View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19085_high_34 (Length: 214)
Name: NF19085_high_34
Description: NF19085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19085_high_34 |
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Alignment Details
Target: chr4 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 54600976 - 54600782
Alignment:
| Q |
4 |
ctgtcacttgccatattatgtcaatgatttgcttttatcaatggtttatattgatgatcgaaggaaatttatggttcatagtgtttctaagtacattttc |
103 |
Q |
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| T |
54600976 |
ctgtcacttgccatattatgtcaatgatttgcttttatcaatggtttatattgatgaatgaaggaaatttatggttcatagtgtttctaagtacattttc |
54600877 |
T |
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| Q |
104 |
aatgttttatcttcataggccacattgctggattttgcgcgctttgtgcaattcagaatcatgttagctgtgcgctgcaagcaactggaagaata |
198 |
Q |
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| T |
54600876 |
aatgttttatctttataggccacattgctggattttgcgcgctttgtgcaattcagaatcatgttagctgtgcgctgcaagcaactggaagaata |
54600782 |
T |
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