View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19084_low_21 (Length: 413)
Name: NF19084_low_21
Description: NF19084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19084_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 6 - 262
Target Start/End: Original strand, 25917743 - 25917999
Alignment:
| Q |
6 |
gtcgaagaatatccaattttcatagtaactccaatactaattaatactaaatacaaacaaccacaacaatacatataaataaaagggtcgcgctaacaag |
105 |
Q |
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| T |
25917743 |
gtcgaaaaaaatccaattttcatagtaactccaatactaattaatactaaatacaaacaaccacaacaatacatataaataaaagggtcgcgctaacaag |
25917842 |
T |
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| Q |
106 |
aaccctaaggacactaattaataaagctaaaagtataaattttgcgcccaaaacaataaattttaaacttttataaagttaaatccgaaattttcaatac |
205 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25917843 |
aactctaaggacactaattaataaagctaaaagtataaattttgcgcccgaaacaataaattttaaacttttataaagttaaatccgaaattttcaatac |
25917942 |
T |
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| Q |
206 |
aaaaattttatatttattaacttgaacaatgccctgagagcactcattgcacttttc |
262 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
25917943 |
aaaaattttatatttattaacttaaacaatgccctgagagcactcattgcacttttc |
25917999 |
T |
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