View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19097_high_49 (Length: 282)
Name: NF19097_high_49
Description: NF19097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19097_high_49 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 13 - 282
Target Start/End: Original strand, 38330935 - 38331210
Alignment:
| Q |
13 |
aatataatacgagcattccaagaccataaacacaatccaatannnnnnn------ggtagatcaatccaatattttttattgagtaaaaaagaaaatagt |
106 |
Q |
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| T |
38330935 |
aatataatacgagcattccaagaccataaacgcaatccaatatatatatttttttggtagatcaatccaatattttttattgagtaaaaaagaaaatagt |
38331034 |
T |
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| Q |
107 |
ggtaatatattcgacaaggtgacgatgcacaatagttctccaaagtttactattttaaatctaaacaaatgcaacattgacagtggtggaaacacttttt |
206 |
Q |
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| T |
38331035 |
ggtaatatattcgacaaggtgacgatgcacaatagttctccaaagtttactattttaaatctaaacaaatgcaacattgacagtggtggaaacacttttt |
38331134 |
T |
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| Q |
207 |
acggaacaatattcgaacactcgtcactcgtatatacttgtatattttttccggtatctatgagtataaacaactt |
282 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38331135 |
acggaacaatattcgaacactcatcactcgtatatacttgtatattttttccggtatctatgagtataaacaactt |
38331210 |
T |
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