View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19088_high_6 (Length: 405)
Name: NF19088_high_6
Description: NF19088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19088_high_6 |
 | |
|
| [»] chr4 (4 HSPs) |
| |
|
| [»] scaffold0289 (1 HSPs) |
| |
|
| [»] scaffold0061 (1 HSPs) |
| | |
|
| [»] scaffold0010 (1 HSPs) |
| | |
|
| [»] scaffold1043 (1 HSPs) |
| | |
|
| [»] scaffold0042 (1 HSPs) |
| |
|
| [»] chr5 (2 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 115; Significance: 3e-58; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 173 - 403
Target Start/End: Complemental strand, 7847618 - 7847388
Alignment:
| Q |
173 |
gctctgatggtgacactaggaagggaatatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaa |
272 |
Q |
| |
|
|||||||| ||||||| | || || ||||||||||||||||||||||||| |||| || |||| | |||||| |||||||||||||||||||||| ||| |
|
|
| T |
7847618 |
gctctgatagtgacacgggaaaagggatatgcttacttatttagttttgtataagaaaaccattgtttatgatgtaaaagaaagtattttcaaaagaaaa |
7847519 |
T |
|
| Q |
273 |
ggattcaatgttaatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaattttt |
372 |
Q |
| |
|
||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| |||| || |
|
|
| T |
7847518 |
agattcggtgttaatattattataattttcaaggaagtgaaatgtgaattatgtttgctatgagtcaatgtggtatcttaaatcttgtggaaaaattctt |
7847419 |
T |
|
| Q |
373 |
atattaatagaaaggtttttatttgacactc |
403 |
Q |
| |
|
|||||| | || ||||||||||||||||| |
|
|
| T |
7847418 |
atattagtttgaaagtttttatttgacactc |
7847388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 173 - 405
Target Start/End: Original strand, 27122611 - 27122834
Alignment:
| Q |
173 |
gctctgatggtgacactaggaagggaatatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaa |
272 |
Q |
| |
|
|||||||| |||| ||| |||| || ||||||||||||||||||||||||| |||| || |||||||||| | ||||||||||||| || ||||||||| |
|
|
| T |
27122611 |
gctctgatagtgaaactgggaaagggatatgcttacttatttagttttgtacaagaaaactattttctatgttgtaaaagaaagtatattgaaaagcaaa |
27122710 |
T |
|
| Q |
273 |
ggattcaatgttaatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaattttt |
372 |
Q |
| |
|
|||||| |||||| ||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| || |
|
|
| T |
27122711 |
ggattcgatgtta---------taattttcaaagaagtgaaatgtgaattatgtttgttatgagtcaatgtggtatcctaaatcttgtgggagaattctt |
27122801 |
T |
|
| Q |
373 |
atattaatagaaaggtttttatttgacactctc |
405 |
Q |
| |
|
||||| |||| || ||||||||||||||||||| |
|
|
| T |
27122802 |
atatttataggaaagtttttatttgacactctc |
27122834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 173 - 400
Target Start/End: Original strand, 31475561 - 31475788
Alignment:
| Q |
173 |
gctctgatggtgacactaggaagggaatatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaa |
272 |
Q |
| |
|
|||||||| ||||||| | || || ||||||||||||||||| ||||||| |||| ||||||| | |||| ||| ||||| |||||||||||||||| |
|
|
| T |
31475561 |
gctctgatagtgacacgggaaaagggatatgcttacttatttaattttgtacaagaaaatcattgcttgtgatgtaatagaaattattttcaaaagcaaa |
31475660 |
T |
|
| Q |
273 |
ggattcaatgttaatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaattttt |
372 |
Q |
| |
|
||||||||||||||||||| ||||||| | ||||| ||||| |||||||||||||||||||||||| || |||||||||||||| |||||||| || |
|
|
| T |
31475661 |
agattcaatgttaatattataataattttcaaggaagggaaatttgaattatgtttgttatgagtcaatctgatatcctaaatcttgcagaagaattctt |
31475760 |
T |
|
| Q |
373 |
atattaatagaaaggtttttatttgaca |
400 |
Q |
| |
|
||||||||||||| |||||||||||||| |
|
|
| T |
31475761 |
atattaatagaaaagtttttatttgaca |
31475788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 173 - 400
Target Start/End: Original strand, 31495397 - 31495624
Alignment:
| Q |
173 |
gctctgatggtgacactaggaagggaatatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaa |
272 |
Q |
| |
|
|||||||| ||||||| | || || ||||||||||||||||| ||||||| |||| ||||||| | |||| ||| ||||| |||||||||||||||| |
|
|
| T |
31495397 |
gctctgatagtgacacgggaaaagggatatgcttacttatttaattttgtacaagaaaatcattgcttgtgatgtaatagaaattattttcaaaagcaaa |
31495496 |
T |
|
| Q |
273 |
ggattcaatgttaatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaattttt |
372 |
Q |
| |
|
||||||||||||||||||| ||||||| | ||||| ||||| |||||||||||||||||||||||| ||| |||||||||||||| ||||||| || |
|
|
| T |
31495497 |
agattcaatgttaatattataataattttcaaggaagggaaatttgaattatgtttgttatgagtcaatgtgatatcctaaatcttgcaaaagaattctt |
31495596 |
T |
|
| Q |
373 |
atattaatagaaaggtttttatttgaca |
400 |
Q |
| |
|
||||||||||||| |||||||||||||| |
|
|
| T |
31495597 |
atattaatagaaaagtttttatttgaca |
31495624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 173 - 400
Target Start/End: Original strand, 31500783 - 31501010
Alignment:
| Q |
173 |
gctctgatggtgacactaggaagggaatatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaa |
272 |
Q |
| |
|
|||||||| ||||||| | || || ||||||||||||||||| ||||||| |||| ||||||| | |||| ||| ||||| |||||||||||||||| |
|
|
| T |
31500783 |
gctctgatagtgacacgggaaaagggatatgcttacttatttaattttgtacaagaaaatcattgcttgtgatgtaatagaaattattttcaaaagcaaa |
31500882 |
T |
|
| Q |
273 |
ggattcaatgttaatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaattttt |
372 |
Q |
| |
|
||||||||||||||||||| ||||||| | ||||| ||||| |||||||||||||||||||||||| ||| |||||||||||||| ||||||| || |
|
|
| T |
31500883 |
agattcaatgttaatattataataattttcaaggaagggaaatttgaattatgtttgttatgagtcaatgtgatatcctaaatcttgcaaaagaattctt |
31500982 |
T |
|
| Q |
373 |
atattaatagaaaggtttttatttgaca |
400 |
Q |
| |
|
||||||||||||| |||||||||||||| |
|
|
| T |
31500983 |
atattaatagaaaagtttttatttgaca |
31501010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 173 - 405
Target Start/End: Complemental strand, 34486763 - 34486531
Alignment:
| Q |
173 |
gctctgatggtgacactaggaagggaatatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaa |
272 |
Q |
| |
|
|||||||| |||||||||| || || |||| |||||||||||| |||| | |||| || ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
34486763 |
gctctgatagtgacactagaaaagggatatacttacttatttacttttatgcaagaaaaccattttctatgatgtaaaagaaagtattttcaaaagcaaa |
34486664 |
T |
|
| Q |
273 |
ggattcaatgttaatattattgtaatttttagggaagtg-aaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttt |
371 |
Q |
| |
|
|||||| || |||||||| || ||||||| | ||||||| ||||||| |||||||| |||||||||| || |||||||||||||||||| |||||| | |
|
|
| T |
34486663 |
ggattcgatattaatattgttataattttcaaggaagtgtctatgtgaactatgtttgctatgagtcaatgttgtatcctaaatcttgtgggagaattct |
34486564 |
T |
|
| Q |
372 |
tatattaatagaaaggtttttatttgacactctc |
405 |
Q |
| |
|
||||||||||| || | |||||||| |||||||| |
|
|
| T |
34486563 |
tatattaatagcaaag-ttttattttacactctc |
34486531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 199 - 400
Target Start/End: Complemental strand, 14744782 - 14744578
Alignment:
| Q |
199 |
atatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaaggattcaatgttaatattattgtaat |
298 |
Q |
| |
|
||||||||||||||||||||||||| |||| || |||| |||||||| |||| ||||||||||| ||||||||| ||| || |||||| |||| ||| |
|
|
| T |
14744782 |
atatgcttacttatttagttttgtacaagataaccattatctatgatgtaaaggaaagtatttt-aaaagcaaattatttgattttaatagtattaaaat |
14744684 |
T |
|
| Q |
299 |
ttttagggaagtgaaatgtgaattatgtttgtt----atgagtcaacgtggtatcctaaatcttgtggaagaatttttatattaatagaaaggtttttat |
394 |
Q |
| |
|
||||| |||||||||||||||||||||||| || ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
14744683 |
ttttaaggaagtgaaatgtgaattatgttttttttttatgagtcaatgtggtatcctaaattttgtggaagaattcttatattaatagaaaagtttttat |
14744584 |
T |
|
| Q |
395 |
ttgaca |
400 |
Q |
| |
|
|||||| |
|
|
| T |
14744583 |
ttgaca |
14744578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 173 - 402
Target Start/End: Original strand, 22397272 - 22397502
Alignment:
| Q |
173 |
gctctgatggtgacactaggaagggaatatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaa |
272 |
Q |
| |
|
|||||||| ||||||| | || || |||||||||||||||| |||||||| |||| || | || |||||||| |||||| ||||||||||||||||||| |
|
|
| T |
22397272 |
gctctgatagtgacacgggaaaagggatatgcttacttatttcgttttgtacaagaaaacctttgtctatgatgtaaaagcaagtattttcaaaagcaaa |
22397371 |
T |
|
| Q |
273 |
ggattcaatgttaatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaattttt |
372 |
Q |
| |
|
||||| ||| |||||||||| ||||||||| |||||||||| |||||||||||||||||| |||||||| ||||||||||||| |||||||||| | |
|
|
| T |
22397372 |
agattcgatgataatattattataatttttaatgaagtgaaatctgaattatgtttgttatgtttcaacgtgatatcctaaatcttatggaagaattcat |
22397471 |
T |
|
| Q |
373 |
atattaataga-aaggtttttatttgacact |
402 |
Q |
| |
|
|||| | |||| || ||||||||||||||| |
|
|
| T |
22397472 |
atatcattagagaaaatttttatttgacact |
22397502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 173 - 400
Target Start/End: Original strand, 31515286 - 31515514
Alignment:
| Q |
173 |
gctctgatggtgacactaggaagggaatatgcttacttattt-agttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaa |
271 |
Q |
| |
|
|||||||| ||||||| | || || |||||||||||| ||| | ||||||| |||| ||||||| | |||| ||| ||||| ||||||||||||||| |
|
|
| T |
31515286 |
gctctgatagtgacacgggaaaagggatatgcttactttttttaattttgtacaagaaaatcattgcttgtgatgtaatagaaattattttcaaaagcaa |
31515385 |
T |
|
| Q |
272 |
aggattcaatgttaatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttt |
371 |
Q |
| |
|
| ||||||||||||||||||| ||||||| | ||||| ||||| |||||||||||||||||||||||| ||| |||||||||||||| ||||||| | |
|
|
| T |
31515386 |
aagattcaatgttaatattataataattttcaaggaagggaaatttgaattatgtttgttatgagtcaatgtgatatcctaaatcttgcaaaagaattct |
31515485 |
T |
|
| Q |
372 |
tatattaatagaaaggtttttatttgaca |
400 |
Q |
| |
|
|||||||||||||| |||||||||||||| |
|
|
| T |
31515486 |
tatattaatagaaaagtttttatttgaca |
31515514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 173 - 399
Target Start/End: Complemental strand, 8885308 - 8885085
Alignment:
| Q |
173 |
gctctgatggtgacactaggaagggaatatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagta-ttttcaaaagcaa |
271 |
Q |
| |
|
||||| || ||||||| || ||| ||||||||||||||||||| ||||||| || | || |||| |||||||| |||||||||||| |||| |||||||| |
|
|
| T |
8885308 |
gctctaatagtgacacgagaaagagaatatgcttacttatttaattttgtacaaaaaaaccattgtctatgatgtaaaagaaagtatttttgaaaagcaa |
8885209 |
T |
|
| Q |
272 |
aggattcaatgttaatattattgtaatttttagggaagtgaaatgtga-attatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaattt |
370 |
Q |
| |
|
| |||| |||||||||| ||| ||||||| | |||||||||| | || |||||||||||||| ||| ||| |||||||||||||||||||||||| |
|
|
| T |
8885208 |
aagatttgatgttaatatgattataattttcaaggaagtgaaa-gcgatattatgtttgttataagt----gtgatatcctaaatcttgtggaagaattc |
8885114 |
T |
|
| Q |
371 |
ttatattaatagaaaggtttttatttgac |
399 |
Q |
| |
|
|||||||| || ||| ||||||||||||| |
|
|
| T |
8885113 |
ttatattattaaaaaagtttttatttgac |
8885085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 115; Significance: 3e-58; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 199 - 405
Target Start/End: Complemental strand, 6820570 - 6820364
Alignment:
| Q |
199 |
atatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaaggattcaatgttaatattattgtaat |
298 |
Q |
| |
|
||||||||||||||||||||||||| |||| || |||| | |||||| ||||||||| |||||||||||| ||| ||||| |||||||||||||| |||| |
|
|
| T |
6820570 |
atatgcttacttatttagttttgtataagaaaaccattgtttatgatgtaaaagaaaatattttcaaaagaaaaagattcgatgttaatattattataat |
6820471 |
T |
|
| Q |
299 |
ttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttttatattaatagaaaggtttttatttga |
398 |
Q |
| |
|
||| | |||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||| |||||||||| || |||||||||||| |
|
|
| T |
6820470 |
tttcaaagaagtgaaatgtgaattatgtttgctatgtgtcaatgtggtatcctaaatcttgtggaaaaattcttatattaatttgaaagtttttatttga |
6820371 |
T |
|
| Q |
399 |
cactctc |
405 |
Q |
| |
|
||||||| |
|
|
| T |
6820370 |
cactctc |
6820364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 199 - 401
Target Start/End: Complemental strand, 17417802 - 17417600
Alignment:
| Q |
199 |
atatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaaggattcaatgttaatattattgtaat |
298 |
Q |
| |
|
||||||||| |||||| |||||||| |||| || ||| | |||||| |||||||||||||||||||||||||| |||| |||||||||||||| |||| |
|
|
| T |
17417802 |
atatgcttaattatttcgttttgtacaagaaaactattgtatatgatgtaaaagaaagtattttcaaaagcaaaagatttgatgttaatattattataat |
17417703 |
T |
|
| Q |
299 |
ttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttttatattaatagaaaggtttttatttga |
398 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |||| | |||||||||||| |
|
|
| T |
17417702 |
atttaatgaagtgaaatatgaattatgtttgttatgagtcaatgtgatatcctaaatcttgtggaagaattcctatattattagagaagtttttatttga |
17417603 |
T |
|
| Q |
399 |
cac |
401 |
Q |
| |
|
||| |
|
|
| T |
17417602 |
cac |
17417600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 173 - 394
Target Start/End: Original strand, 19729294 - 19729515
Alignment:
| Q |
173 |
gctctgatggtgacactaggaagggaatatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaa |
272 |
Q |
| |
|
|||||||| ||||||| | || || |||||||||||||||| |||||||| || | || |||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
19729294 |
gctctgatagtgacacgggaaaagggatatgcttacttatttcgttttgtacaaaaaaaccattgactatgatgtaaaagaaagtattttcaaaagcaaa |
19729393 |
T |
|
| Q |
273 |
ggattcaatgttaatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaattttt |
372 |
Q |
| |
|
||||| || ||||| |||| ||||||| |||||||| | || ||||||||||||||||||||| ||| |||||||||||||||||||||||| | |
|
|
| T |
19729394 |
agattcgatattaatgctattacgatttttaatgaagtgaagtctggattatgtttgttatgagtcaatgtgatatcctaaatcttgtggaagaattcct |
19729493 |
T |
|
| Q |
373 |
atattaatagaaaggtttttat |
394 |
Q |
| |
|
|||||| |||| | |||||||| |
|
|
| T |
19729494 |
atattattagagaagtttttat |
19729515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 182 - 378
Target Start/End: Original strand, 3577142 - 3577329
Alignment:
| Q |
182 |
gtgacactaggaagggaatatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaaggattcaat |
281 |
Q |
| |
|
||||||||||||| || |||| ||||||||||||| |||||| |||| || |||||||||||| |||||||||||||||||||||||| | ||||| || |
|
|
| T |
3577142 |
gtgacactaggaaagggatattcttacttatttagctttgtataagaaaactattttctatgatgtaaaagaaagtattttcaaaagcacatgattcgat |
3577241 |
T |
|
| Q |
282 |
gttaatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttttatatta |
378 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||| ||||||||||| || ||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
3577242 |
gtta---------taatttttaaagaagtgaaatgtgaattatctttgttatgaggtaatgtgatatcctaaatcttgtggaagaattcttatatta |
3577329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289 (Bit Score: 111; Significance: 7e-56; HSPs: 1)
Name: scaffold0289
Description:
Target: scaffold0289; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 173 - 405
Target Start/End: Original strand, 10438 - 10673
Alignment:
| Q |
173 |
gctctgatggtgacactaggaagggaatatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaa |
272 |
Q |
| |
|
|||||||| |||||||| |||| || |||| |||||||||||| ||||| |||| |||||||||||||||| ||||||||||||||||||||||| || |
|
|
| T |
10438 |
gctctgatagtgacactgggaaagggatatacttacttatttaattttgcgcaagaaaatcattttctatgatgtaaaagaaagtattttcaaaagccaa |
10537 |
T |
|
| Q |
273 |
ggattcaatgttaatattattgt---aatttttagggaagtgaa-atgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaat |
368 |
Q |
| |
|
| |||| |||||||||||||| | |||||| | ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
10538 |
g-attcgatgttaatattattattataattttcaaggaagtgtttatgtgaattatgtctgttatgagtcaatgtggtatcctaaatcttgtgggagaat |
10636 |
T |
|
| Q |
369 |
ttttatattaatagaaaggtttttatttgacactctc |
405 |
Q |
| |
|
| ||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
10637 |
tcttaaattaatagaaaagtttttatttgacactctc |
10673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 111; Significance: 7e-56; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 202 - 396
Target Start/End: Original strand, 39528063 - 39528257
Alignment:
| Q |
202 |
tgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaaggattcaatgttaatattattgtaatttt |
301 |
Q |
| |
|
||||||||||||||||||| || |||| || ||||||||||||| |||||||||||||||||||||| ||| ||||| |||||||||||||| ||| ||| |
|
|
| T |
39528063 |
tgcttacttatttagttttatataagaaaaccattttctatgatgtaaaagaaagtattttcaaaagtaaatgattcgatgttaatattattataagttt |
39528162 |
T |
|
| Q |
302 |
tagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttttatattaatagaaaggtttttattt |
396 |
Q |
| |
|
| ||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||| ||| ||||| ||||| |||||||| |||||||||| |
|
|
| T |
39528163 |
caaggaagtgaaatatgaattatgtttgttatgagttaatgtgttatcctaaatcttgtagaataatttctatatcaatagaaatgtttttattt |
39528257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 173 - 402
Target Start/End: Complemental strand, 23906987 - 23906758
Alignment:
| Q |
173 |
gctctgatggtgacactaggaagggaatatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaa |
272 |
Q |
| |
|
|||||||| ||||||| | || || |||||||||||||||| ||||||| |||| || |||| |||||||||||||| ||||||||||||||| ||| |
|
|
| T |
23906987 |
gctctgatagtgacacgggaaaagggatatgcttacttatttcattttgtacaagaaaaccattgtctatgatttaaaatgaagtattttcaaaagaaaa |
23906888 |
T |
|
| Q |
273 |
ggattcaatgttaatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaattttt |
372 |
Q |
| |
|
|||||||||||||||||| | ||||||||| |||||||||| |||||||||||||||||||||||| ||| | |||||||||||||||||||||| | |
|
|
| T |
23906887 |
agattcaatgttaatattactataatttttaatgaagtgaaatctgaattatgtttgttatgagtcaatgtgatctcctaaatcttgtggaagaattcct |
23906788 |
T |
|
| Q |
373 |
atattaatagaaaggtttttatttgacact |
402 |
Q |
| |
|
|||| | |||| | |||||||||||||||| |
|
|
| T |
23906787 |
atatcattagagaagtttttatttgacact |
23906758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 202 - 384
Target Start/End: Original strand, 23248102 - 23248284
Alignment:
| Q |
202 |
tgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaaggattcaatgttaatattattgtaatttt |
301 |
Q |
| |
|
||||||||| ||||||||| || |||| || |||| ||||| | |||||||||||||||||||||||||| ||||| ||||||||| |||| |||||| |
|
|
| T |
23248102 |
tgcttacttgtttagttttttacaagataaccattatctatattgtaaaagaaagtattttcaaaagcaaaagattcgatgttaatagtattacaatttt |
23248201 |
T |
|
| Q |
302 |
tagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttttatattaatagaa |
384 |
Q |
| |
|
| ||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
23248202 |
caaggaagtgaaatgtgaattatgttcgttatgaatcaatgtggtatcctaaatcttgtgaaagaattcttatattaatagaa |
23248284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 333
Target Start/End: Complemental strand, 22520933 - 22520799
Alignment:
| Q |
199 |
atatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaaggattcaatgttaatattattgtaat |
298 |
Q |
| |
|
||||||||||||||||||||||||| |||| || |||| | |||||| |||||||||||| ||||||||||||| ||||| |||||||||||||| |||| |
|
|
| T |
22520933 |
atatgcttacttatttagttttgtacaagaaaaccattatttatgatataaaagaaagtactttcaaaagcaaaagattcgatgttaatattattataat |
22520834 |
T |
|
| Q |
299 |
ttttagggaagtgaaatgtgaattatgtttgttat |
333 |
Q |
| |
|
||| | | |||||||| ||||||||||||||||| |
|
|
| T |
22520833 |
tttcaagagagtgaaatatgaattatgtttgttat |
22520799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 257 - 378
Target Start/End: Original strand, 20186248 - 20186369
Alignment:
| Q |
257 |
tattttcaaaagcaaaggattcaatgttaatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatc |
356 |
Q |
| |
|
|||||||||||||||| | | |||||||||||||| ||||||| | ||||||||||| |||||||| |||||||||| |||| ||| ||||||| ||| |
|
|
| T |
20186248 |
tattttcaaaagcaaaatacttgatgttaatattattataattttcaaggaagtgaaatctgaattatatttgttatgattcaatgtgatatcctacatc |
20186347 |
T |
|
| Q |
357 |
ttgtggaagaatttttatatta |
378 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
20186348 |
ttgtggaagaatttttatatta |
20186369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 305 - 405
Target Start/End: Original strand, 35923333 - 35923434
Alignment:
| Q |
305 |
ggaagtgaaatgtgaattatgtttgtt-atgagtcaacgtggtatcctaaatcttgtggaagaatttttatattaatagaaaggtttttatttgacactc |
403 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||| | ||| |||||||||||| |||| |||||| ||||||||||||||| | ||||||||||||||| |
|
|
| T |
35923333 |
ggaagtgaaatgtgaattatgtttttttatgagtctatgtgatatcctaaatctagtgggagaattcttatattaatagaaatgcttttatttgacactc |
35923432 |
T |
|
| Q |
404 |
tc |
405 |
Q |
| |
|
|| |
|
|
| T |
35923433 |
tc |
35923434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 405
Target Start/End: Complemental strand, 22524480 - 22524361
Alignment:
| Q |
285 |
aatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttttatattaatagaa |
384 |
Q |
| |
|
||||||||| | ||||| | ||||||||||| |||||||||||||||||||||| ||| |||||| ||||| ||||| |||| |||||||| ||| | |
|
|
| T |
22524480 |
aatattattatcattttcaaggaagtgaaatctgaattatgtttgttatgagtcggtgtgatatcct-gatcttatggaaaaattcttatattattagga |
22524382 |
T |
|
| Q |
385 |
aggtttttatttgacactctc |
405 |
Q |
| |
|
| |||||||||||||| |||| |
|
|
| T |
22524381 |
aagtttttatttgacattctc |
22524361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 23247197 - 23247258
Alignment:
| Q |
202 |
tgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttc |
263 |
Q |
| |
|
||||||||| |||||||||||| |||| || |||| ||||| || ||||||||||||||||| |
|
|
| T |
23247197 |
tgcttacttgtttagttttgtacaagataaccattatctataatgtaaaagaaagtattttc |
23247258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 173 - 393
Target Start/End: Original strand, 17863093 - 17863318
Alignment:
| Q |
173 |
gctctgatggtgacactaggaagggaatatgcttacttatttagttttgta-----aaagagaatcattttctatgatttaaaagaaagtattttcaaaa |
267 |
Q |
| |
|
|||||||||||||||| | || || |||||||||||||||| |||||||| ||| | || |||| ||||||| ||||||||||||||||||||| |
|
|
| T |
17863093 |
gctctgatggtgacacgggaaaagggatatgcttacttatttcgttttgtacaaaaaaaaaaaaccattgactatgatgtaaaagaaagtattttcaaaa |
17863192 |
T |
|
| Q |
268 |
gcaaaggattcaatgttaatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaa |
367 |
Q |
| |
|
||||| ||||| |||||||||||||| | ||||||| |||||||| | |||||||||||||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
17863193 |
gcaaaagattcgatgttaatattattatgatttttaatgaagtgaagtctgaattatgtttgttatgagtcaatgtgatatcctaaatcttgtggaagaa |
17863292 |
T |
|
| Q |
368 |
tttttatattaatagaaaggttttta |
393 |
Q |
| |
|
|| ||||||| |||| | ||||||| |
|
|
| T |
17863293 |
ttcctatattattagagaagttttta |
17863318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 199 - 402
Target Start/End: Original strand, 11283976 - 11284173
Alignment:
| Q |
199 |
atatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaaggattcaatgttaatattattgtaat |
298 |
Q |
| |
|
||||||||||||||||||||||||| ||| || |||| |||||||| |||||||||||||||||| ||||||| ||||||||||| |||||||| |||| |
|
|
| T |
11283976 |
atatgcttacttatttagttttgtacaaggaaaccattgtctatgatgtaaaagaaagtattttcataagcaaaagattcaatgttcatattattataat |
11284075 |
T |
|
| Q |
299 |
ttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttttatattaatagaaaggtttttatttga |
398 |
Q |
| |
|
||| | ||||||||||| || ||||||| |||||||| ||| |||||||||| ||||||||||||| |||||||| | ||| |||||||||||| |
|
|
| T |
11284076 |
tttcaaggaagtgaaatttgtattatgt------tgagtcaatgtgatatcctaaattttgtggaagaattcttatattatcataaaagtttttatttga |
11284169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 204 - 400
Target Start/End: Original strand, 18989 - 19188
Alignment:
| Q |
204 |
cttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaaggattcaatgttaatattattgtaattttta |
303 |
Q |
| |
|
|||||||||||||||||||| |||| || |||| |||||||| ||||||| |||||||||||||||||| |||| ||||| ||| |||| |||||| | |
|
|
| T |
18989 |
cttacttatttagttttgtacaagataaccattatctatgatgtaaaagagagtattttcaaaagcaaaagatttgatgttgatagtattacaattttca |
19088 |
T |
|
| Q |
304 |
gggaagtgaaatgtgaattatg---tttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttttatattaatagaaaggtttttatttgaca |
400 |
Q |
| |
|
|||||||||||||||||||| ||| |||| |||||| ||| |||||||||| ||||||||||||| ||| ||||||||| | |||||||||||||| |
|
|
| T |
19089 |
aagaagtgaaatgtgaattatggttttttttataagtcaatgtgatatcctaaattttgtggaagaattcttaaattaatagacaagtttttatttgaca |
19188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 199 - 394
Target Start/End: Complemental strand, 141456 - 141260
Alignment:
| Q |
199 |
atatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttc-aaaagcaaaggattcaatgttaatattattgtaa |
297 |
Q |
| |
|
|||||||||||||||| |||||||| || | || |||| ||||||| |||||||||||||||| ||||||||| ||||| |||| ||| ||||| | | |
|
|
| T |
141456 |
atatgcttacttatttcgttttgtacaaaaaaaacattgactatgatgtaaaagaaagtattttttaaaagcaaaagattcgatgtcaatgttattatga |
141357 |
T |
|
| Q |
298 |
tttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttttatattaatagaaaggtttttat |
394 |
Q |
| |
|
|||||| |||||||| | |||||||||||||||||||||||| ||| ||| |||||| ||||||||||||| ||||||| |||||| |||||||| |
|
|
| T |
141356 |
tttttaatgaagtgaagtctgaattatgtttgttatgagtcaatgtgatatactaaattttgtggaagaattcctatattattagaaaagtttttat |
141260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1043 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold1043
Description:
Target: scaffold1043; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 199 - 394
Target Start/End: Original strand, 2293 - 2490
Alignment:
| Q |
199 |
atatgcttacttatttagttttgta--aaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaaggattcaatgttaatattattgta |
296 |
Q |
| |
|
|||||||||||||||| ||||||| ||| | || |||| | ||||| |||||||||||||||||||||||||| ||||| || ||||| ||||| | |
|
|
| T |
2293 |
atatgcttacttatttcattttgtacaaaaaaaaaccattgaccatgatgtaaaagaaagtattttcaaaagcaaaagattcgattttaatgttattatg |
2392 |
T |
|
| Q |
297 |
atttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttttatattaatagaaaggtttttat |
394 |
Q |
| |
|
||||||| |||||||| | |||||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||||||| |||| | |||||||| |
|
|
| T |
2393 |
atttttaatgaagtgaagtctgaattatgtttgttacgagtcaatgtgatatcctaaatcttgtggaagaattcctatattattagagaagtttttat |
2490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0042 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0042
Description:
Target: scaffold0042; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 177 - 405
Target Start/End: Original strand, 60185 - 60411
Alignment:
| Q |
177 |
tgatggtgacactaggaagggaatatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagta-ttttcaaaagcaaagga |
275 |
Q |
| |
|
|||| |||||||||||||||| |||| |||||||||||| |||||| |||| || ||||||||||||| |||||||||||| |||| |||||||||||| |
|
|
| T |
60185 |
tgatagtgacactaggaaggggatatacttacttatttacttttgtgtaagaaaaccattttctatgatgtaaaagaaagtattttttaaaagcaaagga |
60284 |
T |
|
| Q |
276 |
ttcaatgttaatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttttata |
375 |
Q |
| |
|
||| |||||||||||||| ||||||| | || | |||||| |||||||| ||||||||||| |||| |||||||||||| | |||||| ||||| |
|
|
| T |
60285 |
ttcgatgttaatattattataattttcaaggtgtt--tatgtgagttatgtttattatgagtcaatttggtgtcctaaatcttgaaggagaattcttata |
60382 |
T |
|
| Q |
376 |
ttaatagaaaggtttttatttgacactctc |
405 |
Q |
| |
|
|| |||| || | |||||||| |||||||| |
|
|
| T |
60383 |
ttcatagcaaag-ttttattttacactctc |
60411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 79; Significance: 8e-37; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 202 - 385
Target Start/End: Original strand, 3090147 - 3090331
Alignment:
| Q |
202 |
tgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaaggattcaatgttaatattattgtaatttt |
301 |
Q |
| |
|
|||||||||||||||||||||| |||| || |||| |||||||| |||||||||||||||||||||||||| |||| ||||||||| |||| |||||| |
|
|
| T |
3090147 |
tgcttacttatttagttttgtacaagataaccattatctatgatgtaaaagaaagtattttcaaaagcaaaagatttgatgttaatagtattacaatttt |
3090246 |
T |
|
| Q |
302 |
tagggaagtgaaatgtgaattatgtttgttatgagtcaacgtgg--tatcctaaatcttgtggaagaatttttatattaatagaaa |
385 |
Q |
| |
|
| ||||| |||||||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
3090247 |
caaagaagtaaaatgtgaattatg-acattatgagtcaatatggtatatcctaaatcttgtggaagaattcatatattaatagaaa |
3090331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 280 - 402
Target Start/End: Original strand, 16074888 - 16075010
Alignment:
| Q |
280 |
atgttaatattattgtaatttttagggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttttatattaa |
379 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
16074888 |
atgttaatattattataatttttaatgaagtgaaatctgagttatgtttgttatgagtcaatgtgatatcctaaatcttgtggaagaattcctatattat |
16074987 |
T |
|
| Q |
380 |
tagaaaggtttttatttgacact |
402 |
Q |
| |
|
|||| | |||||||| ||||||| |
|
|
| T |
16074988 |
tagagaagtttttatctgacact |
16075010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 206 - 373
Target Start/End: Original strand, 5046252 - 5046419
Alignment:
| Q |
206 |
tacttatttagttttgtaaaag-agaatcattttctatgatttaaaagaaagtattttcaaaagcaaaggattcaatgttaatattattgtaatttttag |
304 |
Q |
| |
|
||||||||||||| |||| ||| | ||| |||||||||||| ||| | ||| |||| |||||| ||||| | | |||| |||||||| || |||||| |
|
|
| T |
5046252 |
tacttatttagttatgtacaaggaaaattattttctatgatgtaacaaaaattattctcaaaatcaaagtaattgttgttgatattattttattttttaa |
5046351 |
T |
|
| Q |
305 |
ggaagtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaattttta |
373 |
Q |
| |
|
||||||||| |||| ||||| ||||||| ||||||| |||| ||| |||| ||||| || |||||||| |
|
|
| T |
5046352 |
ggaagtgaattgtggattat-tttgttacgagtcaatgtggaatcttaaaccttgttaaataattttta |
5046419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 8794995 - 8795091
Alignment:
| Q |
309 |
gtgaaatgtgaattatgtttgttatgagtcaacgtggtatcctaaatcttgtggaagaatttttatattaatagaaaggtttttatttgacactctc |
405 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8794995 |
gtgaaatgtgaattatgtttgttatgagttaatgtggtatcctaaattttgtgggagaatttttatattaatagaaaggtttttatttgacattctc |
8795091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 293
Target Start/End: Complemental strand, 19019033 - 19018914
Alignment:
| Q |
174 |
ctctgatggtgacactaggaagggaatatgcttacttatttagttttgtaaaagagaatcattttctatgatttaaaagaaagtattttcaaaagcaaag |
273 |
Q |
| |
|
||||||| ||||||| | || || ||||||||||||||||||||||||| ||| || ||| | |||||| |||||||||||||||| ||||| ||| |
|
|
| T |
19019033 |
ctctgatagtgacacgggaaaagggatatgcttacttatttagttttgtactagaaaacaattgtttatgatgtaaaagaaagtatttttaaaagtaaaa |
19018934 |
T |
|
| Q |
274 |
gattcaatgttaatattatt |
293 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
19018933 |
atttcgatgttaatattatt |
19018914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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