View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19086_high_10 (Length: 217)
Name: NF19086_high_10
Description: NF19086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19086_high_10 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 50243636 - 50243437
Alignment:
| Q |
18 |
gcatcaatcctcaattttccattcagcttaagaaagaaaaataaaatccaacctgcaacgaaaatagctatgacaataagaagctcctcaaaagctccac |
117 |
Q |
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| T |
50243636 |
gcatcaatcctcaattttccattcagcttaagaaagaaaaataaaatccaacctgcaacgaaaatagctatgacaataagaagctcctcaaaagctccac |
50243537 |
T |
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| Q |
118 |
caactaaaactgataatcgtgcaatccctatagcaagcactcctgctgaaattgttcccaaagcacgattgaaccctttgttaagggttgcacctaatct |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50243536 |
caactaaaactgataatcgtgcaatccctatagcaagcactcctgctgaaattgttcccaaagcacgattgaaccctttgttaagggttgcacctaatct |
50243437 |
T |
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