View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19090_high_2 (Length: 277)
Name: NF19090_high_2
Description: NF19090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19090_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 21 - 261
Target Start/End: Original strand, 43519909 - 43520149
Alignment:
| Q |
21 |
ctctacattaagtagaacattgtttagtnnnnnnnnnnnnntcatgagtcattagataattaaaacttccaaaagtatgaaagtttaaattttgtcattt |
120 |
Q |
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| T |
43519909 |
ctctacattaagtagaacattgtttagtaaaaattaaaaaatcatgagtcattagataattaaaacttccaaaagtatgaaagtataaattttgtcattt |
43520008 |
T |
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| Q |
121 |
ccccaatccaacaacttcaccttatcgtttaacaaatacaagaattgcaaataagaaacaatcttatggaaatgaaatgaaataaagattgcatgtgtgt |
220 |
Q |
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| T |
43520009 |
ccccaatccaacaacttcaccttatcgtttaacaaatacaagaattgcaaatatgaaacaatcttatggaaatgaaatgaaataaagattgcatgtgtgt |
43520108 |
T |
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| Q |
221 |
ttattcaaaaacaatcaatctgtagaaaacaacaataaaaa |
261 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
43520109 |
ttattcaaaaacaatcaatctgtagaaaacaacaataaaaa |
43520149 |
T |
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