View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19084_low_73 (Length: 216)
Name: NF19084_low_73
Description: NF19084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19084_low_73 |
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Alignment Details
Target: chr8 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 33122867 - 33122684
Alignment:
| Q |
22 |
aatcacatttgtatgagcttctagcaagtca------tattattattattcatgccaacaactcttggaatattgagttagttctatctatttttaacgt |
115 |
Q |
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| T |
33122867 |
aatcacatttgtatgagcttctagcaagtcacattattattattattattcatttcaacaactcttggaatattgagttagttctgtctatttttaacgt |
33122768 |
T |
|
| Q |
116 |
agcagcaattcttaatattcctagtctctctctctaattcgcaacaagacaagcgtgtttggagttaccaagctaatggattatattc |
203 |
Q |
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||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33122767 |
agctgcaattcttaatattcctagtct----ctctaattcgcaacaagacaagcgtgtttggagttaccaagctaatggattatattc |
33122684 |
T |
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