View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19085_high_23 (Length: 266)
Name: NF19085_high_23
Description: NF19085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19085_high_23 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 11654785 - 11654818
Alignment:
| Q |
134 |
atcaactaacagcccttctacatcacataaccca |
167 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
11654785 |
atcaactaacagcccttctacatcacataaccca |
11654818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 11668553 - 11668586
Alignment:
| Q |
134 |
atcaactaacagcccttctacatcacataaccca |
167 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
11668553 |
atcaactaacagcccttctacatcacataaccca |
11668586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University