View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19093_low_9 (Length: 407)
Name: NF19093_low_9
Description: NF19093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19093_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 350; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 40 - 389
Target Start/End: Original strand, 50613158 - 50613507
Alignment:
| Q |
40 |
aataaataaagaaatgagccattttacaattgtttaactatggctacagcaatatctatgaacctttgtagttttttatttaaagcacttaaagatattg |
139 |
Q |
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| T |
50613158 |
aataaataaagaaatgagccattttacaattgtttaactatggctacagcaatatctatgaacctttgtagttttttatttaaagcacttaaagatattg |
50613257 |
T |
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| Q |
140 |
aaccacgtccagttgagtttttgatttgcctgttgcaacggccaatttcccctttaataaatatcaatttttcaccgaccaactcatatcttttttggtt |
239 |
Q |
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| T |
50613258 |
aaccacgtccagttgagtttttgatttgcctgttgcaacggccaatttcccctttaataaatatcaatttttcaccgaccaactcatatcttttttggtt |
50613357 |
T |
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| Q |
240 |
agtaaaatcaattattgatctaatatagtaatccactaatgaaccgtaagtcttagcacaactaacgaatttttggcgcaattcaatatctttggtttca |
339 |
Q |
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| T |
50613358 |
agtaaaatcaattattgatctaatatagtaatccactaatgaaccgtaagtcttagcacaactaacgaatttttggcgcaattcaatatctttggtttca |
50613457 |
T |
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| Q |
340 |
atggcaaaacgttgagcataaatcaatcttttagtggctcttgctagaat |
389 |
Q |
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| T |
50613458 |
atggcaaaacgttgagcataaatcaatcttttagtggctcttgctagaat |
50613507 |
T |
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