View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19087_low_11 (Length: 239)
Name: NF19087_low_11
Description: NF19087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19087_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 4315422 - 4315213
Alignment:
| Q |
18 |
aaaacattgcaacttctctccggcgccggtgcggttaaaccgcaaacaccggaatcttcatcttccaccgacacacttccgtcattttccactgacgaaa |
117 |
Q |
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| T |
4315422 |
aaaacattgcaacttctctccggcgccggtgcggttaaaccgcaaacaccggaatcttcatcttccaccgacacacttccgtcattttccactgacgaaa |
4315323 |
T |
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| Q |
118 |
ccgctcgtaacgcttcatttctccgtccagaaacacctctaccaggaaaagcacgtagcaaacgctcacgcgctgcacctggcgactggtccacgcgcct |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4315322 |
ccgctcgtaacgcttcatttctccgtccagaaacacctctaccaggaaaagcacgtagcaaacgctcacgcgctgcacctggcgactggtccacgcgcct |
4315223 |
T |
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| Q |
218 |
acttcatctc |
227 |
Q |
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|||||||||| |
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| T |
4315222 |
acttcatctc |
4315213 |
T |
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