View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19097_high_39 (Length: 332)
Name: NF19097_high_39
Description: NF19097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19097_high_39 |
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Alignment Details
Target: chr1 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 28733584 - 28733900
Alignment:
| Q |
1 |
tcatttgcaagatagtgctgtggctgagttgaaggcaagattattggagagagagacaaaactacaaaatataactgaagagaacaatacacttaagatg |
100 |
Q |
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| T |
28733584 |
tcatttgcaagatagtgatgtggctgagttgaaggcaagattattggagagagagacaaaactacaaaatataactgaagagaacaatacacttaagatg |
28733683 |
T |
|
| Q |
101 |
gaaataaagagagaggagttagagaagaataaaatcatggatgaggctgttgcttccgctgaggcagcaagggccgcggagcgagaggctttgacaaaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28733684 |
gaaataaagagagaggagttagagaagaataaaatcatggatgaggctgttgcttccgctgaggcagcaagggccgcggagcgagaggctttgacaaaac |
28733783 |
T |
|
| Q |
201 |
tcagctacataacagaagaagctgatgaaagtaaccgaatgataacacgtgtaactgaggagttagatactgcacaggcgtcaaatttggaattagaggc |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
28733784 |
tcagctacataacagaagaagctgatgaaagtaaccgaatgataacacgtgtaactgaggagttagatactgcacaggcgtcaaatttggagttagaggc |
28733883 |
T |
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| Q |
301 |
tgaattaaggagattga |
317 |
Q |
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||||||||||||||||| |
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| T |
28733884 |
tgaattaaggagattga |
28733900 |
T |
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