View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19085_low_8 (Length: 395)
Name: NF19085_low_8
Description: NF19085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19085_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 355
Target Start/End: Complemental strand, 16738734 - 16738382
Alignment:
| Q |
1 |
aaacctacgctccaagtgaaacttgtgctagaaatttgattatggcaagccaattgaaggtctctccaagaaccatccgatagaaaagggtataaaccac |
100 |
Q |
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| T |
16738734 |
aaacctacgctccaagtgaaacttgtgctagaaatttgattatggcaagccaattgaaggtctctccaagaaacatctaatagaaaagagtataaaccac |
16738635 |
T |
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| Q |
101 |
aatagccaccctggacaagaacaaagattaagctttctagaagaccaaataaaaaacatctaaaagaaccatcgcatgcagaaatagtcactcattataa |
200 |
Q |
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| T |
16738634 |
aatagccaccctggacaagaacaaagattaagctttctagaagaccaaataaaaaacatctaaaagaaccatcacatgcagaaatagtcactcattataa |
16738535 |
T |
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| Q |
201 |
atgatcaaggctttaagctacttcctacaacctaaatttaatagcaaatttggtaattcatttgaagggaagaacgttggtgaaaacaagagtcaaggga |
300 |
Q |
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| T |
16738534 |
atgatcaaggctttaagctacttcctacaacctaaatttaatagcaaatttggtaa-tcatctgaagggaagaacgttggtgaaaacaagagtcaaggg- |
16738437 |
T |
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| Q |
301 |
tctaaacaaagtacccatcattcatcacggattccccttcaattattgtgcttaa |
355 |
Q |
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| T |
16738436 |
tctaaacaaagtacccatcattcatcacggattccccttcaattattgtgcttaa |
16738382 |
T |
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