View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19087_low_15 (Length: 236)
Name: NF19087_low_15
Description: NF19087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19087_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 32724202 - 32724419
Alignment:
| Q |
1 |
cgcgttatatgaagtattgcctactttgagtggaagcttttcacggttttgtcctttataaacaccgccttgttgggttgtatataaattactcttagcc |
100 |
Q |
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|||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32724202 |
cgcgttatatgaagtattgcctgctttgagtggaagcctttcatggttttgtcctttataaacaccgccttgttgggttgtatataaattactcttagcc |
32724301 |
T |
|
| Q |
101 |
tcgatttccaagcaatatgagaatttaaagtgtaccataagagttgcacacaagtcaaggctaagtgaagtcgtcaatgctatgttccatcctcaagtac |
200 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
32724302 |
tcgatttccaagcaatatgagaatttaaagtgtgccataagagttgcacccaagtcaaggataagtgaagtcgtcaatgctatgttccatcctcaagtac |
32724401 |
T |
|
| Q |
201 |
gccacatcgcgaggtatt |
218 |
Q |
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|||||||||||||||||| |
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| T |
32724402 |
gccacatcgcgaggtatt |
32724419 |
T |
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