View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19084_low_59 (Length: 243)
Name: NF19084_low_59
Description: NF19084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19084_low_59 |
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Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 34473157 - 34472930
Alignment:
| Q |
1 |
gcgcttttagatttttggtttaattttacattgacnnnnnnnnn-tgcaggggttttactttatcataaatttaactattgatatatctcgagttagtaa |
99 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34473157 |
gcgcttttagatttttggtttaattttacattgacaaaaaaaaaatgcaggggttttactttatcataaatttaactattgatatatctcgagttagtaa |
34473058 |
T |
|
| Q |
100 |
ctttaatttattgttaaatgagaatgatgattagtttttagaatttcacaatcaattggcattgaaggagtaacctagttgttttggttgagagtgagct |
199 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
34473057 |
ctttaatttattgttaaatgagaatgatgattagtttttagaatttcacaatcaattggcattgaaggagtaacctagttgttttggttgagagtgagct |
34472958 |
T |
|
| Q |
200 |
agtggtctagttctgtccgggagtagat |
227 |
Q |
| |
|
|||||||||||||||||||||||||||| |
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|
| T |
34472957 |
agtggtctagttctgtccgggagtagat |
34472930 |
T |
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