View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19092_low_15 (Length: 266)
Name: NF19092_low_15
Description: NF19092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19092_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 18 - 248
Target Start/End: Complemental strand, 35417805 - 35417575
Alignment:
| Q |
18 |
attataacttactcctccttcctacaaatcccatatttgtttatttttgttgctaaaactatttgccaacaaactcataccttcctcttattctcttgtt |
117 |
Q |
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| T |
35417805 |
attataacttactcctccttcctacaaatcccatatttgtttatttttgttgctaaaactatttgccaacaaactcataccttcctcttattctcttgtt |
35417706 |
T |
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| Q |
118 |
ttttccttcatttccacttcttcctacaccaataaccgaaagctcaatctcaactactcattcaaattcaaacccttctcttcaaatgttggaactaaag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35417705 |
ttttccttcatttccacttcttcctacaccaataaccgaaagctcaatctcaactactcattcaaattcaaacccttctcttcaaatgttggaactaaag |
35417606 |
T |
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| Q |
218 |
actcccctcaagaacaaaggattctatgtta |
248 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
35417605 |
actcccctcaagaacaaaggattctatgtta |
35417575 |
T |
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