatttgaagatttctggttttggaccttcatgaattttgactgtacaaaatagatgatatg 18165119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 23184839 - 23184903
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| |||||||||||||| ||  ||||||||||| ||||||||||||||||| ||||||||    
T  23184839 tgtaatttgaagatttttggtttggac-cttcatgaattttgactgtacaaaatcgaagatatgac 23184903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 50773371 - 50773436
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||||||||||||||||   ||||||||||| |||| |||||||||||| ||||||||    
T  50773371 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatgac 50773436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 16734144 - 16734228
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||||||||||||||| |||||||| |||||| | |||||||   |||||||||||| ||||| ||| ||||| ||||||||||    
T  16734144 ttgtttagattccaaccctgtaatttgaagattctatggttttagagcttcatgaattttgactctacgaaatcaatgatatgac 16734228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 49277931 - 49277851
Alignment:
Q  93 tgtttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||||||||||| |||||||| |||||| |||||||||||  |||||| |||| ||||  |||||||| ||||||||    
T  49277931 tgtttagattccaaccttgtaatttgaagattatttggttttgaaccttcataaattttgacgatacaaaattgatgatat 49277851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 14121539 - 14121476
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| ||||||||||||    |||||||||| ||||||||||||||||||||||||    
T  14121539 tgtaatttgaagttttttggttttggactttcatgaattttgactgtacaaaatcgatgatatg 14121476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 17696357 - 17696294
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| |||| |||||||||||| ||||||    
T  17696357 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatg 17696294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 2032695 - 2032645
Alignment:
Q  123 tttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||||   ||||||||||| ||||||||||||||||||||||||    
T  2032695 tttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatg 2032645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 7913405 - 7913343
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| ||||||||||||||||| |||||    
T  7913405 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 7913343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 21507908 - 21507970
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| ||||||||||||||||| |||||    
T  21507908 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 21507970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 22854046 - 22854108
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| ||||||||||||||||| |||||    
T  22854046 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 22854108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 18510065 - 18510130
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||| || ||||||||| ||||||   ||||||||||| ||||||||||||||||| ||||||||    
T  18510065 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatgac 18510130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 30409398 - 30409333
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||| ||||||||||||   ||||||||||| | |||||| |||||||||||||||||    
T  30409398 tgtaatttgaagttttttggttttggaccttcatgaattttaactgtataaaatcgatgatatgac 30409333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 39133169 - 39133230
Alignment:
Q  112 taatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||| ||||||||||||||||   ||||||||||| |||| |||||||||||| ||||||    
T  39133169 taatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatg 39133230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 46088158 - 46088195
Alignment:
Q  138 cttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  46088158 cttcatgaattttgactgtacaaaatcgatgatatgac 46088195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 9780510 - 9780470
Alignment:
Q  198 ggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  9780510 ggggtaaaccgaaattatctcaaattacaggggatgaaagt 9780470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 29172800 - 29172724
Alignment:
Q  98 agattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||| |||||||| |||||| |||||||||||  |||| ||| || || ||||||||||| |||||||||    
T  29172800 agattccaaccttgtaatttgaagattctttggttttgaaccttcgtgacttttggctgtacaaaatagatgatatg 29172724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 49166728 - 49166792
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| | ||||||||||||||   ||||||||||| |||| |||||||||||| |||||||    
T  49166728 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatga 49166792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 134
Target Start/End: Original strand, 25786231 - 25786274
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatt-tttggttttg 134  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||    
T  25786231 ttgtttagattccaaccctgtaatttaaagattatttggttttg 25786274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 49296294 - 49296231
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||| || ||||||||| ||||||   ||||||||||| ||||||||||||||||| ||||||    
T  49296294 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatg 49296231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 52194457 - 52194394
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| |||||||||||||  ||| ||||||| |||| |||||||||| ||||||||    
T  52194457 tgtaatttgaagttttttggttttgaacctttatgaattttgaccgtacaaaatcaatgatatg 52194394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 232
Target Start/End: Complemental strand, 16876051 - 16876021
Alignment:
Q  202 taaaccgaaattctctcaaattacaggggac 232  Q
    |||||||||||||||||||||||||||||||    
T  16876051 taaaccgaaattctctcaaattacaggggac 16876021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 41325505 - 41325443
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   |||||||||||  |||||||||||||||| |||||    
T  41325505 tgtaatttgaatatttttggttttggaccttcatgaatttcgactgtacaaaatcgaagatat 41325443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 42161376 - 42161426
Alignment:
Q  177 gaaatattgatgatatggtagg-gggtaaaccgaaattctctcaaattaca 226  Q
    ||||||| |||||||||| ||| ||||||| ||||||||||||||||||||    
T  42161376 gaaatatcgatgatatggcaggagggtaaatcgaaattctctcaaattaca 42161426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 29172732 - 29172691
Alignment:
Q  185 gatgatatggtagggggtaaaccgaaattctctcaaattaca 226  Q
    |||||||||| |||||||||||| |||||| |||||||||||    
T  29172732 gatgatatggaagggggtaaaccaaaattcgctcaaattaca 29172691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 5514648 - 5514592
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    |||||||| ||||||||||||||||   ||| ||||||| |||||| ||||||||||    
T  5514648 tgtaatttgaagatttttggttttggacctttatgaattttgactgcacaaaatcga 5514592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 238
Target Start/End: Original strand, 42223089 - 42223247
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg------------accgaa 179  Q
    ||||||||||| ||||| |||||||| |||| |||||||||||   ||||||||||| ||||||||||||||||||||||||            ||||||    
T  42223089 ttgtttagatttcaaccctgtaatttgaagaattttggttttggatcttcatgaattttgactgtacaaaatcgatgatatggtagggtggtaaaccgaa 42223188  T
Q  180 atattgatgatatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||||||||||||||  |||||||||||||||||||| |||||||||| ||| |||||||    
T  42223189 atattgatgatatgtcagggggtaaaccgaaattctttcaaattacaaggggcgaaagt 42223247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 29949627 - 29949703
Alignment:
Q  99 gattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||||| || |||||||| ||| ||||||||||||   ||||||||||| ||||||||||||||||||||||||||    
T  29949627 gattccatccttgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatgac 29949703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 18756642 - 18756579
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||||||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  18756642 tgtaatttaaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 18756579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 16590512 - 16590593
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttt-tggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    ||||||||||||||||  |||||||| |||||||| ||||||||   ||||||||||| ||| |||||||||||||||||||    
T  16590512 ttgtttagattccaactctgtaatttgaagattttttggttttgcaccttcatgaattttgattgtacaaaatcgatgatat 16590593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 41906055 - 41906136
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||| ||||||| |||||||| ||||| |||||||||    ||||||||||| ||||||||||||||||| ||||||    
T  41906055 ttgtttagaatccaaccctgtaatttgaagatatttggttttcgaccttcatgaattttgactgtacaaaatcgacgatatg 41906136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 35791059 - 35791141
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttt-tggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||||||||| |||||||| || ||| | || |||||   ||||||||||| ||||||||||||||||||||||||    
T  35791059 ttgtttagattccaaccctgtaatttgaatattctctgtttttggaccttcatgaattttgactgtacaaaatcgatgatatg 35791141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 7008066 - 7008001
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||| ||||||||||||   ||||||||||| |||||||| |||||||||||||||||    
T  7008066 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtataaaatcgatgatatgac 7008001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 36525358 - 36525423
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||| ||||||||||||   ||||||||||| |||||||||||||| |||||||||||    
T  36525358 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaattgatgatatgac 36525423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 2526434 - 2526497
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| ||||||||||||   ||||||||||| ||||| ||||||||||||||||||    
T  2526434 tgtaatttgaagttttttggttttggaccttcatgaattttgactatacaaaatcgatgatatg 2526497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 7318174 - 7318237
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| |||| |||||||||||| ||||||    
T  7318174 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgacgatatg 7318237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 17886708 - 17886645
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| ||||||||||||   ||||||||| | ||||||||||||||||||||||||    
T  17886708 tgtaatttgaagttttttggttttggatcttcatgaactttgactgtacaaaatcgatgatatg 17886645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 31989421 - 31989500
Alignment:
Q  95 tttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||| || |||||||| |||| | |||||||||    |||||||||||||||| |||||||||||||||||||    
T  31989421 tttagattccatccttgtaatttgaagaatctttggttttcgaccttcatgaattatgaccgtacaaaatcgatgatatg 31989500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 34831574 - 34831637
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||| | ||||||    
T  34831574 tgtaatttgaagatttttggttttggcccttcatgaattttgactgtacaaaatcaaagatatg 34831637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 38127845 - 38127908
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| |||||||||||||| || ||||||    
T  38127845 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaattgaagatatg 38127908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 1975775 - 1975713
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| ||||||||||||||||| |||||    
T  1975775 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 1975713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 18048899 - 18048961
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| ||||||||||||||||| |||||    
T  18048899 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 18048961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 42794094 - 42794156
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| ||||||||||||||||| |||||    
T  42794094 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 42794156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 43830795 - 43830733
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| ||||||||||||||||| |||||    
T  43830795 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 43830733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 11915153 - 11915210
Alignment:
Q  182 attgatgatatggtaggggg-taaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    |||||||||||||||||| | |||||| |||||||||||||||||| ||| |||||||    
T  11915153 attgatgatatggtagggtgataaaccaaaattctctcaaattacacggggcgaaagt 11915210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 35791133 - 35791174
Alignment:
Q  185 gatgatatggtagggggtaaaccgaaattctctcaaattaca 226  Q
    |||||||||| ||||||||||||||||| |||||||||||||    
T  35791133 gatgatatggcagggggtaaaccgaaatactctcaaattaca 35791174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 15544006 - 15543942
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| | ||||||||||||||   ||||||||||| |||| |||||||||||| |||||||    
T  15544006 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatga 15543942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 19253482 - 19253538
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    ||||| || ||||||||||||||||   ||||||||||| |||||||||||||||||    
T  19253482 tgtaagttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcga 19253538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 22846272 - 22846216
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    |||||||||||||| ||||||||||   |||| |||||| |||||||||||||||||    
T  22846272 tgtaatttaaagatctttggttttggaccttcttgaattttgactgtacaaaatcga 22846216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 31260928 - 31260865
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    ||||||||||||||||  ||||||| | |||||| |||| |||||||||| ||||||||||||||    
T  31260928 tgtaatttaaagatttacggttttggtccttcataaatt-tgactgtacagaatcgatgatatga 31260865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 38949939 - 38950003
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| | ||||||||||||||   ||||||||||| |||| |||||||||||| |||||||    
T  38949939 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatga 38950003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 39373076 - 39373132
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    |||||||| ||||||||||||||||   ||||||||||| |||||| ||||||||||    
T  39373076 tgtaatttgaagatttttggttttggaccttcatgaattttgactggacaaaatcga 39373132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 25104028 - 25103965
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| |||| |||||||||| | ||||||    
T  25104028 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcaaagatatg 25103965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 26498748 - 26498709
Alignment:
Q  185 gatgatatggtagggggtaaaccgaaattctctcaaatta 224  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  26498748 gatgatatggcagggggtaaaccgaaattttctcaaatta 26498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 26498803 - 26498740
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| ||||||||||||   ||||||||||| |||||  |||||||||||||||||    
T  26498803 tgtaatttgaagttttttggttttggaccttcatgaattttgactagacaaaatcgatgatatg 26498740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 874436 - 874498
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || ||||||||||||    ||||||||||| ||||||||||||||||| |||||    
T  874436 tgtaatttgaatatttttggttttagaccttcatgaattttgactgtacaaaatcgaagatat 874498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 230
Target Start/End: Complemental strand, 7007938 - 7007904
Alignment:
Q  196 agggggtaaaccgaaattctctcaaattacagggg 230  Q
    |||||||||||||||||| ||||||||||||||||    
T  7007938 agggggtaaaccgaaattttctcaaattacagggg 7007904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 29883999 - 29884061
Alignment:
Q  111 gtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||| ||| |||||||||| |   ||||||||||| || |||||||||||||||||||||    
T  29883999 gtaatttgaagttttttggtttaggaccttcatgaattttggctgtacaaaatcgatgatatg 29884061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 9419792 - 9419727
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||| || ||||||||| ||||||    |||||||||| ||||||||||||||||| ||||||||    
T  9419792 tgtaacttgaagattttttgttttggactttcatgaattttgactgtacaaaatcgaagatatgac 9419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 10071423 - 10071358
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||||||| ||||||||   ||| ||||||| |||| |||||||||||| ||||||||    
T  10071423 tgtaatttgaagatttatggttttggacctttatgaattttgacagtacaaaatcgacgatatgac 10071358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 16590586 - 16590623
Alignment:
Q  185 gatgatatggtagggggtaaaccgaaattctctcaaat 222  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  16590586 gatgatatagtagggggtaaatcgaaattctctcaaat 16590623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 33218618 - 33218565
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaat 163  Q
    |||||||| ||||||||||||||||   ||||||||||| |||| |||||||||    
T  33218618 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaat 33218565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 33315226 - 33315287
Alignment:
Q  112 taatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||| ||||||| ||||||||   ||||||| ||| |||| |||||||||||||||||||    
T  33315226 taatttgaagatttatggttttggaccttcatggattttgacggtacaaaatcgatgatatg 33315287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 15580661 - 15580597
Alignment:
Q  110 tgtaatttaaagatttttgg-ttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||| | |||||   ||||||||||| |||| |||||||||||||||||||    
T  15580661 tgtaatttgaagattttttgattttggaccttcatgaattttgaccgtacaaaatcgatgatatg 15580597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 16204542 - 16204506
Alignment:
Q  188 gatatggtagggggtaaaccgaaattctctcaaatta 224  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  16204542 gatatggcagggggtaaaccgaaattttctcaaatta 16204506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 23381271 - 23381307
Alignment:
Q  139 ttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||||| |||||| |||||||||||||||||||    
T  23381271 ttcatgaattttgactgcacaaaatcgatgatatgac 23381307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 230
Target Start/End: Original strand, 17030593 - 17030742
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg----------acc-gaaa 180  Q
    ||||||||||||||||| |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||| ||||||||          ||| ||||    
T  17030593 ttgtttagattccaaccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcaatgatatgtcaggtggtaacctgaaa 17030692  T
Q  181 tattgatgatatggtagggggtaaaccgaaattctctcaaattacagggg 230  Q
    ||| |||||||||| ||| |||||||| |||||||||||| |||||||||    
T  17030693 tatcgatgatatggcaggaggtaaaccaaaattctctcaatttacagggg 17030742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 238
Target Start/End: Complemental strand, 25125067 - 25124910
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg-----------accgaaa 180  Q
    ||||||||||| || || | |||||| |||||||||||||||    ||||||||||| ||||||||||||||||||||||||           || ||||    
T  25125067 ttgtttagatttcatccctataatttgaagatttttggtttttgaccttcatgaattttgactgtacaaaatcgatgatatggaagggggtaaactgaaa 25124968  T
Q  181 tattgatgatatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||| |||||||||| ||||||||||| ||||||||| ||||||||| ||| |||||||    
T  25124967 tatcgatgatatggcagggggtaaactgaaattctcccaaattacaaggggcgaaagt 25124910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 25158853 - 25158934
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||||||||| |||||||| || ||| |||||||||    |||||||||| ||||||||||||||||||||||||    
T  25158853 ttgtttagattccaaccctgtaatttgaatattcttggttttggacattcatgaattttgactgtacaaaatcgatgatatg 25158934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 31293760 - 31293682
Alignment:
Q  95 tttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||  || |||||||| ||| ||||||||||||   ||||||||||| ||||||||||||||||||||||||    
T  31293760 tttagattccgtccttgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatg 31293682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 7308179 - 7308223
Alignment:
Q  186 atgatatggtagggggtaaaccgaaattctctcaaattacagggg 230  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  7308179 atgatatggcagggggtaaaccgaaattctctcaaattacagggg 7308223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 28735522 - 28735590
Alignment:
Q  107 ccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||||||||| ||||||||||||||||   ||||||||||| || |||||||||||||| ||||||||    
T  28735522 ccatgtaatttgaagatttttggttttggaccttcatgaattttggctgtacaaaatcgaagatatgac 28735590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 13041656 - 13041593
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  13041656 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 13041593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 13049733 - 13049670
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  13049733 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 13049670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 52839592 - 52839529
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  52839592 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 52839529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 43426365 - 43426419
Alignment:
Q  177 gaaatattgatgatatggtagggg-gtaaaccgaaattctctcaaattacagggg 230  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  43426365 gaaatatcgatgatatggcaggggggtaaaccgaaattctctcaaattacagggg 43426419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 19111233 - 19111168
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||||||||||||||||   ||||||||||| |||||||| |||||||| ||||||||    
T  19111233 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtataaaatcgaagatatgac 19111168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 7272642 - 7272705
Alignment:
Q  110 tgtaatttaaagatttttggtttt-gatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  7272642 tgtaatttgaagttttttggttttagat-cttcatgaattgtgactgtacaaaatcgatgatatg 7272705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 17582235 - 17582307
Alignment:
Q  100 attccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    ||||||||| |||||||||||||||||| |||||||  ||||||||||| |||   ||||||||| |||||||    
T  17582235 attccaaccctgtaatttaaagatttttcgttttgaaccttcatgaattttgaaattacaaaatcaatgatat 17582307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 2985790 - 2985727
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| |||||||||||    ||||||||||| ||||||||||||||||||||||||    
T  2985790 tgtaatttgaagttttttggttttagaccttcatgaattttgactgtacaaaatcgatgatatg 2985727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 22817964 - 22818027
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||| ||||||||||| ||||||    
T  22817964 tgtaatttgaagatttttggttttggaccttcatgaattttgactatacaaaatcgaagatatg 22818027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 45151706 - 45151769
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||| | ||| |||||||||||| | ||||||||||| | ||||||||||||||||||||||    
T  45151706 tgtaatatgaagttttttggttttggtccttcatgaattttaactgtacaaaatcgatgatatg 45151769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 13439857 - 13439795
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| ||||||||||||||||   ||||||||||| ||| ||||||||||||| |||||    
T  13439857 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatat 13439795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 17582472 - 17582533
Alignment:
Q  177 gaaatattgatgatatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||||||| ||| |||||| ||| |||||||||||| |||||||||||||| ||| |||||||    
T  17582472 gaaatatcgattatatggcaggaggtaaaccgaaaatctctcaaattacaaggggcgaaagt 17582533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 32721800 - 32721735
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||| || ||||||||| ||||||   ||||||||||| ||||||||||||||||| ||||||||    
T  32721800 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatgac 32721735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 18359503 - 18359427
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgat 167  Q
    ||||||||||| ||||| ||||||||||||||| ||||| |||    ||||||||||| |||||||| |||||||||    
T  18359503 ttgtttagatttcaaccttgtaatttaaagattctttggatttagaccttcatgaattttgactgtaaaaaatcgat 18359427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 52962313 - 52962377
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| ||  ||||||||||||   ||||||||||| ||||||||||||||||| |||||||    
T  52962313 tgtaatttgaaattttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatga 52962377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 5572246 - 5572183
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| |||||||||| |||||   ||||||||||| |||| |||||||||||| ||||||    
T  5572246 tgtaatttgaagatttttgattttggaccttcatgaattttgacagtacaaaatcgaagatatg 5572183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 14870223 - 14870160
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||| ||||||   ||| ||||||| ||||||||||||||||| ||||||    
T  14870223 tgtaatttgaagatttttcgttttggacctttatgaattttgactgtacaaaatcgaagatatg 14870160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 26770213 - 26770150
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||| ||||||||   ||||||||||| |||| |||||||||||| ||||||    
T  26770213 tgtaatttgaagatttctggttttggaccttcatgaattttgacagtacaaaatcgacgatatg 26770150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 31073950 - 31073887
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||| |||||||||| || ||||||    
T  31073950 tgtaatttgaagatttttggttttggaccttcatgaattttgaatgtacaaaattgaagatatg 31073887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 31293690 - 31293651
Alignment:
Q  185 gatgatatggtagggggtaaaccgaaattctctcaaatta 224  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  31293690 gatgatatgggagggggtaaaccgaaattttctcaaatta 31293651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 173
Target Start/End: Original strand, 34314781 - 34314816
Alignment:
Q  138 cttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||| ||||||||||||||||||||||||    
T  34314781 cttcatgaattttgactgtacaaaatcgatgatatg 34314816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 300250 - 300312
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| | ||||||||||||||   ||||||||||| |||| |||||||||||| |||||    
T  300250 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatat 300312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 7226166 - 7226216
Alignment:
Q  123 tttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||||   ||||||||||| ||| ||||||||||||||||||||    
T  7226166 tttttggttttggaccttcatgaattttgaatgtacaaaatcgatgatatg 7226216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 14004557 - 14004495
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || ||||||||||||||   |||||||||| |||| |||||||||||| |||||    
T  14004557 tgtaatttgaaaatttttggttttgaactttcatgaattttgacagtacaaaatcgaagatat 14004495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 14220661 - 14220599
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   |||||| |||| ||||||||||||||||| |||||    
T  14220661 tgtaattttaatatttttggttttggaccttcataaattttgactgtacaaaatcgaagatat 14220599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 14224888 - 14224826
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   |||||| |||| ||||||||||||||||| |||||    
T  14224888 tgtaattttaatatttttggttttggaccttcataaattttgactgtacaaaatcgaagatat 14224826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 26932506 - 26932440
Alignment:
Q  107 ccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||| |||||||||||||| ||||||||   ||| ||||||| |||| |||| ||||||||||||||    
T  26932506 ccatctaatttaaagatttctggttttggaccttgatgaattttgaccgtacgaaatcgatgatatg 26932440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 172
Target Start/End: Complemental strand, 28298221 - 28298187
Alignment:
Q  138 cttcatgaattatgactgtacaaaatcgatgatat 172  Q
    ||||||||||| |||||||||||||||||||||||    
T  28298221 cttcatgaattttgactgtacaaaatcgatgatat 28298187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 7013360 - 7013307
Alignment:
Q  185 gatgatatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||||| |||| |||||||||| | |||||||||||||||||| ||| |||||||    
T  7013360 gatgacatggcagggggtaaatctaaattctctcaaattacatggggcgaaagt 7013307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 7272697 - 7272742
Alignment:
Q  185 gatgatatggtagggggtaaaccgaaattctctcaaattacagggg 230  Q
    |||||||||| ||||||||||| ||||||  |||||||||||||||    
T  7272697 gatgatatggcagggggtaaactgaaatttcctcaaattacagggg 7272742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 7308106 - 7308186
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||| ||||||||| || | ||| |||||||| |||||||   ||||||||||| |||| |||||||||| ||||||||    
T  7308106 ttgtttaaattccaaccctgaagtttgaagatttt-ggttttggaccttcatgaattttgacagtacaaaatcaatgatatg 7308186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 3505293 - 3505237
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    |||||||||||||||||||||||||   ||| ||||||| || | ||||||||||||    
T  3505293 tgtaatttaaagatttttggttttggacctttatgaattttgtccgtacaaaatcga 3505237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 16897381 - 16897325
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    |||||||| |||||||||||||||    ||| ||||||| |||||||||||||||||    
T  16897381 tgtaatttgaagatttttggtttttgacctttatgaattttgactgtacaaaatcga 16897325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 18359413 - 18359373
Alignment:
Q  198 ggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||||||| |||||||||||||||||||||| |||| |||||    
T  18359413 ggggtaatccgaaattctctcaaattacagcggactaaagt 18359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 9235351 - 9235434
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||||||||| |||||||||||||| |||| |||||||||||   ||||||||||| ||||||||||||||||||||||||||    
T  9235351 ttgtttagatttcaaccatgtaatttgaagaattttggttttggaccttcatgaattttgactgtacaaaatcgatgatatgac 9235434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 9305699 - 9305634
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||    
T  9305699 tgtaatttgaagatttttggttttgaaccttcatgaattttgactgtacaaaatcgaagatatgac 9305634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 2873531 - 2873596
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||||    
T  2873531 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatgac 2873596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 23245571 - 23245713
Alignment:
Q  108 catgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg------------accgaaatattgatgatatggt 195  Q
    |||||||||| ||||||||| ||||||    |||||||||| ||||||||||||||||||||||||            ||| ||| |||||||||||||     
T  23245571 catgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgatagggtggtaaaccaaaacattgatgatatggc 23245670  T
Q  196 agggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    | |||||||| ||||||| |||||||||||| ||| |||||||    
T  23245671 aaggggtaaaacgaaattatctcaaattacatggggcgaaagt 23245713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 226
Target Start/End: Original strand, 24528805 - 24528948
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggtttt-gatgcttcatgaattatgactgtacaaaatcgatgatatgaccg-----------aa 179  Q
    |||||||||||||  ||||||||||| ||  ||||||||||| |||  |||||||||| ||||||||||||||||||||||| || |           ||    
T  24528805 ttgtttagattcc--ccatgtaatttgaatctttttggttttagatt-ttcatgaattttgactgtacaaaatcgatgatattacagggggtaaactgaa 24528901  T
Q  180 atattgatgatatggtagggggtaaaccgaaattctctcaaattaca 226  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||||    
T  24528902 atatcgatgatatggtagggggtaaaccgagattctctaaaattaca 24528948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 238
Target Start/End: Original strand, 23288916 - 23289072
Alignment:
Q  95 tttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg----------accgaaatatt 184  Q
    |||||||| ||| | |||||||| |||||||||||||||    ||||||||||  |||| |||||||||| |||||||           ||||||||||     
T  23288916 tttagatttcaatcctgtaatttgaagatttttggttttagaacttcatgaatattgaccgtacaaaatcaatgatatagcgagggtgaaccgaaatatc 23289015  T
Q  185 gatgatatggtaggggg---taaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    |||||||||  ||||||   ||||| |||||||||||||||||||||||||||||||    
T  23289016 gatgatatgacaggggggattaaacagaaattctctcaaattacaggggacgaaagt 23289072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 24768621 - 24768684
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| |||||||||||||||||  ||| ||||||| ||||||||||||||||| ||||||    
T  24768621 tgtaatttgaagatttttggttttgaaccttaatgaattttgactgtacaaaatcgaagatatg 24768684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 29346087 - 29346150
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  29346087 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 29346150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 31974983 - 31974920
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||| ||||||||||||||||||  ||||||||||| |||||||||||||| || ||||||    
T  31974983 tgtaattcaaagatttttggttttgaaccttcatgaattttgactgtacaaaattgaagatatg 31974920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 32684855 - 32684792
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  32684855 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 32684792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 5566776 - 5566711
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||||||| ||||||||   ||||||||||| ||||||||||||||||| ||||||||    
T  5566776 tgtaatttgaagatttctggttttggaccttcatgaattttgactgtacaaaatcgacgatatgac 5566711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 23389101 - 23389166
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||||||||||||||||   |||||| |||| ||||||||||||||||| ||||||||    
T  23389101 tgtaatttgaagatttttggttttggaccttcataaattttgactgtacaaaatcgaagatatgac 23389166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 41509674 - 41509609
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||||||||||||||||   ||||||||||| ||| ||||||||||||| ||||||||    
T  41509674 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatatgac 41509609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 24375887 - 24375831
Alignment:
Q  182 attgatgatatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||||||||||||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  24375887 attgatgatatggcagggggtaaactgaaatttgctcaaattacaagggacgaaagt 24375831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 37545184 - 37545128
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    |||||||| ||||||||||||||||   ||||||||||| |||||||||||||||||    
T  37545184 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcga 37545128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 13572622 - 13572685
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||||||||||||||||||||   ||||||||||| |||| ||| |||||||| ||||||    
T  13572622 tgtaatttaaagatttttggttttggaccttcatgaattttgacagtaaaaaatcgacgatatg 13572685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 24331621 - 24331558
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||| ||||||||||||| ||||||    
T  24331621 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatatg 24331558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 30872688 - 30872625
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| ||||||||||||   ||||||||||| |||||||||||||||||| |||||    
T  30872688 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgataatatg 30872625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 38703890 - 38703827
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| | ||||||||||||||| ||||||    
T  38703890 tgtaatttgaagatttttggttttggaccttcatgaatttttactgtacaaaatcgaagatatg 38703827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 226
Target Start/End: Original strand, 14698097 - 14698242
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg----------acc-gaaa 180  Q
    ||||||| ||||||| | |||||||| |||||||||  ||||||  ||| ||||||| |||| |||||||||| ||||||||          ||| ||||    
T  14698097 ttgtttaaattccaatcttgtaatttgaagattttttattttgaacctttatgaattttgacagtacaaaatcaatgatatggcaaggggtaacctgaaa 14698196  T
Q  181 tattgatgatatggtagggggtaaaccgaaattctctcaaattaca 226  Q
    ||| |||||||||| |||||| |||| |||||| ||||||||||||    
T  14698197 tatcgatgatatggcagggggcaaactgaaattttctcaaattaca 14698242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 18029746 - 18029788
Alignment:
Q  182 attgatgatatggtagggggtaaaccgaaattctctcaaatta 224  Q
    ||||||||||||| |||||||||||||||||| ||||||||||    
T  18029746 attgatgatatggcagggggtaaaccgaaattttctcaaatta 18029788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 29211934 - 29212015
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||| || |||||||| ||||||| ||||||||   ||||||||||| ||||| ||||||||  ||||||||    
T  29211934 ttgtttagtttccatccttgtaatttgaagatttctggttttggaccttcatgaattttgactatacaaaatatatgatatg 29212015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 30221855 - 30221916
Alignment:
Q  112 taatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||| ||| |||||||||||||  ||||||||||| |||| ||||||||||||| |||||    
T  30221855 taatttgaagttttttggttttgaaccttcatgaattttgaccgtacaaaatcgataatatg 30221916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 11830258 - 11830322
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| | ||||||||||||||   ||||||||||| |||| |||||||||||| |||||||    
T  11830258 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatga 11830322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 224
Target Start/End: Original strand, 32393451 - 32393487
Alignment:
Q  188 gatatggtagggggtaaaccgaaattctctcaaatta 224  Q
    |||||||||||||||||||||||||| ||||||||||    
T  32393451 gatatggtagggggtaaaccgaaattttctcaaatta 32393487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 34227409 - 34227465
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    |||||||| |||||||||||||||    ||||||||||| |||||||||||||||||    
T  34227409 tgtaatttgaagatttttggttttagaccttcatgaattttgactgtacaaaatcga 34227465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 173
Target Start/End: Complemental strand, 28786525 - 28786490
Alignment:
Q  138 cttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||| ||||||||||||||||||||||||    
T  28786525 cttcatgaattttgactgtacaaaatcgatgatatg 28786490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 5600183 - 5600261
Alignment:
Q  95 tttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||| | |||||||||  ||||| ||||||   ||| ||||||| |||||||||||||||||| |||||    
T  5600183 tttagatttcaaccgtataatttaaaattttttagttttgtacctttatgaattttgactgtacaaaatcgataatatg 5600261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 5640437 - 5640359
Alignment:
Q  95 tttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||| | |||||||||  ||||| ||||||   ||| ||||||| |||||||||||||||||| |||||    
T  5640437 tttagatttcaaccgtataatttaaaattttttagttttgtacctttatgaattttgactgtacaaaatcgataatatg 5640359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 5642791 - 5642853
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| ||| ||||||||||||| |||||    
T  5642791 tgtaatttgaatatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatat 5642853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 5644732 - 5644794
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| ||| ||||||||||||| |||||    
T  5644732 tgtaatttgaatatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatat 5644794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 10329053 - 10328991
Alignment:
Q  112 taatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||| |||| || ||||||||   ||||||||||||| |||||||||||| ||||||||||    
T  10329053 taatttgaagaattatggttttggaccttcatgaattataactgtacaaaattgatgatatga 10328991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 15935627 - 15935585
Alignment:
Q  182 attgatgatatggtagggggtaaaccgaaattctctcaaatta 224  Q
    ||||| ||||||||||||||||||||||||||  |||||||||    
T  15935627 attgaagatatggtagggggtaaaccgaaatttgctcaaatta 15935585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 38711915 - 38711853
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| ||||||| ||||||||| |||||    
T  38711915 tgtaatttgaatatttttggttttggaccttcatgaattttgactgttcaaaatcgaagatat 38711853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 8442208 - 8442147
Alignment:
Q  112 taatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||| ||| ||||||||||||   ||||||||||| ||| |||| |||||||||||||||    
T  8442208 taatttgaagttttttggttttggaccttcatgaattttgagtgtataaaatcgatgatatg 8442147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 13174933 - 13175014
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||  || ||||||||  |||||| |||||||||   |||||||||| |||| |||||||||||| ||||||    
T  13174933 ttgtttagtttccgtccttgtaatttgcagatttctggttttgaacattcatgaattttgaccgtacaaaatcgacgatatg 13175014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 12478656 - 12478720
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| | ||||||||||||||   ||||||||||| |||| |||||||||| | |||||||    
T  12478656 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcaaagatatga 12478720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 24754628 - 24754660
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatt 124  Q
    |||||||||||||||||||||||||| ||||||    
T  24754628 ttgtttagattccaaccatgtaatttgaagatt 24754660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 25653997 - 25653933
Alignment:
Q  110 tgtaatttaaagatttttggttttg-atgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| | |||||||||||||| |  ||||||||||| |||| |||||||||||| ||||||    
T  25653997 tgtaatttgatgatttttggttttggacccttcatgaattttgacagtacaaaatcgaagatatg 25653933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 38703832 - 38703796
Alignment:
Q  188 gatatggtagggggtaaaccgaaattctctcaaatta 224  Q
    ||||||||||||||||||||||||||  |||||||||    
T  38703832 gatatggtagggggtaaaccgaaatttgctcaaatta 38703796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 33864115 - 33864196
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||  ||||||||||| |||||||||||||||||||||||    
T  33864115 ttgtttagattccaaccctgtaatttgaagattctttggttttgaatcttcatgaattttgactgtacaaaatcgatgatat 33864196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 33916807 - 33916726
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||  ||||||||||| |||||||||||||||||||||||    
T  33916807 ttgtttagattccaaccctgtaatttgaagattctttggttttgaatcttcatgaattttgactgtacaaaatcgatgatat 33916726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 25060082 - 25059945
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg----------acc-gaaatattgatgatatggtagg 198  Q
    |||||||| ||||||||| |||||||  ||||||||||| ||| ||||||||||| ||||||||          ||| ||||||| |||||||||  |||    
T  25060082 tgtaatttgaagatttttagttttgaaccttcatgaattttgattgtacaaaatcaatgatatggcagggggtaacctgaaatatcgatgatatgacagg 25059983  T
Q  199 gggtaaaccgaaattctctcaaattacaggggacgaaa 236  Q
    |||||||||||||| ||||||||||||| ||| |||||    
T  25059982 gggtaaaccgaaatgctctcaaattacaaggggcgaaa 25059945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 21770837 - 21770900
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  21770837 tgtaatttgaagatttttggttttgtgccttcatgaattttgactgtacaaaatcgaagatatg 21770900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 22387468 - 22387405
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||||||||||||||||||||   ||||| ||||| ||||||||||||||||| ||||||    
T  22387468 tgtaatttaaagatttttggttttggaccttcaagaattttgactgtacaaaatcgaagatatg 22387405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 26190813 - 26190876
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  26190813 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 26190876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 44228339 - 44228421
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||   ||||||||||| ||||||  |||||| |||||||||    
T  44228339 ttgtttagattacaaccctgtaatttaaagattctttggttttggaccttcatgaattttgactgggcaaaattgatgatatg 44228421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 1701231 - 1701151
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    ||||||||||| ||||| ||||||||||||||||||||||| |   ||||||||||| |||  ||||||| ||||| ||||    
T  1701231 ttgtttagatttcaaccctgtaatttaaagatttttggtttaggaccttcatgaattttgagcgtacaaactcgataatat 1701151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 5469355 - 5469435
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    ||||||||||||||||| | |||||| ||||||||| ||||||   |||||| |||| ||||  |||||||||||||||||    
T  5469355 ttgtttagattccaaccttataatttgaagatttttagttttggatcttcattaattttgaccatacaaaatcgatgatat 5469435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 5932044 - 5932107
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   |||||||||||  |||||||||||||||| ||||||    
T  5932044 tgtaatttgaagatttttggttttggaccttcatgaatttcgactgtacaaaatcgaagatatg 5932107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 9209657 - 9209719
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| ||||||||||||||||| |||||    
T  9209657 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatat 9209719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 13436932 - 13436997
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||||||||| |||||    ||||||||||| ||| ||||||||||||||||||||||    
T  13436932 tgtaatttgaagattttttgttttagaccttcatgaattttgattgtacaaaatcgatgatatgac 13436997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 44078593 - 44078674
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagattt-ttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    ||||||||||||||||| | |||||| ||||| | |||||||| |  ||||||||||| ||| |||| ||||||||||||||    
T  44078593 ttgtttagattccaaccctttaatttgaagatatattggttttcaaccttcatgaattttgattgtataaaatcgatgatat 44078674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 12126197 - 12126273
Alignment:
Q  96 ttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| |||| |||||||| | |||||||  |||||   ||||||||||| ||| |||||||||||||||||||    
T  12126197 ttagattctaaccctgtaatttgacgattttttattttggatcttcatgaattttgattgtacaaaatcgatgatat 12126273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 14910051 - 14909988
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| |||||| |||||   ||||||||||| | ||||||||||||||||||||||    
T  14910051 tgtaatttgaagttttttgcttttggaccttcatgaattttaactgtacaaaatcgatgatatg 14909988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 17890132 - 17890167
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagattttt 127  Q
    ||||||||||||||||| ||||||||||||||||||    
T  17890132 ttgtttagattccaaccctgtaatttaaagattttt 17890167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 17890343 - 17890292
Alignment:
Q  96 ttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaat 147  Q
    ||||||||||||| |||||||| ||||||||| |||||||  ||||||||||    
T  17890343 ttagattccaaccctgtaatttgaagatttttagttttgaaccttcatgaat 17890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 21853817 - 21853758
Alignment:
Q  114 atttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||| ||| ||||||||||||   ||||||||||| ||||| ||||||||||||||||||    
T  21853817 atttgaagttttttggttttggatcttcatgaattttgactatacaaaatcgatgatatg 21853758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 23161908 - 23161971
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| |||||||||| |||||   ||||||||||| |||| |||||||||||| ||||||    
T  23161908 tgtaatttgaagatttttgattttggaccttcatgaattttgacggtacaaaatcgaagatatg 23161971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 41189974 - 41190013
Alignment:
Q  185 gatgatatggtagggggtaaaccgaaattctctcaaatta 224  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  41189974 gatgatatggtagggggtaaaccgaaattttctaaaatta 41190013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 47231199 - 47231262
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| ||||||||||||   ||||||||||| |||| ||||||||||||| |||||    
T  47231199 tgtaatttgaagttttttggttttggaccttcatgaattttgaccgtacaaaatcgataatatg 47231262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 5457163 - 5457225
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| ||| ||||||||||||| |||||    
T  5457163 tgtaatttgaatatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatat 5457225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 5469452 - 5469506
Alignment:
Q  177 gaaatattgatgatatggtagggg-gtaaaccgaaattctctcaaattacagggg 230  Q
    |||||||  ||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  5469452 gaaatatcaatgatatagtaggggggtaaaccgaaattctctcatattacagggg 5469506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 20158942 - 20158880
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| |||| |||||||||||| |||||    
T  20158942 tgtaatttgaatatttttggttttggaccttcatgaattttgaccgtacaaaatcgaagatat 20158880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 22315334 - 22315288
Alignment:
Q  177 gaaatattgatgatatggtagggggtaaaccgaaattctctcaaatt 223  Q
    ||||||| |||||||||| ||||||||||| |||||| |||||||||    
T  22315334 gaaatatcgatgatatggaagggggtaaactgaaattttctcaaatt 22315288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 26399149 - 26399087
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| |||||||||||||| || |||||    
T  26399149 tgtaatttgaatatttttggttttggaccttcatgaattttgactgtacaaaattgaagatat 26399087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 22152129 - 22152076
Alignment:
Q  120 agatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||   ||| ||||||| ||||||||||||||||||||||||    
T  22152129 agatttttagttttgcacctttatgaattttgactgtacaaaatcgatgatatg 22152076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 13436999 - 13437039
Alignment:
Q  198 ggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    |||||||||| |||||||||||||||||| ||| |||||||    
T  13436999 ggggtaaaccaaaattctctcaaattacaaggggcgaaagt 13437039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 31883550 - 31883606
Alignment:
Q  117 taaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||| |||||||||||   | ||||||||| ||||||||||||||||| ||||||    
T  31883550 taaagaattttggttttggaccatcatgaattttgactgtacaaaatcgaagatatg 31883606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 44228410 - 44228458
Alignment:
Q  182 attgatgatatggtagggggtaaaccgaaattctctcaaattacagggg 230  Q
    ||||||||||||  ||||||||||||||||||  || ||||||||||||    
T  44228410 attgatgatatgccagggggtaaaccgaaatttgcttaaattacagggg 44228458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 238
Target Start/End: Original strand, 82212 - 82369
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac-----------cgaaa 180  Q
    |||||||||||||||||||||||||| ||  ||||| |||||    ||||||||||| |||||||||||||| ||| |||||||           | |||    
T  82212 ttgtttagattccaaccatgtaatttgaaatttttttgttttagaccttcatgaattttgactgtacaaaattgataatatgacaagaggtaaaccaaaa 82311  T
Q  181 tattgatgatatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||| |||||||| | ||||||||||||||||||||||||||||||| ||| |||||||    
T  82312 tatcgatgatatagcagggggtaaaccgaaattctctcaaattacatggggcgaaagt 82369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 212595 - 212658
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  212595 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 212658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 226
Target Start/End: Original strand, 20355079 - 20355224
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg-----------accgaaa 180  Q
    |||||| |||| ||||  |||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||           ||| |||    
T  20355079 ttgttttgatttcaacactgtaatttgaagatttttggttttgaaccttcatgaattttgactgtacaaaatcgatgatatggtagggggtaaaccaaaa 20355178  T
Q  181 tattgatgatatggtagggggtaaaccgaaattctctcaaattaca 226  Q
    ||| |||||||| | |||||||||||||||||||  ||||||||||    
T  20355179 tatcgatgatattgcagggggtaaaccgaaattccttcaaattaca 20355224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 18232071 - 18231985
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgaccg 177  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||  ||||||||||| ||||| |||||||||||| |||||||||    
T  18232071 ttgtttatattccaaccctgtaatttaaagattctttggttttgaaccttcatgaattttgactctacaaaatcgataatatgaccg 18231985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 8855469 - 8855543
Alignment:
Q  99 gattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||| || |||||||| ||| ||||||||||||   ||||||||||| ||||||||||||||||||||||||    
T  8855469 gattccatccttgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatg 8855543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 13153726 - 13153677
Alignment:
Q  189 atatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  13153726 atatggcagggggtaaaccgaaattctctcaaattacaagggacgaaagt 13153677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 31567697 - 31567778
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||| || || |||||||| ||||||||||||||||   ||||| ||||| ||||||||||||||| ||||||||    
T  31567697 ttgtttagatttcatccttgtaatttgaagatttttggttttggaccttcaagaattttgactgtacaaaatcaatgatatg 31567778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 11721348 - 11721411
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  11721348 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 11721411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 7577985 - 7577920
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||||||||||||||||||||   ||||||||||| |||| |||||||||| | ||||||||    
T  7577985 tgtaatttaaagatttttggttttggaccttcatgaattttgacggtacaaaatcaaagatatgac 7577920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 31312746 - 31312681
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| |||||||||||||||    ||||||||||| ||||||||||||||||| ||||||||    
T  31312746 tgtaatttgaagatttttggttttagaccttcatgaattttgactgtacaaaatcgaagatatgac 31312681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 34309603 - 34309538
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||| ||||| ||||||   ||||||||||| ||||||||||||||||||||||||||    
T  34309603 tgtaatttgaagttttttagttttggaccttcatgaattttgactgtacaaaatcgatgatatgac 34309538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 42778870 - 42779013
Alignment:
Q  93 tgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg----------acc-gaaat 181  Q
    |||||||||||||||  |||||||| |||| ||| |||||| |  ||||||||||| || |||||||||||| ||||||||          ||| |||||    
T  42778870 tgtttagattccaactctgtaatttgaagaatttcggttttaaaccttcatgaattttggctgtacaaaatcaatgatatggcagggggtaacctgaaat 42778969  T
Q  182 attgatgatatggtagggggtaaaccgaaattctctcaaattaca 226  Q
    || ||||||||| || ||| |||||||||||||||||||||||||    
T  42778970 atcgatgatatgata-gggataaaccgaaattctctcaaattaca 42779013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 4414009 - 4414065
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    |||||||| ||||||||||||||||   ||||||||||| |||||||||||||||||    
T  4414009 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcga 4414065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 4561896 - 4561832
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| ||||||||||||||||   ||||||||||| || |||||||||||||| |||||||    
T  4561896 tgtaatttgaagatttttggttttggatcttcatgaattttggctgtacaaaatcgaagatatga 4561832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 23159551 - 23159611
Alignment:
Q  112 taatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||||||||||||||||||   ||||||||||| |||| |||||||||||| |||||    
T  23159551 taatttaaagatttttggttttggaccttcatgaattttgacggtacaaaatcgaagatat 23159611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 12148201 - 12148138
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||| ||||||   ||||||||||| ||||||||||||||||| ||||||    
T  12148201 tgtaatttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatg 12148138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 22756357 - 22756294
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| ||| ||||||||||||| ||||||    
T  22756357 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatatg 22756294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 25233919 - 25233856
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| |||| |||||||||||| ||||||    
T  25233919 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgacgatatg 25233856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 25298079 - 25298016
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| |||| |||||||||||| ||||||    
T  25298079 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgacgatatg 25298016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 31920142 - 31920205
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| ||||||||||||   ||||||||||| |||||||||||||||||| |||||    
T  31920142 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgataatatg 31920205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 41123437 - 41123374
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   |||||||||||  |||||||||||||||| ||||||    
T  41123437 tgtaatttgaagatttttggttttggaccttcatgaatttcgactgtacaaaatcgaagatatg 41123374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 40765451 - 40765529
Alignment:
Q  95 tttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||  || |||||||| ||| ||||||||||||   ||||||||||| ||| ||| ||||||||||||||||    
T  40765451 tttagattccgtccttgtaatttgaagttttttggttttggaccttcatgaattttgattgttcaaaatcgatgatatg 40765529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 17190798 - 17190835
Alignment:
Q  138 cttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  17190798 cttcatgaattttgactgtacaaaatcgatgatatgac 17190835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 21144258 - 21144177
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||||||||| |||||||| ||||||||| | ||||   ||||||||||| | || ||||||| | |||||||||    
T  21144258 ttgtttagattccaaccttgtaatttgaagatttttaggtttggaccttcatgaattttaaccgtacaaagtagatgatatg 21144177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 15885611 - 15885567
Alignment:
Q  186 atgatatggtagggggtaaaccgaaattctctcaaattacagggg 230  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||    
T  15885611 atgatatggcagggggtaaaccgaaatttgctcaaattacagggg 15885567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 17668732 - 17668772
Alignment:
Q  198 ggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  17668732 ggggtaaaccaaaattctctcaaattacagggggcgaaagt 17668772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 25962884 - 25962947
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| |||  |||||||||||| ||||||    
T  25962884 tgtaatttgaagatttttggttttggaccttcatgaattttgatagtacaaaatcgaagatatg 25962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 28796429 - 28796492
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| |||||||||||||||||  ||||||||||| ||||  || |||||||| ||||||    
T  28796429 tgtaatttgaagatttttggttttgaaccttcatgaattttgaccatataaaatcgaagatatg 28796492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 30916565 - 30916628
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| |||||||||||||||    ||||||||||| ||| ||||||||||||| ||||||    
T  30916565 tgtaatttgaagatttttggttttataccttcatgaattttgattgtacaaaatcgaagatatg 30916628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 42368519 - 42368582
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||| ||||||   ||||||||||| ||||||||||||||| | ||||||    
T  42368519 tgtaatttgaagattttttgttttggcccttcatgaattttgactgtacaaaatcaaagatatg 42368582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 13153776 - 13153722
Alignment:
Q  119 aagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||||||||   ||||||||||| ||||||||||||||| || |||||    
T  13153776 aagatttttggttttggaccttcatgaattttgactgtacaaaatcaattatatg 13153722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 21039947 - 21040009
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||| ||||||   ||||||||||| ||||||||||||||||| |||||    
T  21039947 tgtaatttgaatattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatat 21040009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 4414068 - 4414105
Alignment:
Q  189 atatggtagggggtaaaccgaaattctctcaaattaca 226  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  4414068 atatggcagggggtaaaccgaaattttctcaaattaca 4414105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 6117670 - 6117731
Alignment:
Q  112 taatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||| || |||||||||||||   ||||| ||||| ||||||||||||||||| ||||||    
T  6117670 taatttgaatatttttggttttggaccttcaagaattttgactgtacaaaatcgaagatatg 6117731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 23108944 - 23108867
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatga 169  Q
    |||||||| ||||| |  |||||||| ||||||| |||||||    ||||||||||| |||||||||||||| |||||    
T  23108944 ttgtttagtttccatcattgtaatttgaagatttatggttttagaccttcatgaattttgactgtacaaaatagatga 23108867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 35687471 - 35687406
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| |||||||||| |||||    ||||| |||| |||| |||||||||||||||||||||    
T  35687471 tgtaatttgaagatttttgattttggactttcataaattttgacggtacaaaatcgatgatatgac 35687406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 21144161 - 21144113
Alignment:
Q  178 aaatattgatgatatggtagggggtaaaccgaaattctctcaaattaca 226  Q
    |||||| |||||||||  || ||||||||| ||||||||||||||||||    
T  21144161 aaatatcgatgatatgacagagggtaaaccaaaattctctcaaattaca 21144113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 23188849 - 23188793
Alignment:
Q  119 aagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||||||||||    ||||||||||| |||| |||||||||||| ||||||||    
T  23188849 aagatttttggttttagaccttcatgaattttgacagtacaaaatcgaagatatgac 23188793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 38874630 - 38874566
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| ||||||||||||||||   ||||||||||  |  |||||||||||||| |||||||    
T  38874630 tgtaatttgaagatttttggttttggaccttcatgaatgttagctgtacaaaatcgaagatatga 38874566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 8237721 - 8237784
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| |||||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  8237721 tgtaatttgaagttttttggttttggtccttcatgaattttgactgtacaaaatcgatgatatg 8237784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 9676513 - 9676448
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||||||||||||||||||||   ||||||||||| |||||||| |||||||| ||||||||    
T  9676513 tgtaatttaaagatttttggttttggatcttcatgaattttgactgtataaaatcgaagatatgac 9676448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 225
Target Start/End: Original strand, 9044463 - 9044608
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattat-gactgtacaaaatcgatgatatg-----------accgaa 179  Q
    |||||||||||||||   |||||||| |||| ||||| |||||   ||||||||||| | |||| ||||||||||||||||||           || |||    
T  9044463 ttgtttagattccaattctgtaatttgaagaattttgattttggaccttcatgaatttttgactatacaaaatcgatgatatggcaaggggtaaactgaa 9044562  T
Q  180 atattgatgatatggtagggggtaaaccgaaattctctcaaattac 225  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||    
T  9044563 atatcgatgatatggcagggggtaaaccaaaattctctcaaattac 9044608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 9222620 - 9222557
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| ||||||||||||   ||||||||||| ||||||||||||||||||||||||    
T  9222620 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatg 9222557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 10546155 - 10546092
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||| |||||||||||| | ||||||||||| | ||||||||||||||||||||||    
T  10546155 tgtaatttgaagttttttggttttggtccttcatgaattttaactgtacaaaatcgatgatatg 10546092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 2270535 - 2270591
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    ||||||| |||||||||||||||||   ||||||||||| |||||||||||||||||    
T  2270535 tgtaattcaaagatttttggttttggaccttcatgaattttgactgtacaaaatcga 2270591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 230
Target Start/End: Original strand, 9662752 - 9662900
Alignment:
Q  93 tgtttagattccaaccatgtaattt-aaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg-----------accgaaa 180  Q
    |||||||||||||||| |||||||| |||||||||| ||||||   ||| ||||||| |||||||||||| |||| ||||||           ||| |||    
T  9662752 tgtttagattccaacc-tgtaatttgaaagattttttgttttggacctttatgaattttgactgtacaaagtcgacgatatgatagggggtaaaccaaaa 9662850  T
Q  181 tattgatgatatggtagggggtaaaccgaaattctctcaaattacagggg 230  Q
    |||  ||||||||  | ||||||||| |||||||||||||||||||||||    
T  9662851 tatcaatgatatgacaaggggtaaactgaaattctctcaaattacagggg 9662900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 12292945 - 12293008
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||||||| |||||||||||||| || ||||||    
T  12292945 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaattgaagatatg 12293008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 20757498 - 20757580
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||||||||||||| |||||||| ||||||   |||||||||  ||| ||||||| | || |||||||||||||||||||    
T  20757498 ttgtttagattccaaccctgtaatttgaagattcagtggttttgaaccttaatgaattttaaccgtacaaaatcgatgatatg 20757580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 25167037 - 25167075
Alignment:
Q  200 ggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  25167037 ggtaaaccgaaattctctcaaattacaagggacgaaagt 25167075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 3108774 - 3108709
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| ||||||||||||||||   |||||| |||| ||| |||| |||||||||||||||||    
T  3108774 tgtaatttgaagatttttggttttggaccttcattaattttgattgtataaaatcgatgatatgac 3108709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 173
Target Start/End: Original strand, 14291160 - 14291217
Alignment:
Q  116 ttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||||||||||||||   ||||||||||| ||||| ||||||||||| ||||||    
T  14291160 ttaaagatttttggttttggaccttcatgaattttgactatacaaaatcgaagatatg 14291217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 32217033 - 32216968
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||| |||| |||||||||||   ||||||||||| ||||||||||||||| | ||||||||    
T  32217033 tgtaatttgaagagttttggttttggaccttcatgaattttgactgtacaaaatcaaagatatgac 32216968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 1227759 - 1227823
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| | ||||||||||||||   ||||||||||| |||| |||||||||||| |||||||    
T  1227759 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatga 1227823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 17158406 - 17158350
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    |||||||| ||||||||||||||||   || |||||||| |||||||||||||||||    
T  17158406 tgtaatttgaagatttttggttttggacctccatgaattttgactgtacaaaatcga 17158350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 25166916 - 25167000
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttgg-ttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    |||||||||||| |||  ||||||||||||||||||   |||||   ||| ||||||| ||||| ||||||||||||||||||||    
T  25166916 ttgtttagattcgaactttgtaatttaaagatttttttattttggacctttatgaattttgactatacaaaatcgatgatatgac 25167000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 9234927 - 9234990
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   |||||| |||| |||||||||||| |||| ||||||    
T  9234927 tgtaatttgaagatttttggttttggaccttcataaattttgactgtacaaactcgaagatatg 9234990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 10343584 - 10343643
Alignment:
Q  114 atttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||| ||||||||||||||||    |||||||||| ||||||||||||||||| ||||||    
T  10343584 atttgaagatttttggttttgtactttcatgaattttgactgtacaaaatcgaagatatg 10343643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 13729229 - 13729166
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||||| ||| |||| |||||||||||| ||||||    
T  13729229 tgtaatttgaagatttttggttttggaccttcatgtattttgacagtacaaaatcgacgatatg 13729166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 16119776 - 16119839
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||| ||||   ||||||||||| ||||| ||||||||||| ||||||    
T  16119776 tgtaatttgaagatttttggatttggaccttcatgaattttgactatacaaaatcgaagatatg 16119839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 18274339 - 18274296
Alignment:
Q  185 gatgatatggtagggggtaaaccgaaattctctcaaattacagg 228  Q
    |||||||||| |||||||||||||||||||  ||||||||||||    
T  18274339 gatgatatggcagggggtaaaccgaaattcgttcaaattacagg 18274296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 22495992 - 22495929
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||   ||||| ||||| |||| |||||||||||| ||||||    
T  22495992 tgtaatttgaagatttttggttttggaccttcaagaattttgacggtacaaaatcgaagatatg 22495929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 26882159 - 26882222
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||| ||||||||   ||||||||||| |||| |||||||||||| ||||||    
T  26882159 tgtaatttgaagatttctggttttggaccttcatgaattttgacagtacaaaatcgacgatatg 26882222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 29942608 - 29942671
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| |||||||||| |||||   ||||||||||| |||| |||||||||||| ||||||    
T  29942608 tgtaatttgaagatttttgattttggaccttcatgaattctgacagtacaaaatcgaagatatg 29942671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 26475845 - 26475907
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||||| || |||||||||||||   ||||||||||| |||| |||||||||||| |||||    
T  26475845 tgtaatttgaatatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatat 26475907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 34414563 - 34414498
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||| || ||||||||| ||||||   ||||||||||| | ||||||||||||||| ||||||||    
T  34414563 tgtaacttgaagattttttgttttggaccttcatgaattttaactgtacaaaatcgaagatatgac 34414498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 3816681 - 3816629
Alignment:
Q  186 atgatatggtagggggtaaaccgaaattctctcaaattacaggggacgaaagt 238  Q
    ||||||| | ||| |||||||| ||||| |||||||||||||||| |||||||    
T  3816681 atgatatagcaggaggtaaaccaaaattttctcaaattacagggggcgaaagt 3816629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 7322053 - 7321997
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    |||||||| ||||||||||||||||   ||||||||||| ||| ||| |||||||||    
T  7322053 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtgcaaaatcga 7321997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 16659697 - 16659661
Alignment:
Q  188 gatatggtagggggtaaaccgaaattctctcaaatta 224  Q
    ||||||||||||||||||||||||||  |||||||||    
T  16659697 gatatggtagggggtaaaccgaaatttgctcaaatta 16659661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 18274403 - 18274331
Alignment:
Q  102 tccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||| |||||||| |||||| |||| ||||||   ||||| |||| | ||||||||||||||||||||||    
T  18274403 tccaaccctgtaatttgaagattctttgattttgaactttcattaattttaactgtacaaaatcgatgatatg 18274331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 21544213 - 21544277
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| | ||||||||||||||   ||||||||||| |||| |||||||||| | |||||||    
T  21544213 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcaaagatatga 21544277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 22362701 - 22362765
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| |||| || ||||||||   ||||||||||| |||| |||||||||||| |||||||    
T  22362701 tgtaatttgaagacttatggttttggaccttcatgaattttgaccgtacaaaatcgaagatatga 22362765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 32603776 - 32603721
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcga 166  Q
    |||||||| |||||||| |||||||   ||||||||||| |||||||||||||||||    
T  32603776 tgtaatttgaagatttt-ggttttggaccttcatgaattttgactgtacaaaatcga 32603721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 33200067 - 33199983
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatgac 175  Q
    ||||||||||| ||||| |||||||| |||||| |||| |||||   ||| |||||||  || |||||||||| |||||||||||    
T  33200067 ttgtttagattacaaccctgtaatttgaagattctttgattttggacctttatgaatttcgaatgtacaaaattgatgatatgac 33199983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 34077580 - 34077544
Alignment:
Q  188 gatatggtagggggtaaaccgaaattctctcaaatta 224  Q
    ||||||||||||||||||||||||||  |||||||||    
T  34077580 gatatggtagggggtaaaccgaaatttgctcaaatta 34077544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 332146 - 332210
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||| |||||||    
T  332146 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatga 332210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 174
Target Start/End: Original strand, 316497 - 316578
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||||||  |||| |||||||| |||||| |||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  316497 ttgtttagattttaaccctgtaatttgaagattatttggttttgaa-cttcatgaatt-tgactgtacaaaatcgatgatatga 316578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 35060 - 34978
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    ||||||||||| ||||| |||||||| ||||||||  |||| |   ||||||||||| ||||| |||||||||||||||||||    
T  35060 ttgtttagatttcaaccctgtaatttgaagattttgtgtttcggaccttcatgaattttgactatacaaaatcgatgatatga 34978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 145201 - 145120
Alignment:
Q  92 ttgtttagattccaaccatgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||| || | |||||| |||||||||| |||||   ||||||||||| |||||||||||||| |||||||||    
T  145201 ttgtttagtttccatccttataatttgaagatttttgattttggaccttcatgaattgtgactgtacaaaatagatgatatg 145120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0430 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 12776 - 12713
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    ||||||| |||||||||||||||||   ||||||||||| |||| |||||||||||| ||||||    
T  12776 tgtaattcaaagatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatg 12713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 18893 - 18830
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||| ||| ||||||||||||||||   ||||||||||| ||||||||||||||||| ||||||    
T  18893 tgtattttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatg 18830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 25795 - 25902
Alignment:
Q  138 cttcatgaattatgactgtacaaaatcgatgatatgaccg------aaatattgatgatatggtaggg-ggtaaaccgaaattctctcaaattacagggg 230  Q
    ||||||||||| ||| |||||||||| |||||||||||        || ||| |||||||||  |||| ||||||||||||||||||||||||||| |||    
T  25795 cttcatgaattttgagtgtacaaaattgatgatatgacaaggagtaaactatcgatgatatgacagggtggtaaaccgaaattctctcaaattacaaggg 25894  T
Q  231 acgaaagt 238  Q
     |||||||    
T  25895 gcgaaagt 25902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 12550 - 12613
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||| ||||||||||||||||    | |||||||| ||||||||||||||||| ||||||    
T  12550 tgtaatttgaagatttttggttttggacttccatgaattttgactgtacaaaatcgaagatatg 12613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1462 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1462
Description:

Target: scaffold1462; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 253 - 295
Alignment:
Q  188 gatatggtagggggtaaaccgaaattctctcaaattacagggg 230  Q
    |||||||||||||||||||  ||||| ||||||||||||||||    
T  253 gatatggtagggggtaaacataaattttctcaaattacagggg 295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 23367 - 23290
Alignment:
Q  97 tagattccaaccatgtaatttaaagatt-tttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatg 173  Q
    |||||||||||| || |||||| ||||| ||||||||||  ||||||| |||| | ||| || |||||||||||||||    
T  23367 tagattccaaccctggaatttatagattctttggttttggagcttcataaattttaactatataaaatcgatgatatg 23290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 84258 - 84318
Alignment:
Q  112 taatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatat 172  Q
    |||||| ||||||| || |||||   |||||||||||  ||||||||||||||||||||||    
T  84258 taatttgaagatttctgattttggaccttcatgaatttcgactgtacaaaatcgatgatat 84318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 63324 - 63260
Alignment:
Q  110 tgtaatttaaagatttttggttttgatgcttcatgaattatgactgtacaaaatcgatgatatga 174  Q
    |||||||| | ||||||||||||||   ||||||||||| |||| |||||||||| | |||||||    
T  63324 tgtaatttgatgatttttggttttggaccttcatgaattttgacagtacaaaatcaaagatatga 63260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University