View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19085_high_15 (Length: 317)
Name: NF19085_high_15
Description: NF19085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19085_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 53 - 293
Target Start/End: Original strand, 20768844 - 20769084
Alignment:
| Q |
53 |
agaaactaaactaaccccttcaatgggtatatatcttgtttgttagatccaacctccactgatgcattcttttcgattctaacccatcataaatattaat |
152 |
Q |
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| T |
20768844 |
agaaactaaactaactccttcaatgggtatatatcttgtttgttagatccaacctccactggtgcattcttttcgattctaacccatcctaaatattaat |
20768943 |
T |
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| Q |
153 |
tttatgttaaagacaaatattgaaaacttaaatatgctctcaataatttcaaatggttggtctagttgagaatggcatgacctgtagtcaaaatcttgcc |
252 |
Q |
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| T |
20768944 |
tttatggtaaaaacaaatattgaaaacttaaatatgctctcaataatttcaaatggttggtctagttgagcatggcatgacctgtagtcaaaatcttgcc |
20769043 |
T |
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| Q |
253 |
ggtttaagttttcaattagtttctttgaagtgagataaatg |
293 |
Q |
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| T |
20769044 |
ggtttaagtttccaattagtctctttgaagtgagataaatg |
20769084 |
T |
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