View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19089_low_14 (Length: 268)
Name: NF19089_low_14
Description: NF19089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19089_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 45347793 - 45348043
Alignment:
| Q |
1 |
ttgatggaagacctcctcggacttctaaggatccacattaagcgtggcgtcaacctcgccgttcgtgatgttaatactagtgatccatatgccgtcgtta |
100 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45347793 |
ttgatggaagacctcctcggacttctaaggatccgcattaagcgtggcgtcaacctcgccgttcgtgatgttaatactagtgatccatatgccgtcgtta |
45347892 |
T |
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| Q |
101 |
agatgggcaagcaggttatctttctatttccatcatcctaagttccttcctttgattttatctatatttatgtgcagtgcatatatgtattatgtagtaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
45347893 |
agatgggcaagcaggttatctttctatttccatcatcctaagttccttcctttgattttatctatatttatgtgcagtgcatgtatgtattatgtagtaa |
45347992 |
T |
|
| Q |
201 |
tgattctcagcttgagagctataaataaatatgtacattaccataccatgt |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
45347993 |
tgattctcagcttgagagctataaataaatatgtacattaccatatcatgt |
45348043 |
T |
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