View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19086_low_5 (Length: 339)
Name: NF19086_low_5
Description: NF19086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19086_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 49026609 - 49026930
Alignment:
| Q |
1 |
tcgtgttgacctcgatgaggaaaattatatggaagagatggacgatgatgttgaggaacagatagatgacgatggagtggatggaggcgaagatgaaaat |
100 |
Q |
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| T |
49026609 |
tcgtgttgacctcgatgaggaaaattatatggaagagatggacgatgatgttgaggaacagatagatgacgatggagtggatggaggcgaagatgaaaat |
49026708 |
T |
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| Q |
101 |
gctgaaggtagtgttgaagaacacgaatatgaggagacagcagcagaggctggtcagaaagaccaatttcccgaaggagaaaaaagtgaccacggcgctg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49026709 |
gctgaaggtagtgttgaagaacacgaatatgaggagacagcagcagaggctggtcagaaagaccaatttcccgaaggagaaaaaagtgaccacggcgctg |
49026808 |
T |
|
| Q |
201 |
aagaagatgagcataaaccagctctcatcgatgaagaggagagagagaagcatgatgaacttctttcccgtcctcctcatgggtctgaagtctttattgg |
300 |
Q |
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|||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49026809 |
aagaagatgagcttaaaccagctctcattgatgaagaggagagagagaagcatgatgaacttctttcccgtcctcctcatgggtctgaagtctttattgg |
49026908 |
T |
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| Q |
301 |
tggacttcctcgggatacatct |
322 |
Q |
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||||||||||||||||||||| |
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| T |
49026909 |
cggacttcctcgggatacatct |
49026930 |
T |
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