View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19085_low_15 (Length: 328)
Name: NF19085_low_15
Description: NF19085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19085_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 27 - 321
Target Start/End: Complemental strand, 35332858 - 35332560
Alignment:
| Q |
27 |
tgtcgagtcaatgactatgccaagttttaaaactatgtatttaatttataatattttctactagaacttgggtcccaataa----gaaacaacataaata |
122 |
Q |
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| T |
35332858 |
tgtcgagtcgatgactatgtcaagttttaaaactatgtatttaatttataatattttctactagaacttgggacccaataaataagaaacaacataaata |
35332759 |
T |
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| Q |
123 |
aatattgcaaaaagagtctttcgtttggaaaattataacaaacttgaggggttaaactgcaaagaaaagaatgtcactatcatcattgtttttgttctta |
222 |
Q |
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| T |
35332758 |
aatattgcaaaaagagtctttcatttggaaaattataacaaacttgaggggttaaactgcaaagaaaagaatgtcactatcatcattgtttttgttctta |
35332659 |
T |
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| Q |
223 |
ttgtacgcgccagaaacaaaaacctgagtgagaaaaacagtaagagtgagtcaaagtgccgtcttcaaacctacaaaatgcaaacatatgttcatctca |
321 |
Q |
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| T |
35332658 |
ttgtacgcgccagaaacaaaaacctgagtgagaaaaacagtaagagtgagtcaaagtgccgtcttcaaacctacaaaatgcaaacatatgttcttctca |
35332560 |
T |
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