View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19085_high_18 (Length: 279)
Name: NF19085_high_18
Description: NF19085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19085_high_18 |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 22326227 - 22326449
Alignment:
| Q |
1 |
gtgtttgggttcattctgatccaagttgttgacattcaatttccattgagcaacgtaacccacagatttgacaagataggccattgtttttctttccagt |
100 |
Q |
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| T |
22326227 |
gtgtttgggttcattctgatccaagttgttgacattcaatttccattgagcaaggtaacccactgatttgacaagataggccattgtttttctttccagt |
22326326 |
T |
|
| Q |
101 |
tctttctctaaagaaatacaaaaaacagtgtttagttttacaaaaacatagaataaaaacactaaagaatgttatataaatagatcatatagtcgcagat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22326327 |
tctttctctaaagaaatacaaaaaacagtgtttagttttacaaaaacattgaataaaaacactaaagaatgttatataaatagatcatatagtcgcagat |
22326426 |
T |
|
| Q |
201 |
tcgcatagtattcagcaacagat |
223 |
Q |
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|||||||| |||||||||||||| |
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| T |
22326427 |
tcgcatagaattcagcaacagat |
22326449 |
T |
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