View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19085_high_3 (Length: 480)

Name: NF19085_high_3
Description: NF19085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19085_high_3
NF19085_high_3
[»] chr8 (4 HSPs)
chr8 (12-480)||(41127037-41127505)
chr8 (112-209)||(26494893-26494990)
chr8 (301-365)||(26506761-26506825)
chr8 (295-371)||(26494710-26494786)
[»] chr2 (7 HSPs)
chr2 (12-467)||(2327023-2327475)
chr2 (12-467)||(2321169-2321622)
chr2 (14-467)||(2351044-2351494)
chr2 (12-424)||(2303511-2303920)
chr2 (82-467)||(2330738-2331123)
chr2 (12-467)||(2293855-2294307)
chr2 (12-467)||(2310186-2310638)
[»] chr5 (1 HSPs)
chr5 (102-209)||(15176295-15176402)
[»] chr4 (1 HSPs)
chr4 (163-226)||(55017070-55017133)


Alignment Details
Target: chr8 (Bit Score: 421; Significance: 0; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 12 - 480
Target Start/End: Complemental strand, 41127505 - 41127037
Alignment:
Q  12 atgaacttgcagttgatttttcataaccacggtgaattcagttttttccgacaaatcaacataaccagctccctctggaatcttccaattaaaattccag 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41127505 atgaacttgcagtggatttttcataaccacggtgaattcagttttttccgacaaatcaacataaccagctccctctagaatcttccaattaaaattccag 41127406  T
Q  112 accaaattagccacaaagtattccaaatggaccaaagctaaattatatccgggacaaattctcctcccaactccaaacggcatcatctttatctctttgg 211  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  41127405 accaaattagccacaaagtattccaaatggagcaaagctaaattatatccaggacaaattctcctcccaactccaaacggcatcatctttatctctttag 41127306  T
Q  212 tcccggtaatatcaaaagcctcatccttcaaaaacctttcaggtttaaactccaatggatcttcccgaacacgagggtccctccctatgtctgccaccat 311  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  41127305 tcccggtaatatcaaaagcctcatccttcaaaaacctttctggtttaaactccaatggatcttcccaaacactagggtccctccctatgtctgccaccat 41127206  T
Q  312 gaaattcactaccgcatttttaggcagcaagtaaccgttgaaaaccacatcctccttcaccgcatggggcaacacaaagtgccccggtgggtgacgcctc 411  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41127205 gaaattcactaccacatttttaggcagcaagtaaccgtcgaaaaccacatcctccttcaccgcatggggcaacacaaagtgccccggtgggtgacacctc 41127106  T
Q  412 agcccttccaaaatcacgcactttagatatggtaggttctgcaagtcttcctctttaatttccttattc 480  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41127105 agcccttccaaaatcacacactttagatatggtaggttctgcaagtcttcctctttaatttccttattc 41127037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 26494990 - 26494893
Alignment:
Q  112 accaaattagccacaaagtattccaaatggaccaaagctaaattatatccgggacaaattctcctcccaactccaaacggcatcatctttatctcttt 209  Q
    ||||||||||| ||||||||||| ||||||| ||  || || |||||  | |||||||| ||||||||  ||||||||||||||||||||||||||||    
T  26494990 accaaattagcaacaaagtattctaaatggagcattgccaatttataggcaggacaaatcctcctccctgctccaaacggcatcatctttatctcttt 26494893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 26506825 - 26506761
Alignment:
Q  301 tctgccaccatgaaattcactaccgcatttttaggcagcaagtaaccgttgaaaaccacatcctc 365  Q
    ||||||||||| ||||| |||  | |||||||||||| |||||||||||| |||| |||||||||    
T  26506825 tctgccaccataaaattaactgtcccatttttaggcaccaagtaaccgttaaaaatcacatcctc 26506761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 371
Target Start/End: Complemental strand, 26494786 - 26494710
Alignment:
Q  295 cctatgtctgccaccatgaaattcactaccgcatttttaggcagcaagtaaccgttgaaaaccacatcctccttcac 371  Q
    ||||| ||||||||||| ||||||||   | |||||||||||| ||||||||| || ||||| | ||||||| ||||    
T  26494786 cctatatctgccaccataaaattcacagtcccatttttaggcaccaagtaaccattcaaaacaatatcctccgtcac 26494710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 12 - 467
Target Start/End: Complemental strand, 2327475 - 2327023
Alignment:
Q  12 atgaacttgcagttgatttttcataaccacggtgaattcagttttttccgacaaatcaacataaccagctccctctggaatcttccaattaaaattccag 111  Q
    ||||||||||| | |||||||||| |||||||||||||||  |||||| |||||||| ||||  |||   ||||| |||| ||||||||  ||||||||     
T  2327475 atgaacttgcaatggatttttcatcaccacggtgaattcaaatttttctgacaaatcgacatggcca---ccctccggaaccttccaatcgaaattccaa 2327379  T
Q  112 accaaattagccacaaagtattccaaatggaccaaagctaaattatatccgggacaaattctcctcccaactccaaacggcatcatctttatctctttgg 211  Q
    ||||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||      
T  2327378 accaaattagccacaaaatattccaaatggagtaaagctaaattatatcccggacaaattctcctaccagctccaaacggcatcatcttgatctctttac 2327279  T
Q  212 tcccggtaatatcaaaagcctcatccttcaaaaacctttcaggtttaaactccaatggatcttcccgaacacgagggtccctccctatgtctgccaccat 311  Q
    |||| ||||||||||||| ||||||||||||||||||||| || |||||||||| |||||| |||| ||||||||| |||  ||| || |||||||||||    
T  2327278 tccctgtaatatcaaaagtctcatccttcaaaaacctttctggcttaaactccattggatcctcccaaacacgaggatccaaccccatctctgccaccat 2327179  T
Q  312 gaaattcactaccgcatttttaggcagcaagtaaccgttgaaaaccacatcctccttcaccgcatggggcaacacaaagtgccccggtgggtgacgcctc 411  Q
    |||||||||   | |||||||||||| ||| ||||| || ||||||||||| ||  |||| ||||| ||||||||||| ||||| ||||| |||||||||    
T  2327178 gaaattcaccgtcccatttttaggcaccaaataaccattcaaaaccacatcatcgctcactgcatgaggcaacacaaaatgccctggtggatgacgcctc 2327079  T
Q  412 agcccttccaaaatcacgcactttagatatggtaggttctgcaagtcttcctcttt 467  Q
    | ||||||||||| ||| ||||| | |||  | || || |||||||||||||||||    
T  2327078 aacccttccaaaaccacacacttcaaataccgaagtttatgcaagtcttcctcttt 2327023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 12 - 467
Target Start/End: Complemental strand, 2321622 - 2321169
Alignment:
Q  12 atgaacttgcagttgatttttcataaccacggtgaattcagttttttccgacaaatcaacataaccagctccctctggaatcttccaattaaaattccag 111  Q
    ||||||||||| | |||||||||| ||||  |||||||||  ||||||||||||||||||||  |||   ||||| |||| || |||||| ||||||||     
T  2321622 atgaacttgcaatggatttttcatcaccatagtgaattcatctttttccgacaaatcaacatggcca---ccctccggaagctgccaattgaaattccaa 2321526  T
Q  112 accaaattagccacaaagtattccaaatggaccaaagctaaattatatccgggacaaattctcctcccaactccaaacggcatcatctttatctctttgg 211  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||||||||||||      
T  2321525 accaagttagccacaaaatattccaaatggagcaaagctaaattaagtccgggacaaattctccttccagctccaaacggcatcatctttatctctttac 2321426  T
Q  212 tcccggtaatatcaaaagcctcatccttcaaaaacctttcaggtttaaactccaatggatcttcccgaacacgagggtccctccctatgtctgccaccat 311  Q
    ||||  |||||||||||| ||||||||||||||||||||| || |||||||||| |||||| |||| ||||||||| |||| | | || || | || |||    
T  2321425 tccctataatatcaaaagtctcatccttcaaaaacctttctggcttaaactccattggatcctcccaaacacgaggatcccacgccatctccgacagcat 2321326  T
Q  312 gaaattcactaccgcatttttaggcagcaagtaaccgttgaaaaccacatcctccttcaccgcatggggcaacacaaagtgcccc-ggtgggtgacgcct 410  Q
    |||||||||   | |||||||||||| ||| |||||||| |||||||||||||| |||||||  || | ||||||||| |||||| ||||| ||||||||    
T  2321325 gaaattcaccgtcccatttttaggcaccaaataaccgttcaaaaccacatcctctttcaccgtgtgtgccaacacaaaatgcccctggtggatgacgcct 2321226  T
Q  411 cagcccttccaaaatcacgcactttagatatggtaggttctgcaagtcttcctcttt 467  Q
    || ||||||||||| ||||||||| | |||| | || |||||||||| |||||||||    
T  2321225 catcccttccaaaaccacgcacttcaaatatcgaagtttctgcaagttttcctcttt 2321169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 14 - 467
Target Start/End: Complemental strand, 2351494 - 2351044
Alignment:
Q  14 gaacttgcagttgatttttcataaccacggtgaattcagttttttccgacaaatcaacataaccagctccctctggaatcttccaattaaaattccagac 113  Q
    ||||||||| | |||||||||| ||||| ||||||||   ||||||||||||||||||||  ||| ||   ||||||| ||||||||  |||||||| ||    
T  2351494 gaacttgcaatggatttttcatcaccacagtgaattcttgtttttccgacaaatcaacatgcccacct---tctggaaccttccaatcgaaattccaaac 2351398  T
Q  114 caaattagccacaaagtattccaaatggaccaaagctaaattatatccgggacaaattctcctcccaactccaaacggcatcatctttatctctttggtc 213  Q
    ||||||||||||||| |||||||| || | |||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||  ||    
T  2351397 caaattagccacaaaatattccaagtgaagcaaagctaaattatatccgggacagattctcctaccaacaccaaatggcatcatctttatctctttactc 2351298  T
Q  214 ccggtaatatcaaaagcctcatccttcaaaaacctttcaggtttaaactccaatggatcttcccgaacacgagggtccctccctatgtctgccaccatga 313  Q
    || ||||| ||||| |  ||||||||||||||||| || || |||||||||| |||||| |||| ||||||||| |||| ||| || ||||||||||| |    
T  2351297 cccgtaatgtcaaatgtttcatccttcaaaaacctctctggcttaaactccattggatcctcccaaacacgaggatcccaccccatctctgccaccataa 2351198  T
Q  314 aattcactaccgcatttttaggcagcaagtaaccgttgaaaaccacatcctccttcaccgcatggggcaacacaaagtgccccggtgggtgacgcctcag 413  Q
    |||| ||   | |||||||||||| ||| |||||||| |||| |||||||||  ||||||| || |||||||||   ||||||||||| ||||||||||     
T  2351197 aattgaccgtcccatttttaggcaccaaataaccgttaaaaagcacatcctctgtcaccgcgtgtggcaacacattatgccccggtggatgacgcctcaa 2351098  T
Q  414 cccttccaaaatcacgcactttagatatggtaggttctgcaagtcttcctcttt 467  Q
    ||||||||||| ||| || || |||||    || |||||||| |||||||||||    
T  2351097 cccttccaaaaccacacatttcagatacaaaagtttctgcaaatcttcctcttt 2351044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 12 - 424
Target Start/End: Complemental strand, 2303920 - 2303511
Alignment:
Q  12 atgaacttgcagttgatttttcataaccacggtgaattcagttttttccgacaaatcaacataaccagctccctctggaatcttccaattaaaattccag 111  Q
    ||||||||||| | |||||||||| ||||   |||||||   ||||||||||||||||||||| ||    |||||||||| ||||||||  ||||||||     
T  2303920 atgaacttgcaatggatttttcatcaccatattgaattcttgtttttccgacaaatcaacatagccg---ccctctggaagcttccaatcgaaattccaa 2303824  T
Q  112 accaaattagccacaaagtattccaaatggaccaaagctaaattatatccgggacaaattctcctcccaactccaaacggcatcatctttatctctttgg 211  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||||  | | ||||||||||||||  || || |||||||||||||||||||||| ||      
T  2303823 accaaattagccacaaaatattctaaatggagcaaagctaaattaagtgcaggacaaattctcctttcagcttcaaacggcatcatctttatctccttac 2303724  T
Q  212 tcccggtaatatcaaaagcctcatccttcaaaaacctttcaggtttaaactccaatggatcttcccgaacacgagggtccctccctatgtctgccaccat 311  Q
    |||| ||||| ||||||  |||||||||| |||||||||| || |||||||||| |||||| |||| ||||||||| |||| ||| || || |||| |||    
T  2303723 tccctgtaatgtcaaaattctcatccttccaaaacctttctggcttaaactccattggatcctcccaaacacgaggatcccaccccatctccgccagcat 2303624  T
Q  312 gaaattcactaccgcatttttaggcagcaagtaaccgttgaaaaccacatcctccttcaccgcatggggcaacacaaagtgccccggtgggtgacgcctc 411  Q
    |||||||||   | |||||||||||| ||| |||||||| |||||||||||||| |||||||| || ||||||| ||| ||||||||||| |||||||||    
T  2303623 gaaattcaccgtcccatttttaggcaccaaataaccgttcaaaaccacatcctctttcaccgcgtgtggcaacagaaaatgccccggtggatgacgcctc 2303524  T
Q  412 agcccttccaaaa 424  Q
    | |||||||||||    
T  2303523 aacccttccaaaa 2303511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 82 - 467
Target Start/End: Complemental strand, 2331123 - 2330738
Alignment:
Q  82 ccctctggaatcttccaattaaaattccagaccaaattagccacaaagtattccaaatggaccaaagctaaattatatccgggacaaattctcctcccaa 181  Q
    ||||| |||| ||||||||  |||||||| ||||||||||||||||| ||||||||||| | |||||||||||||||||| ||||||||||||||||||     
T  2331123 ccctcgggaaccttccaatcgaaattccaaaccaaattagccacaaaatattccaaatgaagcaaagctaaattatatccaggacaaattctcctcccag 2331024  T
Q  182 ctccaaacggcatcatctttatctctttggtcccggtaatatcaaaagcctcatccttcaaaaacctttcaggtttaaactccaatggatcttcccgaac 281  Q
    ||||||| ||||||||||||||||||||  | || ||||| ||||||| ||||||||||||||||||||| || ||||| |||| |||||| |||| |||    
T  2331023 ctccaaatggcatcatctttatctctttacttcctgtaatgtcaaaagtctcatccttcaaaaacctttctggcttaaattccattggatcctcccaaac 2330924  T
Q  282 acgagggtccctccctatgtctgccaccatgaaattcactaccgcatttttaggcagcaagtaaccgttgaaaaccacatcctccttcaccgcatggggc 381  Q
    ||||||||||  ||| || ||||| ||||| ||||||||   | ||| |||||||| ||| ||||| || ||||||||||||||  |||| || || |||    
T  2330923 acgagggtccaaccccatctctgcaaccataaaattcaccgtcccatctttaggcaccaaataaccattcaaaaccacatcctcgctcactgcgtgaggc 2330824  T
Q  382 aacacaaagtgccccggtgggtgacgcctcagcccttccaaaatcacgcactttagatatggtaggttctgcaagtcttcctcttt 467  Q
    ||||| || ||||| ||||| |||||||||| ||||||||||| ||||||||| | |||  | || || |||||||||||||||||    
T  2330823 aacacgaaatgccctggtggatgacgcctcaacccttccaaaaccacgcacttcaaataccgaagtttatgcaagtcttcctcttt 2330738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 12 - 467
Target Start/End: Complemental strand, 2294307 - 2293855
Alignment:
Q  12 atgaacttgcagttgatttttcataaccacggtgaattcagttttttccgacaaatcaacataaccagctccctctggaatcttccaattaaaattccag 111  Q
    ||||||||||| | |||||||||| |||| |||||||||   | |||||| |||||||||||  ||    |||||||||| ||||||||  ||||||||     
T  2294307 atgaacttgcaatggatttttcatcaccatggtgaattcttgtatttccgtcaaatcaacatgcccg---ccctctggaaccttccaatcgaaattccaa 2294211  T
Q  112 accaaattagccacaaagtattccaaatggaccaaagctaaattatatccgggacaaattctcctcccaactccaaacggcatcatctttatctctttgg 211  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||| || ||| ||||||||||||||||||||||||||||      
T  2294210 accaagttagccacaaaatattccaaatggagcaaagctaaattaagtccgggacaaattcttcttccagctccaaacggcatcatctttatctctttac 2294111  T
Q  212 tcccggtaatatcaaaagcctcatccttcaaaaacctttcaggtttaaactccaatggatcttcccgaacacgagggtccctccctatgtctgccaccat 311  Q
    | || ||||| ||||||| ||||||||||||||||||||| || ||||||||||| || || |||| ||||||||| |||  | | || || |||| ||     
T  2294110 ttcctgtaatgtcaaaagtctcatccttcaaaaacctttctggcttaaactccaacgggtcctcccaaacacgaggatccaacgccatctccgccagcaa 2294011  T
Q  312 gaaattcactaccgcatttttaggcagcaagtaaccgttgaaaaccacatcctccttcaccgcatggggcaacacaaagtgccccggtgggtgacgcctc 411  Q
    |||||||||   | | |||||||||| ||| |||||||  |||||||||||||| |||||||| || ||||||  ||| | ||||||||| |||||||||    
T  2294010 gaaattcaccgtcccgtttttaggcaccaaataaccgtccaaaaccacatcctctttcaccgcgtgtggcaacggaaatttccccggtggatgacgcctc 2293911  T
Q  412 agcccttccaaaatcacgcactttagatatggtaggttctgcaagtcttcctcttt 467  Q
    | ||||||||||| ||| ||||| | |||  | || ||||||||||||||||||||    
T  2293910 aacccttccaaaaccacacacttcaaataccgaagtttctgcaagtcttcctcttt 2293855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 12 - 467
Target Start/End: Complemental strand, 2310638 - 2310186
Alignment:
Q  12 atgaacttgcagttgatttttcataaccacggtgaattcagttttttccgacaaatcaacataaccagctccctctggaatcttccaattaaaattccag 111  Q
    ||||||||||| | |||||||||| ||||  ||||||||   | |||||| |||||||||||  ||    |||||||||| ||||||||  ||||||||     
T  2310638 atgaacttgcactggatttttcatcaccatagtgaattcttgtatttccgtcaaatcaacatgcccg---ccctctggaaccttccaatcgaaattccaa 2310542  T
Q  112 accaaattagccacaaagtattccaaatggaccaaagctaaattatatccgggacaaattctcctcccaactccaaacggcatcatctttatctctttgg 211  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||| || ||| ||||||||||||||||||||||||||||      
T  2310541 accaaattagccacaaaatattccaaatggagcaaagctaaattaagtccgggacaaattcttcttccagctccaaacggcatcatctttatctctttac 2310442  T
Q  212 tcccggtaatatcaaaagcctcatccttcaaaaacctttcaggtttaaactccaatggatcttcccgaacacgagggtccctccctatgtctgccaccat 311  Q
    | || | |||  |||||| ||||||||||||||||||||| || |||||||||||||| || |||| ||||||| | |||  | | || || ||||  |     
T  2310441 ttcctggaatgacaaaagtctcatccttcaaaaacctttctggcttaaactccaatgggtcctcccaaacacgacgatccaacgccatctccgccagaaa 2310342  T
Q  312 gaaattcactaccgcatttttaggcagcaagtaaccgttgaaaaccacatcctccttcaccgcatggggcaacacaaagtgccccggtgggtgacgcctc 411  Q
    |||||||||   | | |||||||||| ||| |||||||  |||||||||||||| |||||||| || ||||||  ||| | ||||| ||| |||||||||    
T  2310341 gaaattcaccgtcccgtttttaggcaccaaataaccgtccaaaaccacatcctctttcaccgcgtgtggcaacggaaatttccccgatggatgacgcctc 2310242  T
Q  412 agcccttccaaaatcacgcactttagatatggtaggttctgcaagtcttcctcttt 467  Q
    | ||||||||||| ||| ||||| | |||    || ||||||||||||||||||||    
T  2310241 aacccttccaaaaccacacacttcaaataccaaagtttctgcaagtcttcctcttt 2310186  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 15176295 - 15176402
Alignment:
Q  102 aaaattccagaccaaattagccacaaagtattccaaatggaccaaagctaaattatatccgggacaaattctcctcccaactccaaacggcatcatcttt 201  Q
    ||||||| | || ||||| || |||||||||||||| || | ||| ||||||  ||| || ||||| |||||||||||  ||||||| ||||||||||||    
T  15176295 aaaattcaaaacaaaattggcaacaaagtattccaagtgcaacaatgctaaaccatagccaggacacattctcctccctgctccaaatggcatcatcttt 15176394  T
Q  202 atctcttt 209  Q
    ||||||||    
T  15176395 atctcttt 15176402  T

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Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 55017133 - 55017070
Alignment:
Q  163 ggacaaattctcctcccaactccaaacggcatcatctttatctctttggtcccggtaatatcaa 226  Q
    |||||||| ||||||||| | ||||||||||||||||| |||||||| || || ||||||||||    
T  55017133 ggacaaatcctcctcccagcaccaaacggcatcatcttcatctctttagttcctgtaatatcaa 55017070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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