View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19097_high_21 (Length: 418)
Name: NF19097_high_21
Description: NF19097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19097_high_21 |
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Alignment Details
Target: chr1 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 11 - 400
Target Start/End: Original strand, 33454820 - 33455209
Alignment:
| Q |
11 |
cagagaaccaccttataccgcaattaaagttttaattgatggaaataagaacaagataaaacgtttccacattgcatcttcacaattttaacttgatcaa |
110 |
Q |
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| T |
33454820 |
cagagaaccaccttataccgcaattaaagttttaattgatggaaataagaacaagataaaacgtttccacattgcatcttcacaatttttacttgatcaa |
33454919 |
T |
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| Q |
111 |
ggaatatgtagacaaccaaagcaatcagtgtgcattgtataataccttccttaaaaacctatttatgcattttaactctcttgcttaaatgaaaatctta |
210 |
Q |
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| T |
33454920 |
ggaatatgtagacaaccaaagcaatatgtgtgcattgtataataccttccttaaaaacctatttatgcattttaactctcttgcttaaatgaaaatctta |
33455019 |
T |
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| Q |
211 |
gaggcctaatgatgtactgacaatatcataaatgaaagcagaactcgatcaaaaagtatcaacgacattttcttcagtcttacaaatttcctttgtaaga |
310 |
Q |
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| T |
33455020 |
gaggcctaatgatgtactgacaatatcataaatgaaagcaggactcgatcaaaaagtatcaacgacattttcttcagtcttacaaattttctttgtaaga |
33455119 |
T |
|
| Q |
311 |
cctctcgtgttaagtcaaaactgaacctgcttctttagagtaaatatgacattactccgaatagaaccttttgtaatttatactgcatgc |
400 |
Q |
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| T |
33455120 |
cctctcgtgttaagtcaaaactgaacctgcttctttagagtaaatatgacattactccgaatagaaccttttgtaatttatactgcatgc |
33455209 |
T |
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