View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19095_low_10 (Length: 365)
Name: NF19095_low_10
Description: NF19095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19095_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 20 - 349
Target Start/End: Complemental strand, 35255064 - 35254743
Alignment:
| Q |
20 |
atgtggcaagttatgcatatggagatgtctataatggtatgacgacattcacatatgactcttttatttaaagatttcattaacatgtatatatgcatgc |
119 |
Q |
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| T |
35255064 |
atgtagcaagttatgcatatggagatgtctataatggtatgaccacattcacatatgactcttttatttaaagatttcattaacatgtatataagcat-- |
35254967 |
T |
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| Q |
120 |
attaatgttaataatgatttacacttgcaaaagtgcaaagtaaaggctacaaccacattgcagctaggttggtcacaattagtatatatatcatatctta |
219 |
Q |
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| T |
35254966 |
--taatgttaataatgatttacacttgcaaaagtgcaaagtaaaggctacaaccacattgcagctaggttggtcacaattagtatat----catatctta |
35254873 |
T |
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| Q |
220 |
ttaagagcagcaagaattaaaacagtgactgaagtgattcctggaatgaaaaattcatttggaattgcttgaggccccactctttgcttaacaaacagag |
319 |
Q |
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| T |
35254872 |
ttaagagcagcaagaattaaaacagtgactgaagtgattcctggaatgaaaaattcatttggaattgcttgaggccccactctttgcttaacaaacagag |
35254773 |
T |
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| Q |
320 |
cagtcacaggaacaccaaagatgtagaaga |
349 |
Q |
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| T |
35254772 |
cagtcacaggaacaccaaagatgtacaaga |
35254743 |
T |
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