View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19095_low_6 (Length: 605)
Name: NF19095_low_6
Description: NF19095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19095_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 585; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 585; E-Value: 0
Query Start/End: Original strand, 1 - 593
Target Start/End: Complemental strand, 10465685 - 10465093
Alignment:
| Q |
1 |
tttttgtcccgtcacgtagttcattttactaggcagtagaaacttcttcatcactggagaattttgagctgaactatgattttttgcatggaattataca |
100 |
Q |
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| T |
10465685 |
tttttgtcccgtcacgtagttcattttactaggcagtagaaacttcttcatcactggagaattttgagctgaactatgattttttgcatggaattataca |
10465586 |
T |
|
| Q |
101 |
ggtcgtcagggaattgcaacattcaagaaatggtgttacggtgatcacggaagatggttgtgtttacgaagccaattatgtgattctgtccgttagcatt |
200 |
Q |
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| T |
10465585 |
ggtcgtcagggaattgcaacattcaagaaatggtgttacggtgatcacggaagatggttgtgtttacgaagccaattatgtgattctgtccgttagcatt |
10465486 |
T |
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| Q |
201 |
ggcgttctccaaagtgacctacttgccttcaatccacccttaccagtacgttttctcaatacatgttcttctcctttatttactctaaggagccccgtgt |
300 |
Q |
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| T |
10465485 |
ggcgttctccaaagtgacctacttgccttcaatccacccttaccagtacgttttctcaatacatattcttctcctttatttactctaaggagccccgtgt |
10465386 |
T |
|
| Q |
301 |
aatcaagcaagctagccgtagaatattgtatgatgtgggatgcatttattggtcccggatatgtggacacctcgtgcttctcacgctgatattttttaag |
400 |
Q |
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| T |
10465385 |
aatcaagcaagctagccgtagaatattgtatgatgtgggatgcatttattggtcccggatatgtggacacctcgtgcttctcacgctgatattttttaag |
10465286 |
T |
|
| Q |
401 |
ctcattcattaatttgagaacttgccaccaacatggtgaaaatggaatctctaggtgttgttctttctgtctatacatacgggtcactacagcaggaatt |
500 |
Q |
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| T |
10465285 |
ctcattcattaatttgagaacttgccaccaacatggtgaaaatggaatctctaggtgtggttctttctgtctatacatacgggtcactacagcaggaatt |
10465186 |
T |
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| Q |
501 |
tcccttttgtggcccccaagtcttaaatattattggttgggaatgtaaagaaatgtagggatagctaggttttgtattaaatttgaggagtat |
593 |
Q |
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| T |
10465185 |
tcccttttgtggcccccaagtcttaaatattattggttgggaatgtaaagaaatgtagggatagctaggttttgtattaaatttgaggagtat |
10465093 |
T |
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