View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1908_high_2 (Length: 288)
Name: NF1908_high_2
Description: NF1908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1908_high_2 |
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Alignment Details
Target: chr6 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 16 - 277
Target Start/End: Original strand, 1216164 - 1216425
Alignment:
| Q |
16 |
cattcagttttggttataaaccaaactttgaggagggagggagggttcaacaagaaaacctaatgttttgttttgtcgcttcagatatggaagtagatcc |
115 |
Q |
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| T |
1216164 |
cattcagttttggttataaaccaaactttgaggagggagggagggttcaacaagaaaacctaatgttttgttttgtcgcttcagatatggaagtagatcc |
1216263 |
T |
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| Q |
116 |
aaaagatttaaaacgcaaagtacaatttgaggagggagtgttcaacaagaaacctcgccttctaatatttcatttaaggtagtacaaaaatactaatatg |
215 |
Q |
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| T |
1216264 |
aaaagatttaaaacgcagagtacaatttgaggagggagtgttcaacaagaaacctcgccttctaacatttcgtttaaggtagtacaaaaatactaatatg |
1216363 |
T |
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| Q |
216 |
ttatgcgttcttaaagaagcatatgcttatataaacatgtacttatgtacgtatgcattcat |
277 |
Q |
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| T |
1216364 |
ttatgcgttcttaaagaagcatatgcttatataaacatgtacttacgtacgtatgcattcat |
1216425 |
T |
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